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Aliases for ENSG00000228421 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000228421 Gene

  • AC005013.5 5

External Ids for ENSG00000228421 Gene

Summaries for ENSG00000228421 Gene

GeneCards Summary for ENSG00000228421 Gene

ENSG00000228421 is an RNA Gene. Diseases associated with ENSG00000228421 include Retinitis Pigmentosa 11.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000228421 Gene

Genomics for ENSG00000228421 Gene

Regulatory Elements for ENSG00000228421 Gene

Enhancers for ENSG00000228421 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G028955 1 ENCODE 26.9 -0.1 -52 4.2 ZFP64 ARID4B DMAP1 ZNF2 ZNF48 YY1 TCF12 SLC30A9 GLIS2 ZNF143 ENSG00000228421 LOC107986703 ENSG00000233517 GC07P028823
GH07G028932 1 Ensembl ENCODE 12.2 -24.4 -24390 2.4 ELF3 MXI1 FOXA2 SAP130 ARID4B BMI1 ZNF121 FOXK2 ZBTB48 ZNF143 ENSG00000228421 LOC107986703 ENSG00000233517 GC07P028823
GH07G028926 1.1 Ensembl ENCODE 9.4 -30.5 -30490 1.2 ELF3 CTCF PKNOX1 SAP130 MAX RAD21 RFX5 E2F1 ZNF366 ZNF143 LOC107986703 ENSG00000233517 ENSG00000228421 GC07P028823
GH07G028986 0.8 Ensembl ENCODE 12 +29.1 29091 1.4 PBX2 CEBPA HLF CEBPB CEBPG EP300 ENSG00000228421 ENSG00000233517 LOC100506497
GH07G028981 0.5 ENCODE 11.9 +23.7 23695 0.8 ZNF217 MBD2 CTBP1 GATA3 RFX1 ENSG00000228421 LOC107986703 LOC100506497 ENSG00000233517
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000228421 on UCSC Golden Path with GeneCards custom track

Promoters for ENSG00000228421 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000210156 733 401 SOX5 SOX13 RNF2 CHD1 REST NR2F2 NR2F6 FOXP2 EZH2

Genomic Location for ENSG00000228421 Gene

Chromosome:
7
Start:
28,957,667 bp from pter
End:
28,959,345 bp from pter
Size:
1,679 bases
Orientation:
Plus strand

Genomic View for ENSG00000228421 Gene

Genes around ENSG00000228421 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228421 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228421 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228421 Gene

Proteins for ENSG00000228421 Gene

Post-translational modifications for ENSG00000228421 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228421 Gene

Domains & Families for ENSG00000228421 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000228421 Gene

Function for ENSG00000228421 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228421 Gene

Localization for ENSG00000228421 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000228421 Gene

Pathways & Interactions for ENSG00000228421 Gene

SuperPathways for ENSG00000228421 Gene

No Data Available

Interacting Proteins for ENSG00000228421 Gene

Gene Ontology (GO) - Biological Process for ENSG00000228421 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228421 Gene

Drugs & Compounds for ENSG00000228421 Gene

No Compound Related Data Available

Transcripts for ENSG00000228421 Gene

mRNA/cDNA for ENSG00000228421 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228421 Gene

No ASD Table

Relevant External Links for ENSG00000228421 Gene

GeneLoc Exon Structure for
ENSG00000228421

Expression for ENSG00000228421 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000228421 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000228421 Gene

This gene is overexpressed in Brain - Amygdala (x4.5), Brain - Caudate (basal ganglia) (x4.2), and Brain - Nucleus accumbens (basal ganglia) (x4.1).
genes like me logo Genes that share expression patterns with ENSG00000228421: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228421 Gene

Orthologs for ENSG00000228421 Gene

Evolution for ENSG00000228421 Gene

ENSEMBL:
Gene Tree for ENSG00000228421 (if available)
TreeFam:
Gene Tree for ENSG00000228421 (if available)

No data available for Orthologs for ENSG00000228421 Gene

Paralogs for ENSG00000228421 Gene

No data available for Paralogs for ENSG00000228421 Gene

Variants for ENSG00000228421 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000228421 Gene

Disorders for ENSG00000228421 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ENSG00000228421 Gene - From: DISEASES

Disorder Aliases PubMed IDs
retinitis pigmentosa 11
  • rp11
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with ENSG00000228421: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228421 Gene

Publications for ENSG00000228421 Gene

No publications were found for ENSG00000228421 Gene.

Products for ENSG00000228421 Gene

Sources for ENSG00000228421 Gene

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