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Aliases for ENSG00000200170 Gene

Subcategory (RNA class) for ENSG00000200170 Gene

Y RNA

Quality Score for this RNA gene is

1

Aliases for ENSG00000200170 Gene

  • Y RNA 5
  • Y_RNA 5

External Ids for ENSG00000200170 Gene

ORGUL Members for ENSG00000200170 Gene

Previous GeneCards Identifiers for ENSG00000200170 Gene

  • GC10P073650
  • GC10P073980

Summaries for ENSG00000200170 Gene

GeneCards Summary for ENSG00000200170 Gene

ENSG00000200170 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for ENSG00000200170 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000200170 Gene

Genomics for ENSG00000200170 Gene

Regulatory Elements for ENSG00000200170 Gene

Enhancers for ENSG00000200170 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H072241 2.3 VISTA FANTOM5 Ensembl ENCODE dbSUPER 12.3 +29.0 29049 16 MLX DMAP1 YBX1 YY1 ZNF143 SP3 ZC3H11A MEF2D SSRP1 ZNF610 ECD DNAJB12 RPL17P50 ENSG00000272599 ASCC1 DDIT4 CHST3 DNAJC9 ENSG00000200170 ANAPC16
GH10H072307 2 FANTOM5 Ensembl ENCODE dbSUPER 11.1 +88.7 88746 3 HDGF PKNOX1 ARNT ARID4B ZNF766 CBX5 FOS REST SMARCB1 ZNF592 DNAJB12 DDIT4 RPL17P50 ECD ENSG00000200170 ANAPC16 ASCC1 PSAP DDIT4-AS1
GH10H072270 1.5 ENCODE dbSUPER 11.4 +54.0 54015 8 MLX ZFP64 FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC ZC3H11A PPARGC1A ECD DNAJB12 ENSG00000227540 FAM149B1 RPL17P50 DNAJC9 ENSG00000272630 ASCC1 HMGN2P34 CDH23-AS1
GH10H072126 0.9 Ensembl ENCODE 11.5 -94.4 -94352 0 CTCF ZNF654 REST RAD21 CC2D1A NFIC PRDM6 GATA2 IKZF1 SMC3 ASCC1 ANAPC16 ENSG00000200170 SPOCK2 GC10P072225
GH10H072133 0.8 ENCODE 11.8 -87.0 -87005 0 PKNOX1 ATF1 TBL1XR1 BMI1 FEZF1 BATF ATF7 ETV6 RUNX3 CREM ASCC1 ANAPC16 ENSG00000200170 ENSG00000200294 SPOCK2 GC10P072225
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000200170 on UCSC Golden Path with GeneCards custom track

Genomic Location for ENSG00000200170 Gene

Chromosome:
10
Start:
72,220,752 bp from pter
End:
72,220,852 bp from pter
Size:
101 bases
Orientation:
Plus strand

Genomic View for ENSG00000200170 Gene

Genes around ENSG00000200170 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000200170 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000200170 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000200170 Gene

Proteins for ENSG00000200170 Gene

Post-translational modifications for ENSG00000200170 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000200170 Gene

Domains & Families for ENSG00000200170 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000200170 Gene

Function for ENSG00000200170 Gene

Phenotypes From GWAS Catalog for ENSG00000200170 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000200170 Gene

Localization for ENSG00000200170 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000200170 Gene

Pathways & Interactions for ENSG00000200170 Gene

SuperPathways for ENSG00000200170 Gene

No Data Available

Interacting Proteins for ENSG00000200170 Gene

Gene Ontology (GO) - Biological Process for ENSG00000200170 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000200170 Gene

Drugs & Compounds for ENSG00000200170 Gene

No Compound Related Data Available

Transcripts for ENSG00000200170 Gene

mRNA/cDNA for ENSG00000200170 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000200170 Gene

No ASD Table

Relevant External Links for ENSG00000200170 Gene

GeneLoc Exon Structure for
ENSG00000200170

Expression for ENSG00000200170 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000200170 Gene

genes like me logo Genes that share expression patterns with ENSG00000200170: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000200170 Gene

Orthologs for ENSG00000200170 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ENSG00000200170 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Y_RNA 34
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia Y_RNA 34
  • 79 (a)
OneToMany
dog
(Canis familiaris)
Mammalia Y_RNA 34
  • 77 (a)
ManyToMany
Species where no ortholog for ENSG00000200170 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000200170 Gene

ENSEMBL:
Gene Tree for ENSG00000200170 (if available)
TreeFam:
Gene Tree for ENSG00000200170 (if available)

Paralogs for ENSG00000200170 Gene

No data available for Paralogs for ENSG00000200170 Gene

Variants for ENSG00000200170 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000200170 Gene

Disorders for ENSG00000200170 Gene

No disorders were found for ENSG00000200170 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000200170 Gene

Publications for ENSG00000200170 Gene

No publications were found for ENSG00000200170 Gene.

Products for ENSG00000200170 Gene

Sources for ENSG00000200170 Gene

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