Aliases for ENSG00000227885 Gene
Quality Score for this RNA gene is
1
Aliases for ENSG00000227885 Gene
- AL590652.1 5
External Ids for ENSG00000227885 Gene
- Ensembl: ENSG00000227885
Previous GeneCards Identifiers for ENSG00000227885 Gene
- GC06M053605
Summaries for ENSG00000227885 Gene
GeneCards Summary for ENSG00000227885 Gene
ENSG00000227885 is an RNA Gene.
Additional gene information for ENSG00000227885 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000227885 Gene
Genomics for ENSG00000227885 Gene
GeneHancer (GH) Regulatory Elements for ENSG00000227885 Gene
Promoters and enhancers for ENSG00000227885 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH06I053746 | Enhancer | 0.5 | ENCODE | 550.8 | +0.2 | 199 | 0.8 | SIX4 ZNF217 GATAD2A FOXA2 FOXA3 NR2F6 | ENSG00000227885 KLHL31 | |
| GH06I053791 | Promoter/Enhancer | 2.5 | EPDnew FANTOM5 Ensembl ENCODE dbSUPER | 4.8 | -47.8 | -47846 | 5.8 | FOXA2 SMAD1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 SLC30A9 KLF13 SP3 | LRRC1 ENSG00000228614 KLHL31 MLIP-IT1 ENSG00000227885 PIR32511 | |
| GH06I053743 | Enhancer | 0.7 | ENCODE | 9.5 | +2.4 | 2405 | 1.3 | CLOCK NFIB NEUROD1 PAX8 CTBP1 GATA3 E2F8 RCOR1 TCF7L2 SMARCE1 | LRRC1 ENSG00000228614 ENSG00000227885 KLHL31 | |
| GH06I053809 | Enhancer | 1.1 | Ensembl ENCODE dbSUPER | 5.7 | -63.9 | -63937 | 2.5 | PKNOX1 SAP130 BACH1 SIN3A EBF1 ZIC2 TEAD3 ZNF366 ATF7 FOS | LOC101927189 MLIP ENSG00000227885 LRRC1 PIR32511 | |
| GH06I053751 | Enhancer | 0.6 | ENCODE | 9 | -5.9 | -5909 | 2.1 | JUND GATA3 JUN STAT3 CEBPB FOS CEBPG EP300 | MLIP-IT1 ENSG00000227885 KLHL31 LRRC1 ENSG00000228614 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around ENSG00000227885 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for ENSG00000227885 Gene
Genomic Locations for ENSG00000227885 Gene
- chr6:53,740,749-53,747,022
- (GRCh38/hg38)
- Size:
- 6,274 bases
- Orientation:
- Minus strand
- chr6:53,605,547-53,611,820
- (GRCh37/hg19)
Genomic View for ENSG00000227885 Gene
Genes around ENSG00000227885 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 6p12.1 by Ensembl
ENSG00000227885 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
No data available for RefSeq DNA sequence for ENSG00000227885 Gene
Proteins for ENSG00000227885 Gene
Post-translational modifications for ENSG00000227885 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for ENSG00000227885
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ENSG00000227885
- Origene Custom Protein Services for ENSG00000227885
- Search GeneTex for Proteins for ENSG00000227885
No data available for DME Specific Peptides for ENSG00000227885 Gene
Domains & Families for ENSG00000227885 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000227885 Gene
Function for ENSG00000227885 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for ENSG00000227885
-
- Search ViGene Biosciences for ENSG00000227885
CRISPR Products
- Browse CRISPR knockouts for ENSG00000227885
miRNA Products
- Search ViGene Biosciences for ENSG00000227885
Inhibitory RNA Products
- Search ViGene Biosciences for ENSG00000227885
Clone Products
- GenScript: Custom all cDNA clones Services for ENSG00000227885
- VectorBuilder custom plasmid, inducible vectors for ENSG00000227885
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ENSG00000227885
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227885 Gene
Localization for ENSG00000227885 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000227885 Gene
Transcripts for ENSG00000227885 Gene
mRNA/cDNA for ENSG00000227885 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for ENSG00000227885
miRNA Products
- Search ViGene Biosciences for ENSG00000227885
Inhibitory RNA Products
- Search ViGene Biosciences for ENSG00000227885
Clone Products
- GenScript: Custom all cDNA clones Services for ENSG00000227885
- VectorBuilder custom plasmid, inducible vectors for ENSG00000227885
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ENSG00000227885
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Relevant External Links for ENSG00000227885 Gene
- GeneLoc Exon Structure for
- ENSG00000227885
Expression for ENSG00000227885 Gene
mRNA differential expression in normal tissues according to GTEx for ENSG00000227885 Gene
This gene is overexpressed in Thyroid (x4.6).
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227885 Gene
Orthologs for ENSG00000227885 Gene
Evolution for ENSG00000227885 Gene
- ENSEMBL:
- Gene Tree for ENSG00000227885 (if available)
- TreeFam:
- Gene Tree for ENSG00000227885 (if available)
No data available for Orthologs for ENSG00000227885 Gene
Paralogs for ENSG00000227885 Gene
No data available for Paralogs for ENSG00000227885 Gene
Variants for ENSG00000227885 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000227885 Gene
Disorders for ENSG00000227885 Gene
No disorders were found for ENSG00000227885 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227885 Gene
Publications for ENSG00000227885 Gene
No publications were found for ENSG00000227885 Gene.
Products for ENSG00000227885 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ENSG00000227885
- Origene Custom Protein Services for ENSG00000227885
- Browse OriGene Inhibitory RNA Products For ENSG00000227885
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for ENSG00000227885
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ENSG00000227885
- GenScript: Custom all cDNA clones Services for ENSG00000227885
- GenScript Custom Purified and Recombinant Proteins Services for ENSG00000227885
- GenScript Custom Assay Services for ENSG00000227885
- GenScript Custom overexpressing Cell Line Services for ENSG00000227885
- Browse GenScript CRISPR for ENSG00000227885
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for ENSG00000227885
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Recombinant Proteins
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- Sino Biological Transfection Reagent
- Sino Biological Anti-His Tag Antibody
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Browse Antibodies at Cloud-Clone Corp.
- Browse Proteins at Cloud-Clone Corp.
- Browse Assay Kits at Cloud-Clone Corp.
- Browse Knockouts at Cloud-Clone Corp.
- Browse Knockins at Cloud-Clone Corp.
- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for ENSG00000227885
- VectorBuilder custom plasmid, inducible vectors for ENSG00000227885
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ENSG00000227885
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for ENSG00000227885
- Search GeneTex for Proteins for ENSG00000227885
Sources for ENSG00000227885 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew