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ENSG00000223947 Gene(RNA Gene)

 

GCID:
GC02M100993
GIFtS:
11
Genes Participants
UDN Logo

Aliases for ENSG00000223947 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000223947 Gene

  • AC016738.4 5

External Ids for ENSG00000223947 Gene

Previous GeneCards Identifiers for ENSG00000223947 Gene

  • GC02M101610

Summaries for ENSG00000223947 Gene

GeneCards Summary for ENSG00000223947 Gene

ENSG00000223947 is an RNA Gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000223947 Gene

Genomics for ENSG00000223947 Gene

Products:

  1. Regulatory Element

Regulatory Elements for ENSG00000223947 Gene

Enhancers for ENSG00000223947 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G101080 1.3 ENCODE dbSUPER 10.1 -79.2 -79188 1.7 CREB3L1 ARID4B SIN3A DMAP1 YY1 ZNF766 KLF13 SP3 MXD4 ZNF592 LOC101927142 ENSG00000223947 RPL31 NPAS2 TBC1D8-AS1 TBC1D8 GC02P101087 GC02P101072
GH02G101001 1.2 ENCODE 8.7 -1.2 -1151 3.9 MLX CREB3L1 AGO1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 LOC101927142 NPAS2 ENSG00000223947 GC02P101011
GH02G101047 0.9 ENCODE dbSUPER 10.9 -45.4 -45386 1.2 RFX1 ZFP64 ZNF426 ZNF623 ZNF518A ZNF697 ZNF555 JUND ZNF34 SMARCA4 RPL31 ENSG00000223947 NPAS2 ENSG00000232034 LOC101927142 SNORD89 LOC105373510 BBIP1P1
GH02G100603 0.7 FANTOM5 ENCODE 11.2 +398.6 398565 0.1 NRF1 ZBTB40 PDCL3 RPL31 ENSG00000223947 LINC01849 GC02P100600
GH02G101131 1 dbSUPER 6.8 -132.3 -132333 5.3 FOXA2 PKNOX1 MLX ZFP64 ARID4B DMAP1 YY1 SLC30A9 CBX5 ZNF143 TBC1D8-AS1 ENSG00000223947 TBC1D8 IL1R2 SNORD89 GC02P101093
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000223947 on UCSC Golden Path with GeneCards custom track

Promoters for ENSG00000223947 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000120755 -556 1601 MLX CREB3L1 AGO1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3

Genomic Location for ENSG00000223947 Gene

Chromosome:
2
Start:
100,993,676 bp from pter
End:
101,002,244 bp from pter
Size:
8,569 bases
Orientation:
Minus strand

Genomic View for ENSG00000223947 Gene

Genes around ENSG00000223947 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000223947 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000223947 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000223947 Gene

Proteins for ENSG00000223947 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000223947 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000223947 Gene

Domains & Families for ENSG00000223947 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000223947 Gene

Function for ENSG00000223947 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000223947 Gene

Localization for ENSG00000223947 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000223947 Gene

Pathways & Interactions for ENSG00000223947 Gene

SuperPathways for ENSG00000223947 Gene

PathCards logo More details on SuperPathways for ENSG00000223947
No Data Available

Interacting Proteins for ENSG00000223947 Gene

Gene Ontology (GO) - Biological Process for ENSG00000223947 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000223947 Gene

Drugs & Compounds for ENSG00000223947 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000223947 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for ENSG00000223947 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000223947 Gene

No ASD Table

Relevant External Links for ENSG00000223947 Gene

GeneLoc Exon Structure for
ENSG00000223947

Expression for ENSG00000223947 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000223947 Gene

mRNA expression in normal human tissues for ENSG00000223947 Gene
mRNA expression by GTEx for ENSG00000223947 Gene
genes like me logo Genes that share expression patterns with ENSG00000223947: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000223947 Gene

Orthologs for ENSG00000223947 Gene

Evolution for ENSG00000223947 Gene

ENSEMBL:
Gene Tree for ENSG00000223947 (if available)
TreeFam:
Gene Tree for ENSG00000223947 (if available)

No data available for Orthologs for ENSG00000223947 Gene

Paralogs for ENSG00000223947 Gene

No data available for Paralogs for ENSG00000223947 Gene

Variants for ENSG00000223947 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000223947 Gene

Disorders for ENSG00000223947 Gene

No disorders were found for ENSG00000223947 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000223947 Gene

Publications for ENSG00000223947 Gene

No publications were found for ENSG00000223947 Gene.

Products for ENSG00000223947 Gene

Sources for ENSG00000223947 Gene

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