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Aliases for ENSG00000213600 Gene

Subcategory (RNA class) for ENSG00000213600 Gene

lncRNA

Quality Score for this RNA gene is

1

Aliases for ENSG00000213600 Gene

  • XXcos-LUCA16.1 5

External Ids for ENSG00000213600 Gene

ORGUL Members for ENSG00000213600 Gene

Previous GeneCards Identifiers for ENSG00000213600 Gene

  • GC03P050252
  • GC03P050277

Summaries for ENSG00000213600 Gene

GeneCards Summary for ENSG00000213600 Gene

ENSG00000213600 is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000213600 Gene

Genomics for ENSG00000213600 Gene

Regulatory Elements for ENSG00000213600 Gene

Enhancers for ENSG00000213600 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G050234 2.1 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +5.6 5638 21.3 CREB3L1 AGO1 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC TBX21 MEF2D HYAL3 GNAI2 HYAL1 CYB561D2 SEMA3B SEMA3B-AS1 LSMEM2 NAT6 IFRD2 SEMA3F-AS1
GH03G050227 2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -10.5 -10496 4.6 HDGF PKNOX1 FOXA2 MLX SIN3A ARID4B DMAP1 ZBTB7B YY1 SLC30A9 HYAL3 SEMA3B-AS1 SEMA3B LSMEM2 IFRD2 GNAI2 CYB561D2 IP6K1 TUSC2 MIR5787
GH03G050233 1.2 Ensembl dbSUPER 0.4 -5.7 -5718 0.6 PKNOX1 ARID4B DMAP1 ZNF48 TCF12 FOS SP5 SREBF1 MBD2 NFIL3 SEMA3B SEMA3B-AS1 LSMEM2 MIR5787 ENSG00000213600
GH03G050258 0.9 ENCODE dbSUPER 0.4 +17.5 17546 0.2 SCRT1 CTCF ZNF654 PKNOX1 RFX1 AGO1 RAD21 SCRT2 ZNF143 SMC3 HYAL3 ENSG00000230454 ENSG00000213600
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000213600 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000213600 Gene

Chromosome:
3
Start:
50,239,618 bp from pter
End:
50,239,984 bp from pter
Size:
367 bases
Orientation:
Plus strand

Genomic View for ENSG00000213600 Gene

Genes around ENSG00000213600 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000213600 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000213600 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000213600 Gene

Proteins for ENSG00000213600 Gene

Post-translational modifications for ENSG00000213600 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000213600 Gene

Domains & Families for ENSG00000213600 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000213600 Gene

Function for ENSG00000213600 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000213600 Gene

Localization for ENSG00000213600 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000213600 Gene

Pathways & Interactions for ENSG00000213600 Gene

SuperPathways for ENSG00000213600 Gene

No Data Available

Interacting Proteins for ENSG00000213600 Gene

Gene Ontology (GO) - Biological Process for ENSG00000213600 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000213600 Gene

Drugs & Compounds for ENSG00000213600 Gene

No Compound Related Data Available

Transcripts for ENSG00000213600 Gene

mRNA/cDNA for ENSG00000213600 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000213600 Gene

No ASD Table

Relevant External Links for ENSG00000213600 Gene

GeneLoc Exon Structure for
ENSG00000213600

Expression for ENSG00000213600 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000213600 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000213600 Gene

This gene is overexpressed in Whole Blood (x9.3).
genes like me logo Genes that share expression patterns with ENSG00000213600: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000213600 Gene

Orthologs for ENSG00000213600 Gene

Evolution for ENSG00000213600 Gene

ENSEMBL:
Gene Tree for ENSG00000213600 (if available)
TreeFam:
Gene Tree for ENSG00000213600 (if available)

No data available for Orthologs for ENSG00000213600 Gene

Paralogs for ENSG00000213600 Gene

No data available for Paralogs for ENSG00000213600 Gene

Variants for ENSG00000213600 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000213600 Gene

Disorders for ENSG00000213600 Gene

No disorders were found for ENSG00000213600 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000213600 Gene

Publications for ENSG00000213600 Gene

No publications were found for ENSG00000213600 Gene.

Products for ENSG00000213600 Gene

Sources for ENSG00000213600 Gene

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