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ENSG00000228005 Gene(RNA Gene)

 

GCID:
GC07M050181
GIFtS:
12
Genes Participants
UDN Logo

Aliases for ENSG00000228005 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000228005 Gene

  • AC020743.2 5

External Ids for ENSG00000228005 Gene

Summaries for ENSG00000228005 Gene

GeneCards Summary for ENSG00000228005 Gene

ENSG00000228005 is an RNA Gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000228005 Gene

Genomics for ENSG00000228005 Gene

Products:

  1. Regulatory Element

Regulatory Elements for ENSG00000228005 Gene

Enhancers for ENSG00000228005 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G050304 3.2 VISTA FANTOM5 Ensembl ENCODE dbSUPER 11.6 -170.9 -170917 19.2 HDGF PKNOX1 CREB3L1 ARNT WRNIP1 SIN3A ZNF766 CBX5 FOS KLF13 IKZF1 ENSG00000228005 GC07P050382
GH07G050382 2.3 VISTA dbSUPER 11.3 -239.3 -239291 0.8 ATF1 CREB3L1 E2F7 ARID4B SIN3A DMAP1 ZNF48 ZNF2 TCF12 GLIS2 RNU6-1091P ENSG00000228005 ZPBP C7orf72 GC07P050382 IKZF1
GH07G050341 2 FANTOM5 Ensembl ENCODE dbSUPER 12.2 -213.0 -212975 28.8 HDGF PKNOX1 CREB3L1 ARNT WRNIP1 ZNF2 ZNF766 CBX5 ZNF143 FOS IKZF1 FIGNL1 ENSG00000228005 ZPBP GC07P050382
GH07G050409 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.5 -267.8 -267768 3.0 FOXA2 ELK1 ZNF143 RELB IKZF2 CREM CBFB GATAD2B TBX21 MAFF FIGNL1 RNU6-1091P ENSG00000228005 ZPBP IKZF1 GC07P050435 GC07P050382
GH07G050205 1.4 FANTOM5 Ensembl ENCODE 12.2 -64.2 -64173 3.2 HDAC1 CBX3 NFIB ARNT DEAF1 RAD21 CHAMP1 CBX5 ZNF366 ZNF143 IKZF1 ENSG00000228005 ENSG00000231681
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000228005 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000228005 Gene

Chromosome:
7
Start:
50,141,540 bp from pter
End:
50,142,823 bp from pter
Size:
1,284 bases
Orientation:
Minus strand

Genomic View for ENSG00000228005 Gene

Genes around ENSG00000228005 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228005 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228005 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000228005 Gene

Proteins for ENSG00000228005 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000228005 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228005 Gene

Domains & Families for ENSG00000228005 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000228005 Gene

Function for ENSG00000228005 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228005 Gene

Localization for ENSG00000228005 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000228005 Gene

Pathways & Interactions for ENSG00000228005 Gene

SuperPathways for ENSG00000228005 Gene

PathCards logo More details on SuperPathways for ENSG00000228005
No Data Available

Interacting Proteins for ENSG00000228005 Gene

Gene Ontology (GO) - Biological Process for ENSG00000228005 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228005 Gene

Drugs & Compounds for ENSG00000228005 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000228005 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for ENSG00000228005 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228005 Gene

No ASD Table

Relevant External Links for ENSG00000228005 Gene

GeneLoc Exon Structure for
ENSG00000228005

Expression for ENSG00000228005 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000228005 Gene

mRNA expression in normal human tissues for ENSG00000228005 Gene
mRNA expression by GTEx for ENSG00000228005 Gene
genes like me logo Genes that share expression patterns with ENSG00000228005: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228005 Gene

Orthologs for ENSG00000228005 Gene

Evolution for ENSG00000228005 Gene

ENSEMBL:
Gene Tree for ENSG00000228005 (if available)
TreeFam:
Gene Tree for ENSG00000228005 (if available)

No data available for Orthologs for ENSG00000228005 Gene

Paralogs for ENSG00000228005 Gene

No data available for Paralogs for ENSG00000228005 Gene

Variants for ENSG00000228005 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000228005 Gene

Disorders for ENSG00000228005 Gene

No disorders were found for ENSG00000228005 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228005 Gene

Publications for ENSG00000228005 Gene

No publications were found for ENSG00000228005 Gene.

Products for ENSG00000228005 Gene

Sources for ENSG00000228005 Gene

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