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Aliases for ENSG00000116883 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000116883 Gene

  • RP11-268J15.5 5

External Ids for ENSG00000116883 Gene

Previous GeneCards Identifiers for ENSG00000116883 Gene

  • GC01P036561
  • GC01P036789

Summaries for ENSG00000116883 Gene

GeneCards Summary for ENSG00000116883 Gene

ENSG00000116883 is an RNA Gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000116883 Gene

Genomics for ENSG00000116883 Gene

Regulatory Elements for ENSG00000116883 Gene

Enhancers for ENSG00000116883 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G036169 1.6 FANTOM5 Ensembl ENCODE dbSUPER 19.2 -149.1 -149087 10.1 BCOR CTCF MXI1 PTBP1 JUN ZSCAN4 ZMYM3 RBBP5 BMI1 ZIC2 MAP7D1 ENSG00000116883 COL8A2 ADPRHL2 TEKT2 LOC100128093 SH3D21 EVA1B LSM10 RNU4-27P
GH01G036237 1.5 Ensembl ENCODE dbSUPER 17.8 -84.3 -84261 3.8 PKNOX1 FOXA2 MLX ARID4B DMAP1 ZNF2 ZNF143 KLF13 DEK PAF1 ENSG00000116883 COL8A2 TRAPPC3 MAP7D1 SH3D21 EVA1B ADPRHL2 LOC100128093 TEKT2 ENSG00000201448
GH01G036385 1.4 ENCODE dbSUPER 17.4 +64.4 64400 7.8 MLX AGO1 FEZF1 DMAP1 YY1 ZNF416 ZNF143 ZNF263 SP3 NFYC EVA1B THRAP3 LOC105378647 ENSG00000116883 SH3D21 ENSG00000201448 OSCP1 TRAPPC3 STK40 LSM10
GH01G036320 1.1 ENCODE 20.9 -1.0 -1024 5.4 HDGF PKNOX1 CREB3L1 ARNT AGO1 ZFP64 ARID4B SIN3A YY1 ZNF766 ENSG00000116883 EVA1B GC01P036318
GH01G036257 1.1 ENCODE dbSUPER 18.5 -65.5 -65501 2.4 KLF17 FEZF1 ZNF2 ZNF366 SCRT2 KLF7 ETV6 CEBPB ZEB2 ZNF843 ENSG00000116883 SH3D21 EVA1B TRAPPC3 MAP7D1 LSM10 ADPRHL2 TEKT2 LOC100128093 ENSG00000201448
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ENSG00000116883 on UCSC Golden Path with GeneCards custom track

Promoters for ENSG00000116883 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000004792 -534 1601 PKNOX1 ARNT ZFP64 SIN3A ZNF121 GLIS2 KDM4B ZNF263 ZHX2 MXD4

Genomic Location for ENSG00000116883 Gene

Chromosome:
1
Start:
36,323,734 bp from pter
End:
36,329,221 bp from pter
Size:
5,488 bases
Orientation:
Plus strand

Genomic View for ENSG00000116883 Gene

Genes around ENSG00000116883 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000116883 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000116883 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000116883 Gene

Proteins for ENSG00000116883 Gene

Post-translational modifications for ENSG00000116883 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000116883 Gene

Domains & Families for ENSG00000116883 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000116883 Gene

Function for ENSG00000116883 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000116883 Gene

Localization for ENSG00000116883 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000116883 Gene

Pathways & Interactions for ENSG00000116883 Gene

SuperPathways for ENSG00000116883 Gene

No Data Available

Interacting Proteins for ENSG00000116883 Gene

Gene Ontology (GO) - Biological Process for ENSG00000116883 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000116883 Gene

Drugs & Compounds for ENSG00000116883 Gene

No Compound Related Data Available

Transcripts for ENSG00000116883 Gene

mRNA/cDNA for ENSG00000116883 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000116883 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7a · 7b ^ 8a · 8b · 8c ^ 9 ^ 10a · 10b
SP1:
SP2: - -
SP3: -
SP4:

Relevant External Links for ENSG00000116883 Gene

GeneLoc Exon Structure for
ENSG00000116883

Expression for ENSG00000116883 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000116883 Gene

genes like me logo Genes that share expression patterns with ENSG00000116883: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000116883 Gene

Orthologs for ENSG00000116883 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for ENSG00000116883 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 35
  • 100 (a)
OneToOne
Species where no ortholog for ENSG00000116883 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000116883 Gene

ENSEMBL:
Gene Tree for ENSG00000116883 (if available)
TreeFam:
Gene Tree for ENSG00000116883 (if available)

Paralogs for ENSG00000116883 Gene

No data available for Paralogs for ENSG00000116883 Gene

Variants for ENSG00000116883 Gene

Variation tolerance for ENSG00000116883 Gene

Gene Damage Index Score: 1.21; 24.29% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Relevant External Links for ENSG00000116883 Gene

Disorders for ENSG00000116883 Gene

No disorders were found for ENSG00000116883 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000116883 Gene

Publications for ENSG00000116883 Gene

No publications were found for ENSG00000116883 Gene.

Products for ENSG00000116883 Gene

Sources for ENSG00000116883 Gene

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