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Aliases for ENSG00000223396 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000223396 Gene

  • RP11-134G8.5 5

External Ids for ENSG00000223396 Gene

Summaries for ENSG00000223396 Gene

GeneCards Summary for ENSG00000223396 Gene

ENSG00000223396 is an RNA Gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000223396 Gene

Genomics for ENSG00000223396 Gene

Regulatory Elements for ENSG00000223396 Gene

Enhancers for ENSG00000223396 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G201498 1.8 FANTOM5 ENCODE dbSUPER 18.5 -15.6 -15563 10.2 CREB3L1 ZFP64 DMAP1 YY1 ZNF143 SP3 SSRP1 ZNF610 RCOR2 GLIS1 IPO9-AS1 IPO9 ENSG00000223396 ENSG00000235121 NAV1 ELF3-AS1 RNPEP ENSG00000273478 LMOD1 CSRP1
GH01G201511 1.6 Ensembl ENCODE dbSUPER 17.9 -6.3 -6264 2.5 HDGF PKNOX1 ARNT ZFP64 ARID4B SIN3A YBX1 FEZF1 ZNF2 ZBTB7B ENSG00000223396 PHLDA3 ENSG00000224818 ENSG00000236390 NAV1 CSRP1
GH01G201508 0.7 ENCODE dbSUPER 18.2 -9.6 -9595 1.3 NR2F1 CEBPG FOS ENSG00000223396 ENSG00000224536 CSRP1
GH01G201488 1.9 FANTOM5 Ensembl ENCODE dbSUPER 5.8 -25.6 -25594 9.1 HDGF FOXA2 PKNOX1 ARID4B SIN3A FEZF1 ZBTB7B YY1 ZNF207 ZNF143 ENSG00000224818 NAV1 PHLDA3 LAD1 ENSG00000223396 LMOD1 CSRP1 GC01M201488 GC01P201494
GH01G201530 1.8 FANTOM5 Ensembl ENCODE dbSUPER 5 +12.8 12765 2.8 PKNOX1 FOXA2 ATF1 ZNF493 ZFP64 SIN3A ZNF2 YY1 ZNF121 GLIS2 IPO9-AS1 NAV1 IPO9 ENSG00000235121 ENSG00000224536 CSRP1 PHLDA3 ENSG00000224818 ELF3-AS1 RNU6-501P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000223396 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000223396 Gene

Chromosome:
1
Start:
201,518,703 bp from pter
End:
201,530,474 bp from pter
Size:
11,772 bases
Orientation:
Plus strand

Genomic View for ENSG00000223396 Gene

Genes around ENSG00000223396 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000223396 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000223396 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000223396 Gene

Proteins for ENSG00000223396 Gene

Post-translational modifications for ENSG00000223396 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000223396 Gene

Domains & Families for ENSG00000223396 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000223396 Gene

Function for ENSG00000223396 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000223396 Gene

Localization for ENSG00000223396 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000223396 Gene

Pathways & Interactions for ENSG00000223396 Gene

SuperPathways for ENSG00000223396 Gene

No Data Available

Interacting Proteins for ENSG00000223396 Gene

Gene Ontology (GO) - Biological Process for ENSG00000223396 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000223396 Gene

Drugs & Compounds for ENSG00000223396 Gene

No Compound Related Data Available

Transcripts for ENSG00000223396 Gene

mRNA/cDNA for ENSG00000223396 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000223396 Gene

No ASD Table

Relevant External Links for ENSG00000223396 Gene

GeneLoc Exon Structure for
ENSG00000223396

Expression for ENSG00000223396 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000223396 Gene

Orthologs for ENSG00000223396 Gene

Evolution for ENSG00000223396 Gene

ENSEMBL:
Gene Tree for ENSG00000223396 (if available)
TreeFam:
Gene Tree for ENSG00000223396 (if available)

No data available for Orthologs for ENSG00000223396 Gene

Paralogs for ENSG00000223396 Gene

No data available for Paralogs for ENSG00000223396 Gene

Variants for ENSG00000223396 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000223396 Gene

Disorders for ENSG00000223396 Gene

No disorders were found for ENSG00000223396 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000223396 Gene

Publications for ENSG00000223396 Gene

No publications were found for ENSG00000223396 Gene.

Products for ENSG00000223396 Gene

Sources for ENSG00000223396 Gene

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