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ENSG00000226380 Gene(RNA Gene)

 

GCID:
GC07M130880
GIFtS:
7
Genes Participants
UDN Logo

Aliases for ENSG00000226380 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000226380 Gene

  • AC058791.1 5

External Ids for ENSG00000226380 Gene

Previous GeneCards Identifiers for ENSG00000226380 Gene

  • GC07M130565
  • GC07M130878

Summaries for ENSG00000226380 Gene

GeneCards Summary for ENSG00000226380 Gene

ENSG00000226380 is an RNA Gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000226380 Gene

Genomics for ENSG00000226380 Gene

Products:

  1. Regulatory Element

Regulatory Elements for ENSG00000226380 Gene

Enhancers for ENSG00000226380 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G130883 2.1 FANTOM5 Ensembl ENCODE dbSUPER 16.3 +17.4 17402 24.6 MLX CREB3L1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 SP3 ENSG00000226380 RNU6-1010P LINC-PINT KLHDC10 MKLN1 GC07P130900 MIR29B1 GC07M130879 GC07M130881
GH07G130881 1 ENCODE dbSUPER 17.3 +31.1 31138 2.1 ZNF146 CEBPG YY1 IRF9 ZNF316 GATA2 POLR2A CBX5 FOS CEBPB ENSG00000226380 RNU6-1010P LINC-PINT GC07M130879 GC07M130881 MIR29B1 GC07P130900
GH07G130873 1.1 ENCODE dbSUPER 12.3 +36.8 36794 5.4 HDAC1 CBX3 RB1 ARNT SIN3A RAD21 YY1 ZNF766 CBX5 SCRT2 ENSG00000226380 MIR29A GC07P130871
GH07G130837 1 Ensembl ENCODE 10.2 +74.1 74089 2.8 HDGF JUN ZNF316 NFE2 FOS TCF7L2 RFX1 BHLHE40 MAFG MNT ENSG00000226380 LOC100133252 LOC105375509
GH07G130880 0.6 dbSUPER 14.2 +32.5 32512 0.4 HLF CEBPB NR3C1 CEBPG IRF9 POLR2A CEBPA ZZZ3 ENSG00000226380 GC07M130879 GC07M130881 MIR29B1 GC07P130900
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000226380 on UCSC Golden Path with GeneCards custom track

Promoters for ENSG00000226380 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000218050 1210 3401 HDGF PKNOX1 MLX ARNT WRNIP1 ARID4B SIN3A FEZF1 DMAP1 SLC30A9

Genomic Location for ENSG00000226380 Gene

Chromosome:
7
Start:
130,876,809 bp from pter
End:
130,913,310 bp from pter
Size:
36,502 bases
Orientation:
Minus strand

Genomic View for ENSG00000226380 Gene

Genes around ENSG00000226380 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000226380 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000226380 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000226380 Gene

Proteins for ENSG00000226380 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000226380 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000226380 Gene

Domains & Families for ENSG00000226380 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000226380 Gene

Function for ENSG00000226380 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000226380 Gene

Localization for ENSG00000226380 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000226380 Gene

Pathways & Interactions for ENSG00000226380 Gene

SuperPathways for ENSG00000226380 Gene

PathCards logo More details on SuperPathways for ENSG00000226380
No Data Available

Interacting Proteins for ENSG00000226380 Gene

Gene Ontology (GO) - Biological Process for ENSG00000226380 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000226380 Gene

Drugs & Compounds for ENSG00000226380 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000226380 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for ENSG00000226380 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000226380 Gene

No ASD Table

Relevant External Links for ENSG00000226380 Gene

GeneLoc Exon Structure for
ENSG00000226380

Expression for ENSG00000226380 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000226380 Gene

Orthologs for ENSG00000226380 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000226380 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
 Mammalia bta-mir-29a 35
  • 100 (a)
 OneToOne
dog
(Canis familiaris)
 Mammalia cfa-mir-29a 35
  • 100 (a)
 OneToOne
chimpanzee
(Pan troglodytes)
 Mammalia ptr-mir-29a 35
  • 100 (a)
 OneToOne
oppossum
(Monodelphis domestica)
 Mammalia mdo-mir-29a-1 35
  • 97 (a)
 OneToOne
mouse
(Mus musculus)
 Mammalia Mir29a 35
  • 86 (a)
 OneToOne
platypus
(Ornithorhynchus anatinus)
 Mammalia oan-mir-29a-1 35
  • 59 (a)
 OneToOne
chicken
(Gallus gallus)
 Aves gga-mir-29a 35
  • 82 (a)
 OneToOne
lizard
(Anolis carolinensis)
 Reptilia aca-mir-29a-1 35
  • 56 (a)
 OneToMany
zebrafish
(Danio rerio)
 Actinopterygii CR749762.2 35
  • 62 (a)
 OneToOne
Species where no ortholog for ENSG00000226380 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ENSG00000226380 Gene

ENSEMBL:
Gene Tree for ENSG00000226380 (if available)
TreeFam:
Gene Tree for ENSG00000226380 (if available)

Paralogs for ENSG00000226380 Gene

No data available for Paralogs for ENSG00000226380 Gene

Variants for ENSG00000226380 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000226380 Gene

Disorders for ENSG00000226380 Gene

No disorders were found for ENSG00000226380 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000226380 Gene

Publications for ENSG00000226380 Gene

No publications were found for ENSG00000226380 Gene.

Products for ENSG00000226380 Gene

Sources for ENSG00000226380 Gene

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