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Aliases for ENSG00000199815 Gene

Subcategory (RNA class) for ENSG00000199815 Gene

snoRNA

Quality Score for this RNA gene is

1

Aliases for ENSG00000199815 Gene

  • Small Nucleolar RNA SNORA17 5
  • SNORA17 5

External Ids for ENSG00000199815 Gene

ORGUL Members for ENSG00000199815 Gene

Summaries for ENSG00000199815 Gene

GeneCards Summary for ENSG00000199815 Gene

ENSG00000199815 is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000199815 Gene

Genomics for ENSG00000199815 Gene

Regulatory Elements for ENSG00000199815 Gene

Enhancers for ENSG00000199815 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F008868 1.3 FANTOM5 Ensembl ENCODE 10.7 -61.7 -61663 2.8 JUN SIN3A TEAD3 ZKSCAN1 GATA3 CTBP1 FOS FOSL2 MAFK BHLHE40 OXTR ENSG00000199815 RAD18 GC03P008932
GH03F008961 1.1 ENCODE 12 +32.9 32936 5.1 CREB3L1 ARID4B SIN3A ZNF2 YY1 ZNF207 ZNF143 KLF13 ZNF263 SP3 RNU6-882P ENSG00000199815 RAD18 OXTR SRGAP3-AS1
GH03F008954 1 Ensembl ENCODE 12 +23.7 23678 1.4 CTCF PKNOX1 SAP130 ARID4B EBF1 RAD21 MTA2 HLF MXD4 USF2 ENSG00000199815 OXTR RAD18 PIR59826
GH03F009301 1.1 Ensembl ENCODE 10.2 +370.7 370667 1.7 ELF3 BMI1 ZNF2 RAD21 ZNF143 KLF7 ZNF391 FOS CREM KLF13 RAD18 ENSG00000199815 ENSG00000254485 GC03M009298 SRGAP3-AS4
GH03F009026 1 Ensembl ENCODE 10.5 +96.0 95979 2.9 CTCF TRIM22 REST FEZF1 ZBTB40 ZIC2 RAD21 GATA3 KLF16 ZNF341 RAD18 ENSG00000199815 GC03M009001 GC03P009098
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000199815 on UCSC Golden Path with GeneCards custom track

Promoters for ENSG00000199815 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001844896 -5 599 USF1 L3MBTL2 JUN NFYC DPF2 REST ARID1B FOSL1 RAD51 ATF3

Genomic Location for ENSG00000199815 Gene

Chromosome:
3
Start:
8,931,506 bp from pter
End:
8,931,631 bp from pter
Size:
126 bases
Orientation:
Plus strand

Genomic View for ENSG00000199815 Gene

Genes around ENSG00000199815 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000199815 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000199815 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000199815 Gene

Proteins for ENSG00000199815 Gene

Post-translational modifications for ENSG00000199815 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000199815 Gene

Domains & Families for ENSG00000199815 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000199815 Gene

Function for ENSG00000199815 Gene

Animal Model Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000199815 Gene

Localization for ENSG00000199815 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000199815 Gene

Pathways & Interactions for ENSG00000199815 Gene

SuperPathways for ENSG00000199815 Gene

No Data Available

Interacting Proteins for ENSG00000199815 Gene

Gene Ontology (GO) - Biological Process for ENSG00000199815 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000199815 Gene

Transcripts for ENSG00000199815 Gene

mRNA/cDNA for ENSG00000199815 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000199815 Gene

No ASD Table

Relevant External Links for ENSG00000199815 Gene

GeneLoc Exon Structure for
ENSG00000199815

Expression for ENSG00000199815 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000199815 Gene

genes like me logo Genes that share expression patterns with ENSG00000199815: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ENSG00000199815 Gene

Orthologs for ENSG00000199815 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000199815 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA43 35
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA43 35 35 35 35 35
  • 69 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia SNORA43 35
  • 65 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA43 35
  • 63 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Gm22266 35
  • 61 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia SNORA43 35
  • 57 (a)
OneToMany
Species where no ortholog for ENSG00000199815 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000199815 Gene

ENSEMBL:
Gene Tree for ENSG00000199815 (if available)
TreeFam:
Gene Tree for ENSG00000199815 (if available)

Paralogs for ENSG00000199815 Gene

No data available for Paralogs for ENSG00000199815 Gene

Variants for ENSG00000199815 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for ENSG00000199815 Gene

Disorders for ENSG00000199815 Gene

No disorders were found for ENSG00000199815 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000199815 Gene

Publications for ENSG00000199815 Gene

No publications were found for ENSG00000199815 Gene.

Products for ENSG00000199815 Gene

Sources for ENSG00000199815 Gene

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