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Aliases for ENSG00000227554 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000227554 Gene

  • RP11-444D13.1 5

External Ids for ENSG00000227554 Gene

Summaries for ENSG00000227554 Gene

GeneCards Summary for ENSG00000227554 Gene

ENSG00000227554 is an RNA Gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000227554 Gene

Genomics for ENSG00000227554 Gene

Regulatory Elements for ENSG00000227554 Gene

Enhancers for ENSG00000227554 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G183804 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.2 -51.8 -51778 5.0 PKNOX1 FOXA2 WRNIP1 SIN3A DMAP1 CBX5 ZNF143 ZNF207 ZNF263 JUNB ENSG00000227554 NCF2 ARPC5 GC01M183931
GH01G183841 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.1 -88.1 -88127 3.1 PKNOX1 FOXA2 ARID4B SIN3A FEZF1 DMAP1 ZNF121 GATA2 CBX5 FOS ENSG00000227554 NCF2 GC01M183931
GH01G183869 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10 -117.3 -117274 5.8 PKNOX1 FOXA2 SIN3A DMAP1 FEZF1 ZNF121 CBX5 GATA2 FOS JUNB APOBEC4 ENSG00000227554 RGL1 NCF2 GC01M183931
GH01G183875 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10 -121.9 -121901 2.1 ZNF146 BACH1 ZNF316 EED NFE2 MAFK NFE2L2 RNF2 MAFG JUNB APOBEC4 ENSG00000227554 RGL1 COLGALT2 NMNAT2 GC01M183931
GH01G183942 1.5 Ensembl ENCODE dbSUPER 9.8 -188.3 -188279 1.3 PKNOX1 ATF1 ZNF766 SP3 JUNB REST TSHZ1 TBX21 ZNF518A PBX2 ENSG00000227554 GC01M183940 GC01M183931
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000227554 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000227554 Gene

Chromosome:
1
Start:
183,754,418 bp from pter
End:
183,754,937 bp from pter
Size:
520 bases
Orientation:
Minus strand

Genomic View for ENSG00000227554 Gene

Genes around ENSG00000227554 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227554 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227554 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000227554 Gene

Proteins for ENSG00000227554 Gene

Post-translational modifications for ENSG00000227554 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227554 Gene

Domains & Families for ENSG00000227554 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000227554 Gene

Function for ENSG00000227554 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227554 Gene

Localization for ENSG00000227554 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000227554 Gene

Pathways & Interactions for ENSG00000227554 Gene

SuperPathways for ENSG00000227554 Gene

No Data Available

Interacting Proteins for ENSG00000227554 Gene

Gene Ontology (GO) - Biological Process for ENSG00000227554 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000227554 Gene

Drugs & Compounds for ENSG00000227554 Gene

No Compound Related Data Available

Transcripts for ENSG00000227554 Gene

mRNA/cDNA for ENSG00000227554 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227554 Gene

No ASD Table

Relevant External Links for ENSG00000227554 Gene

GeneLoc Exon Structure for
ENSG00000227554

Expression for ENSG00000227554 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000227554 Gene

genes like me logo Genes that share expression patterns with ENSG00000227554: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227554 Gene

Orthologs for ENSG00000227554 Gene

Evolution for ENSG00000227554 Gene

ENSEMBL:
Gene Tree for ENSG00000227554 (if available)
TreeFam:
Gene Tree for ENSG00000227554 (if available)

No data available for Orthologs for ENSG00000227554 Gene

Paralogs for ENSG00000227554 Gene

No data available for Paralogs for ENSG00000227554 Gene

Variants for ENSG00000227554 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000227554 Gene

Disorders for ENSG00000227554 Gene

No disorders were found for ENSG00000227554 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227554 Gene

Publications for ENSG00000227554 Gene

No publications were found for ENSG00000227554 Gene.

Products for ENSG00000227554 Gene

Sources for ENSG00000227554 Gene

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