Aliases for ENSG00000227163 Gene
Subcategory (RNA class) for ENSG00000227163 Gene
lncRNA
Aliases for ENSG00000227163 Gene
- RP5-1198O20.5 5
External Ids for ENSG00000227163 Gene
- Ensembl: ENSG00000227163
ORGUL Members for ENSG00000227163 Gene
Previous GeneCards Identifiers for ENSG00000227163 Gene
- GC01M044553
Summaries for ENSG00000227163 Gene
GeneCards Summary for ENSG00000227163 Gene
ENSG00000227163 is an Uncategorized gene, and is affiliated with the lncRNA class.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000227163 Gene
Genomics for ENSG00000227163 Gene
Regulatory Elements for ENSG00000227163 Gene
Enhancers for ENSG00000227163 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH01G044089 | 0.8 | ENCODE | 0.7 | -1.4 | -1387 | 0.2 | PKNOX1 INSM2 KLF17 ZNF2 FOSL1 HIC1 GLIS2 ZNF316 ZNF366 ZBTB48 | SLC6A9 DMAP1 ENSG00000227163 KRT8P47 |
| GH01G044047 | 1.5 | Ensembl ENCODE dbSUPER | 0.3 | +39.5 | 39501 | 3.5 | HDGF PKNOX1 ATF1 ARNT SIN3A ARID4B TCF12 CBX5 ELK1 GATA2 | LOC101929609 IPO13 KDM4A SZT2 RPS8 ARTN ENSG00000230615 B4GALT2 KLF17 ENSG00000227163 |
| GH01G044068 | 0.8 | Ensembl ENCODE | 0.4 | +19.8 | 19777 | 1.0 | ZNF766 NR2F1 SMAD4 NR2F6 ZNF652 SPI1 | SLC6A9 ARTN ENSG00000227163 KLF17 |
| GH01G044072 | 0.8 | ENCODE | 0.4 | +16.1 | 16104 | 0.2 | JUN KLF17 FOSL1 TCF12 ZNF121 ZFHX2 EGR1 FOS EGR2 SMARCE1 | ERI3 ENSG00000227163 KLF17 |
| GH01G044077 | 0.7 | ENCODE | 0.4 | +10.4 | 10370 | 1.6 | CTCF PKNOX1 CEBPG CHD7 ZIC2 POLR2A SCRT2 NFE2 MAFK EZH2 | ENSG00000230615 DPH2 C1orf228 ENSG00000227163 KLF17 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around ENSG00000227163 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for ENSG00000227163 Gene
- Chromosome:
- 1
- Start:
- 44,087,958 bp from pter
- End:
- 44,088,477 bp from pter
- Size:
- 520 bases
- Orientation:
- Minus strand
Genomic View for ENSG00000227163 Gene
Genes around ENSG00000227163 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1p34.1 by Ensembl
ENSG00000227163 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
No data available for RefSeq DNA sequence for ENSG00000227163 Gene
Proteins for ENSG00000227163 Gene
Post-translational modifications for ENSG00000227163 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for ENSG00000227163
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ENSG00000227163
- Origene Custom Protein Services for ENSG00000227163
- Search GeneTex for Proteins for ENSG00000227163
Assay Products
No data available for DME Specific Peptides for ENSG00000227163 Gene
Domains & Families for ENSG00000227163 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000227163 Gene
Function for ENSG00000227163 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for ENSG00000227163
CRISPR Products
- Browse CRISPR knockouts for ENSG00000227163
miRNA Products
- Search ViGene Biosciences for ENSG00000227163
Inhibitory RNA Products
- Search ViGene Biosciences for ENSG00000227163
Cell Line Products
- Search ViGene Biosciences for ENSG00000227163
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227163 Gene
Localization for ENSG00000227163 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000227163 Gene
Transcripts for ENSG00000227163 Gene
mRNA/cDNA for ENSG00000227163 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for ENSG00000227163
miRNA Products
- Search ViGene Biosciences for ENSG00000227163
Inhibitory RNA Products
- Search ViGene Biosciences for ENSG00000227163
Flow Cytometry Products
Relevant External Links for ENSG00000227163 Gene
- GeneLoc Exon Structure for
- ENSG00000227163
Expression for ENSG00000227163 Gene
mRNA differential expression in normal tissues according to GTEx for ENSG00000227163 Gene
This gene is overexpressed in Adrenal Gland (x14.4), Bladder (x6.0), Esophagus - Muscularis (x5.8), Lung (x5.1), and Testis (x4.4).
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227163 Gene
Orthologs for ENSG00000227163 Gene
Evolution for ENSG00000227163 Gene
- ENSEMBL:
- Gene Tree for ENSG00000227163 (if available)
- TreeFam:
- Gene Tree for ENSG00000227163 (if available)
No data available for Orthologs for ENSG00000227163 Gene
Paralogs for ENSG00000227163 Gene
No data available for Paralogs for ENSG00000227163 Gene
Variants for ENSG00000227163 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000227163 Gene
Disorders for ENSG00000227163 Gene
No disorders were found for ENSG00000227163 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227163 Gene
Publications for ENSG00000227163 Gene
No publications were found for ENSG00000227163 Gene.
Products for ENSG00000227163 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ENSG00000227163
- Origene Custom Protein Services for ENSG00000227163
- Browse OriGene Inhibitory RNA Products For ENSG00000227163
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for ENSG00000227163
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ENSG00000227163
- GenScript: Custom all cDNA clones Services for ENSG00000227163
- GenScript Custom Purified and Recombinant Proteins Services for ENSG00000227163
- GenScript Custom Assay Services for ENSG00000227163
- GenScript Custom overexpressing Cell Line Services for ENSG00000227163
- Browse GenScript CRISPR for ENSG00000227163
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for ENSG00000227163
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for ENSG00000227163
- VectorBuilder custom plasmid, inducible vectors for ENSG00000227163
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ENSG00000227163
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for ENSG00000227163 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer