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Aliases for ENSG00000227048 Gene

Subcategory (RNA class) for ENSG00000227048 Gene

lncRNA

Aliases for ENSG00000227048 Gene

  • RP11-134G8.2 5

External Ids for ENSG00000227048 Gene

ORGUL Members for ENSG00000227048 Gene

Previous GeneCards Identifiers for ENSG00000227048 Gene

  • GC01P201398

Summaries for ENSG00000227048 Gene

GeneCards Summary for ENSG00000227048 Gene

ENSG00000227048 is an Uncategorized gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for ENSG00000227048 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for ENSG00000227048

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000227048 Gene

Genomics for ENSG00000227048 Gene

Regulatory Elements for ENSG00000227048 Gene

Enhancers for ENSG00000227048 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G201419 1.5 Ensembl ENCODE dbSUPER 0.7 -3.5 -3523 12.8 HDGF FOXA2 ARID4B SIN3A ZNF48 ZBTB7B YY1 ZNF207 FOS ZNF263 ENSG00000224818 ENSG00000223396 ENSG00000227048 LAD1
GH01G201403 1.5 Ensembl ENCODE dbSUPER 0.3 -23.2 -23184 4.0 HDGF HNRNPUL1 FOXA2 MLX ARID4B DMAP1 ZNF2 ZNF48 ZNF143 ZNF263 TNNI1 PKP1 LAD1 ENSG00000227048
GH01G201409 1.1 ENCODE dbSUPER 0.3 -20.6 -20578 0.2 HDGF ATF1 RB1 ARID4B ZBTB7B RAD21 ELK1 ZNF143 EGR2 ZNF263 PKP1 LAD1 ENSG00000227048
GH01G201408 1 ENCODE dbSUPER 0.3 -20.7 -20674 0.0 HDGF CTCF RB1 ARID4B ZMYM3 ZBTB7B RAD21 TEAD3 PATZ1 ZNF143 PKP1 TNNI1 LAD1 ENSG00000227048
GH01G201416 0.6 dbSUPER 0.4 -11.6 -11563 1.6 CTCF ARID4B GATAD2B FOXA1 GLIS2 SSRP1 KLF16 PATZ1 ZNF391 THAP11 ENSG00000224818 PHLDA3 ENSG00000227048 LAD1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000227048 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000227048 Gene

Chromosome:
1
Start:
201,428,975 bp from pter
End:
201,429,361 bp from pter
Size:
387 bases
Orientation:
Plus strand

Genomic View for ENSG00000227048 Gene

Genes around ENSG00000227048 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227048 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227048 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for ENSG00000227048 Gene

ORGUL Member Location for ENSG00000227048 gene

No data available for RefSeq DNA sequence for ENSG00000227048 Gene

Proteins for ENSG00000227048 Gene

Post-translational modifications for ENSG00000227048 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227048 Gene

Domains & Families for ENSG00000227048 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000227048 Gene

Function for ENSG00000227048 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227048 Gene

Localization for ENSG00000227048 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000227048 Gene

Pathways & Interactions for ENSG00000227048 Gene

SuperPathways for ENSG00000227048 Gene

No Data Available

Interacting Proteins for ENSG00000227048 Gene

Gene Ontology (GO) - Biological Process for ENSG00000227048 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000227048 Gene

Drugs & Compounds for ENSG00000227048 Gene

No Compound Related Data Available

Transcripts for ENSG00000227048 Gene

fRNAdb Secondary structures for ENSG00000227048 Gene

  • FR392128

mRNA/cDNA for ENSG00000227048 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227048 Gene

No ASD Table

Relevant External Links for ENSG00000227048 Gene

GeneLoc Exon Structure for
ENSG00000227048

Expression for ENSG00000227048 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000227048 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000227048 Gene

This gene is overexpressed in Muscle - Skeletal (x51.2).
genes like me logo Genes that share expression patterns with ENSG00000227048: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227048 Gene

Orthologs for ENSG00000227048 Gene

Evolution for ENSG00000227048 Gene

ENSEMBL:
Gene Tree for ENSG00000227048 (if available)
TreeFam:
Gene Tree for ENSG00000227048 (if available)

No data available for Orthologs for ENSG00000227048 Gene

Paralogs for ENSG00000227048 Gene

No data available for Paralogs for ENSG00000227048 Gene

Variants for ENSG00000227048 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000227048 Gene

Disorders for ENSG00000227048 Gene

No disorders were found for ENSG00000227048 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227048 Gene

Publications for ENSG00000227048 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  2. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S. … Stadler P.F. (Nat. Biotechnol. 2005) 1

Products for ENSG00000227048 Gene

Sources for ENSG00000227048 Gene

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