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Aliases for ENSG00000225886 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000225886 Gene

  • RP11-288L9.4 5

External Ids for ENSG00000225886 Gene

Previous GeneCards Identifiers for ENSG00000225886 Gene

  • GC01P027995

Summaries for ENSG00000225886 Gene

GeneCards Summary for ENSG00000225886 Gene

ENSG00000225886 is an RNA Gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000225886 Gene

Genomics for ENSG00000225886 Gene

Regulatory Elements for ENSG00000225886 Gene

Enhancers for ENSG00000225886 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G027614 2.1 FANTOM5 Ensembl ENCODE dbSUPER 12.2 -43.6 -43631 23.4 MLX ZFP64 DMAP1 YBX1 FEZF1 YY1 ZNF143 ZNF263 SP3 MCM3 FGR ACTG1P20 THEMIS2 ENSG00000225886 XKR8 FAM76A RNU6-48P TMEM222 TRNAU1AP RPA2
GH01G027415 1.4 Ensembl ENCODE dbSUPER 11.3 -251.4 -251381 4.5 HDGF PKNOX1 RB1 WRNIP1 SIN3A RAD21 RFX5 YY1 ZNF121 CBX5 CD164L2 LOC105376892 WASF2 ENSG00000225886 ENSG00000243659 PIR40118 ENSG00000241169
GH01G027712 0.7 ENCODE 12 +44.0 43993 1.4 STAT1 NFIA TEAD4 USF2 MNT ZNF398 RAD51 NFIC ZNF692 GATA2 STX12 ENSG00000225886 RNU6-1245P PPP1R8 SCARNA1 ACTG1P20 RNU6-48P TMEM222 FAM76A GC01P027694
GH01G027713 0.4 ENCODE 12 +43.1 43137 0.2 GATA2 NFE2 ENSG00000225886 SCARNA1 ACTG1P20 RNU6-48P TMEM222 STX12 FAM76A GC01P027694
GH01G027412 0.4 dbSUPER 11 -255.6 -255575 3.5 CEBPG CD164L2 GPR3 ENSG00000231207 WASF2 LOC105376892 ENSG00000225886 RNU6-48P TMEM222 ACTG1P20 ENSG00000243659
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000225886 on UCSC Golden Path with GeneCards custom track

Promoters for ENSG00000225886 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000250897 -168 201 HDGF ATF1 CREB3L1 ARNT ARID4B SIN3A YBX1 ZNF2 TCF12 ZNF143

Genomic Location for ENSG00000225886 Gene

Chromosome:
1
Start:
27,669,468 bp from pter
End:
27,703,063 bp from pter
Size:
33,596 bases
Orientation:
Plus strand

Genomic View for ENSG00000225886 Gene

Genes around ENSG00000225886 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000225886 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225886 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000225886 Gene

Proteins for ENSG00000225886 Gene

Post-translational modifications for ENSG00000225886 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225886 Gene

Domains & Families for ENSG00000225886 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000225886 Gene

Function for ENSG00000225886 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225886 Gene

Localization for ENSG00000225886 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000225886 Gene

Pathways & Interactions for ENSG00000225886 Gene

SuperPathways for ENSG00000225886 Gene

No Data Available

Interacting Proteins for ENSG00000225886 Gene

Gene Ontology (GO) - Biological Process for ENSG00000225886 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000225886 Gene

Drugs & Compounds for ENSG00000225886 Gene

No Compound Related Data Available

Transcripts for ENSG00000225886 Gene

mRNA/cDNA for ENSG00000225886 Gene

(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225886 Gene

No ASD Table

Relevant External Links for ENSG00000225886 Gene

GeneLoc Exon Structure for
ENSG00000225886

Expression for ENSG00000225886 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000225886 Gene

genes like me logo Genes that share expression patterns with ENSG00000225886: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225886 Gene

Orthologs for ENSG00000225886 Gene

Evolution for ENSG00000225886 Gene

ENSEMBL:
Gene Tree for ENSG00000225886 (if available)
TreeFam:
Gene Tree for ENSG00000225886 (if available)

No data available for Orthologs for ENSG00000225886 Gene

Paralogs for ENSG00000225886 Gene

No data available for Paralogs for ENSG00000225886 Gene

Variants for ENSG00000225886 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000225886 Gene

Disorders for ENSG00000225886 Gene

No disorders were found for ENSG00000225886 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000225886 Gene

Publications for ENSG00000225886 Gene

No publications were found for ENSG00000225886 Gene.

Products for ENSG00000225886 Gene

Sources for ENSG00000225886 Gene

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