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Aliases for ENSG00000228170 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000228170 Gene

  • RP1-40E16.11 5

External Ids for ENSG00000228170 Gene

Previous GeneCards Identifiers for ENSG00000228170 Gene

  • GC06M003139
  • GC06M003140

Summaries for ENSG00000228170 Gene

GeneCards Summary for ENSG00000228170 Gene

ENSG00000228170 is an RNA Gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000228170 Gene

Genomics for ENSG00000228170 Gene

Regulatory Elements for ENSG00000228170 Gene

Enhancers for ENSG00000228170 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G002979 2.1 FANTOM5 Ensembl ENCODE dbSUPER 9.9 +166.9 166943 13.6 CREB3L1 MLX AGO1 DMAP1 FEZF1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 RIPK1 ENSG00000272320 NQO2 PSMG4 LOC105374888 SERPINB9 SERPINB6 ENSG00000232999 WRNIP1 ENSG00000228170
GH06G003246 1.8 VISTA FANTOM5 Ensembl ENCODE 11.3 -95.1 -95093 3.1 ATF1 FOXA2 MLX ZFP64 DMAP1 ZNF48 CBX5 FOS SP5 ZHX2 TUBB2A TUBB2B ENSG00000228170 BPHL SLC22A23 PIR45758
GH06G003207 1.7 FANTOM5 Ensembl ENCODE 10.9 -56.0 -56029 3.2 PKNOX1 ARNT SIN3A SLC30A9 ZNF766 FOS KLF13 ZNF263 SP3 ZHX2 TUBB2B PSMG4 TUBB2A BPHL ENSG00000228170 SERPINB9 GC06P003208 GC06P003221
GH06G003125 1.5 Ensembl ENCODE dbSUPER 11.6 +26.9 26925 1.7 ATF1 MLX ARID4B SIN3A DMAP1 ZNF2 ZNF48 YY1 SLC30A9 ELK1 TUBB2B TUBB2A ENSG00000228170 PSMG4 BPHL GC06P003150
GH06G003117 1.4 ENCODE dbSUPER 11.6 +33.7 33739 3.6 HNRNPUL1 HDGF ARNT MLX CREB3L1 AGO1 ZFP64 ARID4B SIN3A DMAP1 TUBB2A ENSG00000228170 PSMG4 TUBB2B TUBB2BP1 BPHL GC06P003150
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000228170 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000228170 Gene

Chromosome:
6
Start:
3,138,394 bp from pter
End:
3,153,062 bp from pter
Size:
14,669 bases
Orientation:
Minus strand

Genomic View for ENSG00000228170 Gene

Genes around ENSG00000228170 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228170 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228170 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228170 Gene

Proteins for ENSG00000228170 Gene

Post-translational modifications for ENSG00000228170 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228170 Gene

Domains & Families for ENSG00000228170 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000228170 Gene

Function for ENSG00000228170 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228170 Gene

Localization for ENSG00000228170 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000228170 Gene

Pathways & Interactions for ENSG00000228170 Gene

SuperPathways for ENSG00000228170 Gene

No Data Available

Interacting Proteins for ENSG00000228170 Gene

Gene Ontology (GO) - Biological Process for ENSG00000228170 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228170 Gene

Drugs & Compounds for ENSG00000228170 Gene

No Compound Related Data Available

Transcripts for ENSG00000228170 Gene

mRNA/cDNA for ENSG00000228170 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228170 Gene

No ASD Table

Relevant External Links for ENSG00000228170 Gene

GeneLoc Exon Structure for
ENSG00000228170

Expression for ENSG00000228170 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000228170 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000228170 Gene

This gene is overexpressed in Liver (x6.2) and Kidney - Cortex (x4.6).
genes like me logo Genes that share expression patterns with ENSG00000228170: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228170 Gene

Orthologs for ENSG00000228170 Gene

Evolution for ENSG00000228170 Gene

ENSEMBL:
Gene Tree for ENSG00000228170 (if available)
TreeFam:
Gene Tree for ENSG00000228170 (if available)

No data available for Orthologs for ENSG00000228170 Gene

Paralogs for ENSG00000228170 Gene

No data available for Paralogs for ENSG00000228170 Gene

Variants for ENSG00000228170 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000228170 Gene

Disorders for ENSG00000228170 Gene

No disorders were found for ENSG00000228170 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228170 Gene

Publications for ENSG00000228170 Gene

No publications were found for ENSG00000228170 Gene.

Products for ENSG00000228170 Gene

Sources for ENSG00000228170 Gene

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