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Aliases for ENSG00000227880 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000227880 Gene

  • RP11-46E17.6 5

External Ids for ENSG00000227880 Gene

Previous GeneCards Identifiers for ENSG00000227880 Gene

  • GC22M027853

Summaries for ENSG00000227880 Gene

GeneCards Summary for ENSG00000227880 Gene

ENSG00000227880 is an RNA Gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000227880 Gene

Genomics for ENSG00000227880 Gene

Regulatory Elements for ENSG00000227880 Gene

Enhancers for ENSG00000227880 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22G027460 1 Ensembl ENCODE 0.7 -1.3 -1324 2.5 CTCF FOXA2 TEAD4 MAX RAD21 YY1 FOS MAFK RFX1 JUND ENSG00000227880 LOC105372981
GH22G027472 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -15.2 -15209 4.9 ELF3 FOXA2 ATF1 RAD21 YY1 ETS1 FOS CREM MIXL1 IKZF1 ENSG00000227880 LOC105372981
GH22G027456 0.9 Ensembl ENCODE 0.7 +2.6 2607 1.7 HLF CEBPB CEBPG NR3C1 ZIC2 JUND GATA2 FOS MAFK NFE2L2 ENSG00000227880 LOC105372980
GH22G027487 1.1 Ensembl ENCODE 0.3 -28.9 -28860 2.0 ELF3 PKNOX1 FOXA2 RAD21 RARA YY1 FOS CREM EGR2 HMG20B ENSG00000227880 LOC105372981
GH22G027435 0.9 Ensembl ENCODE 0.3 +23.7 23714 1.6 ZSCAN4 ELF4 REST ZBTB40 POLR2A HDAC2 FOXP2 KDM1A PRDM1 LOC105372980 ENSG00000227880
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000227880 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000227880 Gene

Chromosome:
22
Start:
27,457,247 bp from pter
End:
27,460,060 bp from pter
Size:
2,814 bases
Orientation:
Minus strand

Genomic View for ENSG00000227880 Gene

Genes around ENSG00000227880 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227880 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227880 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000227880 Gene

Proteins for ENSG00000227880 Gene

Post-translational modifications for ENSG00000227880 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227880 Gene

Domains & Families for ENSG00000227880 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000227880 Gene

Function for ENSG00000227880 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227880 Gene

Localization for ENSG00000227880 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000227880 Gene

Pathways & Interactions for ENSG00000227880 Gene

SuperPathways for ENSG00000227880 Gene

No Data Available

Interacting Proteins for ENSG00000227880 Gene

Gene Ontology (GO) - Biological Process for ENSG00000227880 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000227880 Gene

Drugs & Compounds for ENSG00000227880 Gene

No Compound Related Data Available

Transcripts for ENSG00000227880 Gene

mRNA/cDNA for ENSG00000227880 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227880 Gene

No ASD Table

Relevant External Links for ENSG00000227880 Gene

GeneLoc Exon Structure for
ENSG00000227880

Expression for ENSG00000227880 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000227880 Gene

genes like me logo Genes that share expression patterns with ENSG00000227880: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227880 Gene

Orthologs for ENSG00000227880 Gene

Evolution for ENSG00000227880 Gene

ENSEMBL:
Gene Tree for ENSG00000227880 (if available)
TreeFam:
Gene Tree for ENSG00000227880 (if available)

No data available for Orthologs for ENSG00000227880 Gene

Paralogs for ENSG00000227880 Gene

No data available for Paralogs for ENSG00000227880 Gene

Variants for ENSG00000227880 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000227880 Gene

Disorders for ENSG00000227880 Gene

No disorders were found for ENSG00000227880 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227880 Gene

Publications for ENSG00000227880 Gene

No publications were found for ENSG00000227880 Gene.

Products for ENSG00000227880 Gene

Sources for ENSG00000227880 Gene

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