Aliases for ENSG00000227782 Gene
Subcategory (RNA class) for ENSG00000227782 Gene
antisense
Quality Score for this RNA gene is
1
Aliases for ENSG00000227782 Gene
- CTC-529I10.2 5
External Ids for ENSG00000227782 Gene
- Ensembl: ENSG00000227782
ORGUL Members for ENSG00000227782 Gene
Previous GeneCards Identifiers for ENSG00000227782 Gene
- GC17P015945
- GC17P015946
Summaries for ENSG00000227782 Gene
GeneCards Summary for ENSG00000227782 Gene
ENSG00000227782 is an RNA Gene, and is affiliated with the antisense RNA class.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000227782 Gene
Genomics for ENSG00000227782 Gene
Regulatory Elements for ENSG00000227782 Gene
Enhancers for ENSG00000227782 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH17G016013 | 0.9 | Ensembl ENCODE | 11.1 | -26.1 | -26116 | 1.8 | ZNF263 CTCF PHF8 JUN RAD21 TEAD3 POLR2A IKZF1 SMC3 FOS | ZSWIM7 ENSG00000227782 RPLP1P11 TTC19 GC17M016015 |
| GH17G016150 | 0.6 | ENCODE | 11.5 | +110.1 | 110090 | 0.2 | JUN BHLHE40 EP300 JUND GATA3 GATA2 FOS FOSL2 | RPLP1P11 ENSG00000227782 RNU6-314P NCOR1 GC17P016155 GC17M016137 RNU6-862P |
| GH17G016085 | 0.6 | ENCODE | 11.4 | +45.2 | 45214 | 1.0 | ZNF316 PRDM6 NFE2 MAFK NFE2L2 YY1 | RPLP1P11 ENSG00000227782 RNU6-862P TTC19 IL6STP1 RPL22P21 RNU6-314P |
| GH17G016019 | 0.5 | FANTOM5 | 12.4 | -20.4 | -20396 | 0.4 | MAFK | NCOR1 ENSG00000227782 RPLP1P11 RNU6-314P RNU6-862P TTC19 ZNF286A ZSWIM7 TVP23C GC17M016015 |
| GH17G016121 | 0.5 | ENCODE | 11.3 | +82.4 | 82358 | 2.3 | PAF1 MXI1 POLR2A HMBOX1 EP300 | ZSWIM7 RNU6-314P NCOR1 RPLP1P11 ENSG00000227782 RNU6-862P GC17M016137 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around ENSG00000227782 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for ENSG00000227782 Gene
- Chromosome:
- 17
- Start:
- 16,040,472 bp from pter
- End:
- 16,041,273 bp from pter
- Size:
- 802 bases
- Orientation:
- Plus strand
Genomic View for ENSG00000227782 Gene
Genes around ENSG00000227782 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17p12 by Ensembl
ENSG00000227782 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
No data available for RefSeq DNA sequence for ENSG00000227782 Gene
Proteins for ENSG00000227782 Gene
Post-translational modifications for ENSG00000227782 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for ENSG00000227782
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ENSG00000227782
- Origene Custom Protein Services for ENSG00000227782
- Search GeneTex for Proteins for ENSG00000227782
Assay Products
No data available for DME Specific Peptides for ENSG00000227782 Gene
Domains & Families for ENSG00000227782 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000227782 Gene
Function for ENSG00000227782 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for ENSG00000227782
CRISPR Products
- Browse CRISPR knockouts for ENSG00000227782
miRNA Products
- Search ViGene Biosciences for ENSG00000227782
Inhibitory RNA Products
- Search ViGene Biosciences for ENSG00000227782
Cell Line Products
- Search ViGene Biosciences for ENSG00000227782
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227782 Gene
Localization for ENSG00000227782 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000227782 Gene
Transcripts for ENSG00000227782 Gene
mRNA/cDNA for ENSG00000227782 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for ENSG00000227782
miRNA Products
- Search ViGene Biosciences for ENSG00000227782
Inhibitory RNA Products
- Search ViGene Biosciences for ENSG00000227782
Flow Cytometry Products
Relevant External Links for ENSG00000227782 Gene
- GeneLoc Exon Structure for
- ENSG00000227782
Expression for ENSG00000227782 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227782 Gene
Orthologs for ENSG00000227782 Gene
Evolution for ENSG00000227782 Gene
- ENSEMBL:
- Gene Tree for ENSG00000227782 (if available)
- TreeFam:
- Gene Tree for ENSG00000227782 (if available)
No data available for Orthologs for ENSG00000227782 Gene
Paralogs for ENSG00000227782 Gene
No data available for Paralogs for ENSG00000227782 Gene
Variants for ENSG00000227782 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000227782 Gene
Disorders for ENSG00000227782 Gene
No disorders were found for ENSG00000227782 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227782 Gene
Publications for ENSG00000227782 Gene
No publications were found for ENSG00000227782 Gene.
Products for ENSG00000227782 Gene
- Browse R&D Systems for Antibodies
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- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
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- Custom Antibody Services
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ENSG00000227782
- Origene Custom Protein Services for ENSG00000227782
- Browse OriGene Inhibitory RNA Products For ENSG00000227782
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for ENSG00000227782
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ENSG00000227782
- GenScript: Custom all cDNA clones Services for ENSG00000227782
- GenScript Custom Purified and Recombinant Proteins Services for ENSG00000227782
- GenScript Custom Assay Services for ENSG00000227782
- GenScript Custom overexpressing Cell Line Services for ENSG00000227782
- Browse GenScript CRISPR for ENSG00000227782
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
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- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
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- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for ENSG00000227782
- VectorBuilder custom plasmid, inducible vectors for ENSG00000227782
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ENSG00000227782
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for ENSG00000227782 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer