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Aliases for ENSG00000199815 Gene

Subcategory (RNA class) for ENSG00000199815 Gene

snoRNA

Quality Score for this RNA gene is

1

Aliases for ENSG00000199815 Gene

  • Small Nucleolar RNA SNORA17 5
  • SNORA17 5

External Ids for ENSG00000199815 Gene

ORGUL Members for ENSG00000199815 Gene

Summaries for ENSG00000199815 Gene

GeneCards Summary for ENSG00000199815 Gene

ENSG00000199815 is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for ENSG00000199815 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000199815 Gene

Genomics for ENSG00000199815 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000199815 Gene

Promoters and enhancers for ENSG00000199815 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I008961 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 12 +32.9 32935 5.1 SMAD1 FOXA2 ARID4B SIN3A ZNF2 YY1 POLR2B ZNF213 E2F8 ZNF207 RAD18 BRPF1 ENSG00000199815 SETD5 OXTR SRGAP3-AS1
GH03I008868 Enhancer 1.2 FANTOM5 Ensembl ENCODE 10.7 -61.7 -61663 2.8 JUN SIN3A ZKSCAN1 TEAD3 FOSL1 CTBP1 GATA3 POLR2A FOSL2 FOS OXTR ENSG00000199815 RAD18 GC03P008932
GH03I008954 Enhancer 0.9 Ensembl ENCODE 12 +23.6 23627 1.3 MEIS2 PKNOX1 EBF1 IRF4 NFATC1 ATF7 PRDM10 IKZF2 NR2F1 TRIM22 PIR59826 ENSG00000199815 OXTR RAD18
GH03I009301 Enhancer 1 Ensembl ENCODE 10.2 +370.6 370620 1.6 ELF3 ATF1 RB1 SIN3A BMI1 ZNF2 RAD21 ARID2 ZNF143 KLF7 GC03M009298 RAD18 ENSG00000199815 ENSG00000254485 SRGAP3-AS4 SRGAP3
GH03I009339 Enhancer 0.9 Ensembl ENCODE 9.6 +409.0 409034 1.8 SMARCE1 PKNOX1 JUN DPF2 ZIC2 FOSL1 GATA3 JUND POLR2A IKZF1 SRGAP3 THUMPD3 ENSG00000254485 RAD18 MTMR14 ENSG00000199815 TADA3 ARPC4-TTLL3 ARPC4 THUMPD3-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000199815 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000199815 Gene

Genomic Locations for ENSG00000199815 Gene
chr3:8,931,506-8,931,631
(GRCh38/hg38)
Size:
126 bases
Orientation:
Plus strand
chr3:8,973,179-8,973,316
(GRCh37/hg19)

Genomic View for ENSG00000199815 Gene

Genes around ENSG00000199815 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000199815 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000199815 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000199815 Gene

Proteins for ENSG00000199815 Gene

Post-translational modifications for ENSG00000199815 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000199815 Gene

Domains & Families for ENSG00000199815 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000199815 Gene

Function for ENSG00000199815 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000199815 Gene

Localization for ENSG00000199815 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000199815 Gene

Pathways & Interactions for ENSG00000199815 Gene

SuperPathways for ENSG00000199815 Gene

No Data Available

Interacting Proteins for ENSG00000199815 Gene

Gene Ontology (GO) - Biological Process for ENSG00000199815 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000199815 Gene

Drugs & Compounds for ENSG00000199815 Gene

No Compound Related Data Available

Transcripts for ENSG00000199815 Gene

mRNA/cDNA for ENSG00000199815 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000199815 Gene

No ASD Table

Relevant External Links for ENSG00000199815 Gene

GeneLoc Exon Structure for
ENSG00000199815

Expression for ENSG00000199815 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000199815 Gene

genes like me logo Genes that share expression patterns with ENSG00000199815: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000199815 Gene

Orthologs for ENSG00000199815 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000199815 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA43 34
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA43 34 34 34 34 34
  • 69 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia SNORA43 34
  • 65 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA43 34
  • 63 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Gm22266 34
  • 61 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia SNORA43 34
  • 57 (a)
OneToMany
Species where no ortholog for ENSG00000199815 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000199815 Gene

ENSEMBL:
Gene Tree for ENSG00000199815 (if available)
TreeFam:
Gene Tree for ENSG00000199815 (if available)

Paralogs for ENSG00000199815 Gene

No data available for Paralogs for ENSG00000199815 Gene

Variants for ENSG00000199815 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000199815 Gene

Disorders for ENSG00000199815 Gene

No disorders were found for ENSG00000199815 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000199815 Gene

Publications for ENSG00000199815 Gene

No publications were found for ENSG00000199815 Gene.

Products for ENSG00000199815 Gene

Sources for ENSG00000199815 Gene

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