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Aliases for ENSG00000223027 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000223027 Gene

  • Small Nucleolar RNA SNORA57 5
  • SNORA57 5

External Ids for ENSG00000223027 Gene

Previous GeneCards Identifiers for ENSG00000223027 Gene

  • GC10P027119
  • GC10P027078

Summaries for ENSG00000223027 Gene

GeneCards Summary for ENSG00000223027 Gene

ENSG00000223027 is an RNA Gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000223027 Gene

Genomics for ENSG00000223027 Gene

Regulatory Elements for ENSG00000223027 Gene

Enhancers for ENSG00000223027 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G026736 1.7 FANTOM5 Ensembl ENCODE dbSUPER 12 -50.1 -50123 4.2 HDGF TBP PKNOX1 FOXA2 WRNIP1 SIN3A CBX5 RELB ETV6 IKZF2 ABI1 PDSS1 ENSG00000223027 RNU6-946P MASTL APBB1IP GC10P026755 ENSG00000235843
GH10G026856 1.7 FANTOM5 ENCODE dbSUPER 11.7 +70.4 70416 5.4 HDGF CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 ZNF207 ZNF143 ABI1 RNU6-946P ENSG00000223027 MASTL PDSS1 ACBD5 APBB1IP YME1L1 GC10P026852
GH10G026733 1.2 ENCODE dbSUPER 11 -54.6 -54571 2.7 FOXA2 MLX ARID4B DMAP1 ZNF48 YY1 TCF12 ZHX2 MXD4 MIER2 ABI1 ENSG00000223027 RNU6-946P ENSG00000235843 GC10P026755
GH10G026840 0.8 Ensembl dbSUPER 11.9 +51.3 51284 0.2 SCRT1 GLIS1 ZSCAN5C SCRT2 ZNF10 ABI1 RNU6-946P ENSG00000223027 GC10P026852 GC10M026780
GH10G026821 0.6 dbSUPER 12.4 +34.5 34495 3.7 ZNF146 NFIB HLF ZNF843 ZNF121 NFIC PRDM6 RAD51 BCL6B WT1 ABI1 ENSG00000223027 RNU6-946P GC10M026780 GC10P026852
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000223027 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000223027 Gene

Chromosome:
10
Start:
26,789,017 bp from pter
End:
26,789,157 bp from pter
Size:
141 bases
Orientation:
Plus strand

Genomic View for ENSG00000223027 Gene

Genes around ENSG00000223027 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000223027 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000223027 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000223027 Gene

Proteins for ENSG00000223027 Gene

Post-translational modifications for ENSG00000223027 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000223027 Gene

Domains & Families for ENSG00000223027 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000223027 Gene

Function for ENSG00000223027 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000223027 Gene

Localization for ENSG00000223027 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000223027 Gene

Pathways & Interactions for ENSG00000223027 Gene

SuperPathways for ENSG00000223027 Gene

No Data Available

Interacting Proteins for ENSG00000223027 Gene

Gene Ontology (GO) - Biological Process for ENSG00000223027 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000223027 Gene

Drugs & Compounds for ENSG00000223027 Gene

No Compound Related Data Available

Transcripts for ENSG00000223027 Gene

mRNA/cDNA for ENSG00000223027 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000223027 Gene

No ASD Table

Relevant External Links for ENSG00000223027 Gene

GeneLoc Exon Structure for
ENSG00000223027

Expression for ENSG00000223027 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000223027 Gene

genes like me logo Genes that share expression patterns with ENSG00000223027: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000223027 Gene

Orthologs for ENSG00000223027 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000223027 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA57 35
  • 99 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA57 35 35
  • 69 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia SNORA57 35
  • 67 (a)
OneToMany
dog
(Canis familiaris)
Mammalia SNORA57 35
  • 63 (a)
OneToMany
cow
(Bos Taurus)
Mammalia SNORA57 35
  • 58 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORA57 35
  • 65 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA57 35 35 35
  • 63 (a)
ManyToMany
Species where no ortholog for ENSG00000223027 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ENSG00000223027 Gene

ENSEMBL:
Gene Tree for ENSG00000223027 (if available)
TreeFam:
Gene Tree for ENSG00000223027 (if available)

Paralogs for ENSG00000223027 Gene

No data available for Paralogs for ENSG00000223027 Gene

Variants for ENSG00000223027 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000223027 Gene

Disorders for ENSG00000223027 Gene

No disorders were found for ENSG00000223027 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000223027 Gene

Publications for ENSG00000223027 Gene

No publications were found for ENSG00000223027 Gene.

Products for ENSG00000223027 Gene

Sources for ENSG00000223027 Gene

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