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Aliases for ENSG00000227671 Gene

Aliases for ENSG00000227671 Gene

  • RP11-488L18.4 5

External Ids for ENSG00000227671 Gene

Previous GeneCards Identifiers for ENSG00000227671 Gene

  • GC01M247353

Summaries for ENSG00000227671 Gene

GeneCards Summary for ENSG00000227671 Gene

ENSG00000227671 is an Uncategorized gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000227671 Gene

Genomics for ENSG00000227671 Gene

Regulatory Elements for ENSG00000227671 Gene

Enhancers for ENSG00000227671 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G246564 1.7 FANTOM5 ENCODE dbSUPER 9.7 +641.3 641294 9.2 HDGF PKNOX1 FOXA2 MLX CREB3L1 ARNT AGO1 WRNIP1 ARID4B SIN3A CNST ZNF670-ZNF695 ENSG00000227671 SMYD3 LINC01341 AHCTF1 ENSG00000225300
GH01G247209 1.1 ENCODE 13.4 -0.1 -93 3.3 HDGF PKNOX1 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 YY1 ZNF766 CBX5 ENSG00000259865 ENSG00000227671 LOC343165
GH01G247856 1 ENCODE 9.7 -646.8 -646790 1.7 HDGF PKNOX1 ATF1 CREB3L1 ARNT SIN3A TCF12 GTF3C2 ZNF766 CBX5 TRIM58 ZNF670-ZNF695 ENSG00000227671 OR2T8 PIR41167
GH01G247110 1.1 ENCODE 5.6 +98.8 98755 2.8 PKNOX1 FOXA2 CREB3L1 ARNT AGO1 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF124 C1orf229 ZNF669 ZNF695 ENSG00000227671
GH01G247457 0.9 FANTOM5 Ensembl dbSUPER 5.1 -246.6 -246631 1.0 ENSG00000235749 ENSG00000236817 NLRP3 OR2B11 ENSG00000227671 OR2W5
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000227671 on UCSC Golden Path with GeneCards custom track

Promoters for ENSG00000227671 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000023189 456 1601 HDGF PKNOX1 ARID4B SIN3A DMAP1 YY1 ZNF143 FOS NFYC REST

Genomic Location for ENSG00000227671 Gene

Chromosome:
1
Start:
247,189,851 bp from pter
End:
247,210,856 bp from pter
Size:
21,006 bases
Orientation:
Minus strand

Genomic View for ENSG00000227671 Gene

Genes around ENSG00000227671 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227671 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227671 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000227671 Gene

Proteins for ENSG00000227671 Gene

Post-translational modifications for ENSG00000227671 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227671 Gene

Domains & Families for ENSG00000227671 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000227671 Gene

Function for ENSG00000227671 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227671 Gene

Localization for ENSG00000227671 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000227671 Gene

Pathways & Interactions for ENSG00000227671 Gene

SuperPathways for ENSG00000227671 Gene

No Data Available

Interacting Proteins for ENSG00000227671 Gene

Gene Ontology (GO) - Biological Process for ENSG00000227671 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000227671 Gene

Drugs & Compounds for ENSG00000227671 Gene

No Compound Related Data Available

Transcripts for ENSG00000227671 Gene

mRNA/cDNA for ENSG00000227671 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227671 Gene

No ASD Table

Relevant External Links for ENSG00000227671 Gene

GeneLoc Exon Structure for
ENSG00000227671

Expression for ENSG00000227671 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227671 Gene

Orthologs for ENSG00000227671 Gene

Evolution for ENSG00000227671 Gene

ENSEMBL:
Gene Tree for ENSG00000227671 (if available)
TreeFam:
Gene Tree for ENSG00000227671 (if available)

No data available for Orthologs for ENSG00000227671 Gene

Paralogs for ENSG00000227671 Gene

No data available for Paralogs for ENSG00000227671 Gene

Variants for ENSG00000227671 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000227671 Gene

Disorders for ENSG00000227671 Gene

No disorders were found for ENSG00000227671 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227671 Gene

Publications for ENSG00000227671 Gene

No publications were found for ENSG00000227671 Gene.

Products for ENSG00000227671 Gene

Sources for ENSG00000227671 Gene

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