Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ENSG00000221611 Gene

Subcategory (RNA class) for ENSG00000221611 Gene

snoRNA

Quality Score for this RNA gene is

1

Aliases for ENSG00000221611 Gene

  • Small Nucleolar RNA SNORD88 5
  • SNORD88 5

External Ids for ENSG00000221611 Gene

ORGUL Members for ENSG00000221611 Gene

Previous GeneCards Identifiers for ENSG00000221611 Gene

  • GC12P013016
  • GC12P013124

Summaries for ENSG00000221611 Gene

GeneCards Summary for ENSG00000221611 Gene

ENSG00000221611 is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for ENSG00000221611 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000221611 Gene

Genomics for ENSG00000221611 Gene

Regulatory Elements for ENSG00000221611 Gene

Enhancers for ENSG00000221611 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12H013193 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.5 +231.0 231040 19 TBP PKNOX1 NFIB KLF17 SIN3A FEZF1 BATF RAD21 RFX5 YY1 HTR7P1 MIR614 GSG1 DDX47 GPRC5D-AS1 ENSG00000255621 HEBP1 ENSG00000221611 LOH12CR2 ENSG00000256011
GH12H013005 0.5 ENCODE 10.6 +33.8 33809 0 HNF4G MAX HNF4A RAD21 NR2F2 ENSG00000221611 EMP1 GPRC5D MIR614 GSG1 GC12P013002 RPS26P46
GH12H013214 0.5 dbSUPER 10.5 +245.0 245043 4 ZNF707 POLR2A ZNF507 DDX47 LRP6 EMP1 MIR614 ENSG00000256011 ENSG00000221611 GPRC5D-AS1 GPRC5D GSG1 GC12P013222
GH12H013008 0.2 ENCODE 10.6 +37.0 37030 1 ENSG00000221611 EMP1 GSG1 GPRC5D GPRC5D-AS1 MIR614 ENSG00000255621 GC12P013002 RPS26P46
GH12H012975 1.2 Ensembl ENCODE dbSUPER 0.7 +4.3 4346 2 ELF3 CTCF JUN RAD21 ZNF121 SMC3 FOS MAFK NFE2L2 CEBPB ENSG00000255621 HEBP1 MIR614 HTR7P1 DDX47 EMP1 GPRC5D ENSG00000221611
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000221611 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000221611 Gene

Chromosome:
12
Start:
12,972,053 bp from pter
End:
12,972,143 bp from pter
Size:
91 bases
Orientation:
Plus strand

Genomic View for ENSG00000221611 Gene

Genes around ENSG00000221611 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000221611 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000221611 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000221611 Gene

Proteins for ENSG00000221611 Gene

Post-translational modifications for ENSG00000221611 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000221611 Gene

Domains & Families for ENSG00000221611 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000221611 Gene

Function for ENSG00000221611 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000221611 Gene

Localization for ENSG00000221611 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000221611 Gene

Pathways & Interactions for ENSG00000221611 Gene

SuperPathways for ENSG00000221611 Gene

No Data Available

Interacting Proteins for ENSG00000221611 Gene

Gene Ontology (GO) - Biological Process for ENSG00000221611 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000221611 Gene

Drugs & Compounds for ENSG00000221611 Gene

No Compound Related Data Available

Transcripts for ENSG00000221611 Gene

mRNA/cDNA for ENSG00000221611 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000221611 Gene

No ASD Table

Relevant External Links for ENSG00000221611 Gene

GeneLoc Exon Structure for
ENSG00000221611

Expression for ENSG00000221611 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000221611 Gene

genes like me logo Genes that share expression patterns with ENSG00000221611: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000221611 Gene

Orthologs for ENSG00000221611 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000221611 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD88 34
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD88 34
  • 67 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD88 34
  • 67 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia SNORD88 34
  • 62 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia SNORD88 34
  • 61 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm23991 34
  • 60 (a)
ManyToMany
chicken
(Gallus gallus)
Aves SNORD88 34
  • 48 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORD88 34
  • 58 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORD88 34
  • 50 (a)
OneToMany
Species where no ortholog for ENSG00000221611 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ENSG00000221611 Gene

ENSEMBL:
Gene Tree for ENSG00000221611 (if available)
TreeFam:
Gene Tree for ENSG00000221611 (if available)

Paralogs for ENSG00000221611 Gene

No data available for Paralogs for ENSG00000221611 Gene

Variants for ENSG00000221611 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000221611 Gene

Disorders for ENSG00000221611 Gene

No disorders were found for ENSG00000221611 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000221611 Gene

Publications for ENSG00000221611 Gene

No publications were found for ENSG00000221611 Gene.

Products for ENSG00000221611 Gene

Sources for ENSG00000221611 Gene

Content
Loading form....