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Aliases for ENSG00000212624 Gene

Subcategory (RNA class) for ENSG00000212624 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for ENSG00000212624 Gene

  • Small Nucleolar RNA SNORA26 5
  • SNORA26 5

External Ids for ENSG00000212624 Gene

ORGUL Members for ENSG00000212624 Gene

Previous GeneCards Identifiers for ENSG00000212624 Gene

  • GC01M051963
  • GC01M052190

Summaries for ENSG00000212624 Gene

GeneCards Summary for ENSG00000212624 Gene

ENSG00000212624 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for ENSG00000212624 Gene - the ORGUL cluster for this gene includes several descriptions:

  • H_ACA_box_snoRNA: Members of the box H/ACA family contain an ACA triplet, exactly 3 nt upstream from the 3' end and an H-box in a hinge region that links two structurally similar functional domains of the molecule. Both boxes are important for snoRNA biosynthesis and function. A few box H/ACA snoRNAs are involved in rRNA processing; most others are known or predicted to participate in selection of uridine nucleosides in rRNA to be converted to pseudouridines. Site selection is mediated by direct base pairing of the snoRNA with rRNA through one or both targeting domains.

  • Small nucleolar RNA SNORA26: The snoRNA HBI-6 belong to the H/ACA family of snoRNAs, guiding the pseudouridylation of position U4522 if the 28S rRNA. HBI-6 is the human orthologue of mouse MBI-6 snoRNA.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000212624 Gene

Genomics for ENSG00000212624 Gene

Regulatory Elements for ENSG00000212624 Gene

Enhancers for ENSG00000212624 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G051688 1.3 Ensembl ENCODE 12 +33.8 33751 5.3 FOXA2 ATF1 MLX ARID4B DMAP1 YY1 ZNF121 FOS SP5 MIER2 ENSG00000212624 OSBPL9 ZCCHC11 RNU6-877P GAPDHP51 LOC105378719
GH01G051642 1.3 FANTOM5 Ensembl ENCODE 11.7 +81.1 81096 3.5 PKNOX1 JUN ZNF384 RAD21 CTBP1 ZNF366 ZSCAN5C PRDM10 FOS KLF8 NRDC OSBPL9 ENSG00000212624 RNU6-877P LOC105378719 GAPDHP51
GH01G051670 1.2 Ensembl ENCODE 11.7 +52.7 52744 2.7 PKNOX1 ATF1 ARNT FEZF1 GATA2 ELK1 FOS NCOA1 SMARCA4 PBX2 OSBPL9 ENSG00000212624 ENSG00000227070 EPS15 RNU6-877P NRDC GAPDHP51 LOC105378719
GH01G051647 1.2 Ensembl ENCODE 10.9 +76.1 76105 3.4 HDGF ATF1 YBX1 FEZF1 TCF12 GLIS2 FOS ZNF263 ZNF518A MAFF OSBPL9 ENSG00000212624 RNU6-877P NRDC ENSG00000266993 LOC105378719 GAPDHP51
GH01G051768 0.8 ENCODE 11.4 -44.4 -44376 1.5 CTCF SAP130 ARNT ZNF384 RAD21 YY1 TEAD3 ZNF316 GATA2 SCRT2 OSBPL9 NRDC ENSG00000212624 ENSG00000266993 GC01P051733
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000212624 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000212624 Gene

Chromosome:
1
Start:
51,724,775 bp from pter
End:
51,724,896 bp from pter
Size:
122 bases
Orientation:
Minus strand

Genomic View for ENSG00000212624 Gene

Genes around ENSG00000212624 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000212624 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000212624 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for ENSG00000212624 Gene

ORGUL Member Location for ENSG00000212624 gene

No data available for RefSeq DNA sequence for ENSG00000212624 Gene

Proteins for ENSG00000212624 Gene

Post-translational modifications for ENSG00000212624 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000212624 Gene

Domains & Families for ENSG00000212624 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000212624 Gene

Function for ENSG00000212624 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000212624 Gene

Localization for ENSG00000212624 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000212624 Gene

Pathways & Interactions for ENSG00000212624 Gene

SuperPathways for ENSG00000212624 Gene

No Data Available

Interacting Proteins for ENSG00000212624 Gene

Gene Ontology (GO) - Biological Process for ENSG00000212624 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000212624 Gene

Drugs & Compounds for ENSG00000212624 Gene

No Compound Related Data Available

Transcripts for ENSG00000212624 Gene

mRNA/cDNA for ENSG00000212624 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000212624 Gene

No ASD Table

Relevant External Links for ENSG00000212624 Gene

GeneLoc Exon Structure for
ENSG00000212624

Expression for ENSG00000212624 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000212624 Gene

genes like me logo Genes that share expression patterns with ENSG00000212624: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000212624 Gene

Orthologs for ENSG00000212624 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000212624 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA26 35
  • 99 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Snora26 35
  • 87 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia SNORA26 35
  • 75 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia SNORA26 35
  • 75 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA26 35
  • 66 (a)
OneToMany
chicken
(Gallus gallus)
Aves SNORA26 35
  • 65 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORA26 35
  • 68 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA26 35
  • 57 (a)
OneToMany
Species where no ortholog for ENSG00000212624 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ENSG00000212624 Gene

ENSEMBL:
Gene Tree for ENSG00000212624 (if available)
TreeFam:
Gene Tree for ENSG00000212624 (if available)

Paralogs for ENSG00000212624 Gene

No data available for Paralogs for ENSG00000212624 Gene

Variants for ENSG00000212624 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000212624 Gene

Disorders for ENSG00000212624 Gene

No disorders were found for ENSG00000212624 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000212624 Gene

Publications for ENSG00000212624 Gene

  1. RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. (PMID: 11387227) HA1ttenhofer A. … Brosius J. (EMBO J. 2001) 1

Products for ENSG00000212624 Gene

Sources for ENSG00000212624 Gene

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