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Aliases for ENSG00000226816 Gene

Subcategory (RNA class) for ENSG00000226816 Gene

lncRNA

Quality Score for this RNA gene is

1.2

Aliases for ENSG00000226816 Gene

  • AC005082.1 5

External Ids for ENSG00000226816 Gene

ORGUL Members for ENSG00000226816 Gene

Previous GeneCards Identifiers for ENSG00000226816 Gene

  • GC07P023245

Summaries for ENSG00000226816 Gene

GeneCards Summary for ENSG00000226816 Gene

ENSG00000226816 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for ENSG00000226816 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for ENSG00000226816

Additional gene information for ENSG00000226816 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000226816 Gene

Genomics for ENSG00000226816 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000226816 Gene

Promoters and enhancers for ENSG00000226816 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I023205 Promoter/Enhancer 1.2 Ensembl ENCODE 564.9 +0.8 813 1.9 ELF3 SOX13 FOXA2 SAP130 CEBPG ZNF48 POLR2A RCOR1 NR2F6 CHD2 ENSG00000226816 KLHL7-AS1 GPNMB NUPL2 LOC101927890
GH07I023181 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 14.5 -23.1 -23138 3.3 CLOCK MLX FEZF1 DMAP1 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC NUPL2 KLHL7-AS1 EEF1A1P6 ENSG00000226816 SNHG26 ENSG00000226329 TRA2A
GH07I023246 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 7.2 +41.7 41656 2.6 USF1 ZMYM3 ZNF507 ZNF316 POLR2A SCRT2 RCOR1 FOSL2 FOS IKZF2 GPNMB KLHL7-AS1 IGF2BP3 LOC389473 KLHL7 ENSG00000226816 MALSU1
GH07I022585 Enhancer 1.1 Ensembl ENCODE dbSUPER 10.4 -617.6 -617648 6 CTCF FOXA2 JUN TEAD4 ZNF48 RAD21 TEAD3 GATA3 POLR2A ZNF143 ENSG00000232949 LOC541472 IL6 ENSG00000226816 LOC100506178 STEAP1B ENSG00000225541 GC07P022403
GH07I023210 Enhancer 0.2 Ensembl 11.7 +5.1 5114 0.2 ENSG00000226816 NUPL2 LOC101927890
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000226816 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000226816 Gene

Genomic Locations for ENSG00000226816 Gene
chr7:23,205,787-23,208,045
(GRCh38/hg38)
Size:
2,259 bases
Orientation:
Plus strand
chr7:23,245,632-23,247,664
(GRCh37/hg19)

Genomic View for ENSG00000226816 Gene

Genes around ENSG00000226816 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000226816 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000226816 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for ENSG00000226816 Gene

ORGUL Member Location for ENSG00000226816 gene

No data available for RefSeq DNA sequence for ENSG00000226816 Gene

Proteins for ENSG00000226816 Gene

Post-translational modifications for ENSG00000226816 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000226816 Gene

Domains & Families for ENSG00000226816 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000226816 Gene

Function for ENSG00000226816 Gene

Phenotypes From GWAS Catalog for ENSG00000226816 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000226816 Gene

Localization for ENSG00000226816 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000226816 Gene

Pathways & Interactions for ENSG00000226816 Gene

SuperPathways for ENSG00000226816 Gene

No Data Available

Interacting Proteins for ENSG00000226816 Gene

Gene Ontology (GO) - Biological Process for ENSG00000226816 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000226816 Gene

Drugs & Compounds for ENSG00000226816 Gene

No Compound Related Data Available

Transcripts for ENSG00000226816 Gene

fRNAdb Secondary structures for ENSG00000226816 Gene

  • FR335689

mRNA/cDNA for ENSG00000226816 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000226816 Gene

No ASD Table

Relevant External Links for ENSG00000226816 Gene

GeneLoc Exon Structure for
ENSG00000226816

Expression for ENSG00000226816 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000226816 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000226816 Gene

This gene is overexpressed in Testis (x7.8) and Kidney - Cortex (x5.0).
genes like me logo Genes that share expression patterns with ENSG00000226816: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000226816 Gene

Orthologs for ENSG00000226816 Gene

Evolution for ENSG00000226816 Gene

ENSEMBL:
Gene Tree for ENSG00000226816 (if available)
TreeFam:
Gene Tree for ENSG00000226816 (if available)

No data available for Orthologs for ENSG00000226816 Gene

Paralogs for ENSG00000226816 Gene

No data available for Paralogs for ENSG00000226816 Gene

Variants for ENSG00000226816 Gene

Variation tolerance for ENSG00000226816 Gene

Gene Damage Index Score: 0.54; 11.74% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Additional Variant Information for ENSG00000226816 Gene

Disorders for ENSG00000226816 Gene

No disorders were found for ENSG00000226816 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000226816 Gene

Publications for ENSG00000226816 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  2. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for ENSG00000226816 Gene

Sources for ENSG00000226816 Gene

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