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Aliases for ENSG00000227838 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000227838 Gene

  • RP1-213J1P__B.1 5

External Ids for ENSG00000227838 Gene

Previous GeneCards Identifiers for ENSG00000227838 Gene

  • GC22M028072

Summaries for ENSG00000227838 Gene

GeneCards Summary for ENSG00000227838 Gene

ENSG00000227838 is an RNA Gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000227838 Gene

Genomics for ENSG00000227838 Gene

Regulatory Elements for ENSG00000227838 Gene

Enhancers for ENSG00000227838 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22G027747 1.3 Ensembl ENCODE dbSUPER 12.7 -34.0 -34023 3.6 CTCF JUN TEAD4 MAX RBBP5 ZIC2 ZFHX2 SMC3 EZH2 L3MBTL2 ENSG00000227838 ENSG00000226169 MN1 GC22P027739
GH22G027783 1.3 Ensembl ENCODE dbSUPER 12.2 -70.6 -70622 4.4 BCOR PKNOX1 CREB3L1 ZMYM3 ZNF384 NFXL1 FEZF1 BCL11B ZNF664 ZNF121 ENSG00000226169 ENSG00000227838 MN1 GC22P027739
GH22G027641 1.2 Ensembl ENCODE dbSUPER 10.7 +73.0 72967 1.7 SOX13 TFAP4 PKNOX1 SAP130 ZIC2 ZNF48 HDAC2 EGR1 PBX2 GABPB1 ENSG00000227838 ENSG00000226169 ENSG00000224027 ENSG00000231495
GH22G027752 1 ENCODE dbSUPER 12.7 -38.4 -38351 2.5 KLF1 KLF17 ZIC2 ZNF664 ZFHX2 GLIS2 PATZ1 EGR2 MAZ ZBTB8A ENSG00000227838 ENSG00000226169 MN1 GC22P027739
GH22G027754 1 ENCODE dbSUPER 12.4 -39.7 -39698 0.2 ZIC2 ZFHX2 GLIS2 ZBTB48 PATZ1 EGR2 ZBTB8A ZEB2 ZSCAN21 OSR2 ENSG00000226169 ENSG00000227838 MN1 GC22P027739
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000227838 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000227838 Gene

Chromosome:
22
Start:
27,676,559 bp from pter
End:
27,714,970 bp from pter
Size:
38,412 bases
Orientation:
Minus strand

Genomic View for ENSG00000227838 Gene

Genes around ENSG00000227838 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227838 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227838 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000227838 Gene

Proteins for ENSG00000227838 Gene

Post-translational modifications for ENSG00000227838 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227838 Gene

Domains & Families for ENSG00000227838 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000227838 Gene

Function for ENSG00000227838 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227838 Gene

Localization for ENSG00000227838 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000227838 Gene

Pathways & Interactions for ENSG00000227838 Gene

SuperPathways for ENSG00000227838 Gene

No Data Available

Interacting Proteins for ENSG00000227838 Gene

Gene Ontology (GO) - Biological Process for ENSG00000227838 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000227838 Gene

Drugs & Compounds for ENSG00000227838 Gene

No Compound Related Data Available

Transcripts for ENSG00000227838 Gene

mRNA/cDNA for ENSG00000227838 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227838 Gene

No ASD Table

Relevant External Links for ENSG00000227838 Gene

GeneLoc Exon Structure for
ENSG00000227838

Expression for ENSG00000227838 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000227838 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000227838 Gene

This gene is overexpressed in Muscle - Skeletal (x40.7).
genes like me logo Genes that share expression patterns with ENSG00000227838: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227838 Gene

Orthologs for ENSG00000227838 Gene

Evolution for ENSG00000227838 Gene

ENSEMBL:
Gene Tree for ENSG00000227838 (if available)
TreeFam:
Gene Tree for ENSG00000227838 (if available)

No data available for Orthologs for ENSG00000227838 Gene

Paralogs for ENSG00000227838 Gene

No data available for Paralogs for ENSG00000227838 Gene

Variants for ENSG00000227838 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000227838 Gene

Disorders for ENSG00000227838 Gene

No disorders were found for ENSG00000227838 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227838 Gene

Publications for ENSG00000227838 Gene

No publications were found for ENSG00000227838 Gene.

Products for ENSG00000227838 Gene

Sources for ENSG00000227838 Gene

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