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Aliases for ENSG00000221139 Gene

Subcategory (RNA class) for ENSG00000221139 Gene

snoRNA

Quality Score for this RNA gene is

1

Aliases for ENSG00000221139 Gene

  • Small Nucleolar RNA SNORD23 5
  • SNORD23 5

External Ids for ENSG00000221139 Gene

ORGUL Members for ENSG00000221139 Gene

Previous GeneCards Identifiers for ENSG00000221139 Gene

  • GC18M017284
  • GC18M019030

Summaries for ENSG00000221139 Gene

GeneCards Summary for ENSG00000221139 Gene

ENSG00000221139 is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000221139 Gene

Genomics for ENSG00000221139 Gene

Regulatory Elements for ENSG00000221139 Gene

Enhancers for ENSG00000221139 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18G021484 0.8 ENCODE 10.9 -35.3 -35279 3.4 PKNOX1 FEZF1 ZEB1 GATA2 SCRT2 FOS ZNF362 ZNF843 MAFF PRDM6 ENSG00000221139 ABHD3 ROCK1 LOC101927521 GC18P021594
GH18G021390 0.8 ENCODE 10.5 +59.3 59341 1.4 NFIB INSM2 SIN3A GATA2 ZNF350 FOS IKZF2 SP3 TBX21 ZNF217 ENSG00000221139 ABHD3 GC18M021451 ENSG00000265948
GH18G021386 0.6 ENCODE 10.5 +63.6 63589 0.9 FOXA2 BCL11A POLR2A POU5F1 CBX2 CHD7 ENSG00000221139 GC18M021451 ENSG00000265948
GH18G021404 0.5 ENCODE 10.8 +46.1 46102 0.2 ZNF217 MBD2 GATA3 TCF7L2 ENSG00000221139 GC18M021451 ENSG00000265948
GH18G021389 0.4 ENCODE 10.5 +60.9 60949 0.6 CTCF ENSG00000221139 ABHD3 GC18M021451 ENSG00000265948
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000221139 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000221139 Gene

Chromosome:
18
Start:
21,450,653 bp from pter
End:
21,450,756 bp from pter
Size:
104 bases
Orientation:
Minus strand

Genomic View for ENSG00000221139 Gene

Genes around ENSG00000221139 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000221139 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000221139 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000221139 Gene

Proteins for ENSG00000221139 Gene

Post-translational modifications for ENSG00000221139 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000221139 Gene

Domains & Families for ENSG00000221139 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000221139 Gene

Function for ENSG00000221139 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000221139 Gene

Localization for ENSG00000221139 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000221139 Gene

Pathways & Interactions for ENSG00000221139 Gene

SuperPathways for ENSG00000221139 Gene

No Data Available

Interacting Proteins for ENSG00000221139 Gene

Gene Ontology (GO) - Biological Process for ENSG00000221139 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000221139 Gene

Drugs & Compounds for ENSG00000221139 Gene

No Compound Related Data Available

Transcripts for ENSG00000221139 Gene

mRNA/cDNA for ENSG00000221139 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000221139 Gene

No ASD Table

Relevant External Links for ENSG00000221139 Gene

GeneLoc Exon Structure for
ENSG00000221139

Expression for ENSG00000221139 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000221139 Gene

genes like me logo Genes that share expression patterns with ENSG00000221139: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000221139 Gene

Orthologs for ENSG00000221139 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ENSG00000221139 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD23 35
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD23 35
  • 55 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm23839 35
  • 50 (a)
ManyToMany
Species where no ortholog for ENSG00000221139 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000221139 Gene

ENSEMBL:
Gene Tree for ENSG00000221139 (if available)
TreeFam:
Gene Tree for ENSG00000221139 (if available)

Paralogs for ENSG00000221139 Gene

No data available for Paralogs for ENSG00000221139 Gene

Variants for ENSG00000221139 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000221139 Gene

Disorders for ENSG00000221139 Gene

No disorders were found for ENSG00000221139 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000221139 Gene

Publications for ENSG00000221139 Gene

No publications were found for ENSG00000221139 Gene.

Products for ENSG00000221139 Gene

Sources for ENSG00000221139 Gene

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