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Aliases for ENSG00000227885 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000227885 Gene

  • RP11-79N23.1 5

External Ids for ENSG00000227885 Gene

Previous GeneCards Identifiers for ENSG00000227885 Gene

  • GC06M053605

Summaries for ENSG00000227885 Gene

GeneCards Summary for ENSG00000227885 Gene

ENSG00000227885 is an RNA Gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000227885 Gene

Genomics for ENSG00000227885 Gene

Regulatory Elements for ENSG00000227885 Gene

Enhancers for ENSG00000227885 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G053791 1.6 FANTOM5 ENCODE dbSUPER 4.8 -47.8 -47847 5.8 HNRNPUL1 FOXA2 ARID4B SIN3A FEZF1 DMAP1 ZNF2 SLC30A9 ZNF207 ZNF263 LRRC1 KLHL31 MLIP-IT1 ENSG00000227885 PIR32511
GH06G053809 1.3 Ensembl ENCODE dbSUPER 5.7 -63.9 -63938 2.5 PKNOX1 SAP130 BACH1 SIN3A EBF1 ZIC2 TEAD3 ZNF366 FOSL2 FOS LOC101927189 MLIP ENSG00000227885 LRRC1 PIR32511
GH06G053743 0.7 ENCODE 9.5 +2.4 2406 1.3 FOXA2 NFIB PAX8 RAD21 CTBP1 GATA3 RCOR1 TCF7L2 HCFC1 DPF2 LRRC1 ENSG00000228614 ENSG00000227885 KLHL31
GH06G053751 0.7 ENCODE 9 -5.9 -5910 2.1 SOX13 CTCF JUN ZIC2 YY1 GATA3 GATA2 TRIM24 FOS CEBPB MLIP-IT1 ENSG00000227885 KLHL31 LRRC1 ENSG00000228614
GH06G053718 0.7 ENCODE 7.4 +27.9 27873 1.3 CTCF PKNOX1 RAD21 RFX5 SCRT2 SMC3 ZNF143 DEK SCRT1 RFX1 KLHL31 ENSG00000227885
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000227885 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000227885 Gene

Chromosome:
6
Start:
53,740,749 bp from pter
End:
53,747,022 bp from pter
Size:
6,274 bases
Orientation:
Minus strand

Genomic View for ENSG00000227885 Gene

Genes around ENSG00000227885 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227885 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227885 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000227885 Gene

Proteins for ENSG00000227885 Gene

Post-translational modifications for ENSG00000227885 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227885 Gene

Domains & Families for ENSG00000227885 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000227885 Gene

Function for ENSG00000227885 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227885 Gene

Localization for ENSG00000227885 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000227885 Gene

Pathways & Interactions for ENSG00000227885 Gene

SuperPathways for ENSG00000227885 Gene

No Data Available

Interacting Proteins for ENSG00000227885 Gene

Gene Ontology (GO) - Biological Process for ENSG00000227885 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000227885 Gene

Drugs & Compounds for ENSG00000227885 Gene

No Compound Related Data Available

Transcripts for ENSG00000227885 Gene

mRNA/cDNA for ENSG00000227885 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227885 Gene

No ASD Table

Relevant External Links for ENSG00000227885 Gene

GeneLoc Exon Structure for
ENSG00000227885

Expression for ENSG00000227885 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000227885 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000227885 Gene

This gene is overexpressed in Thyroid (x4.6).
genes like me logo Genes that share expression patterns with ENSG00000227885: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227885 Gene

Orthologs for ENSG00000227885 Gene

Evolution for ENSG00000227885 Gene

ENSEMBL:
Gene Tree for ENSG00000227885 (if available)
TreeFam:
Gene Tree for ENSG00000227885 (if available)

No data available for Orthologs for ENSG00000227885 Gene

Paralogs for ENSG00000227885 Gene

No data available for Paralogs for ENSG00000227885 Gene

Variants for ENSG00000227885 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000227885 Gene

Disorders for ENSG00000227885 Gene

No disorders were found for ENSG00000227885 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227885 Gene

Publications for ENSG00000227885 Gene

No publications were found for ENSG00000227885 Gene.

Products for ENSG00000227885 Gene

Sources for ENSG00000227885 Gene

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