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Aliases for EIPR1-IT1 Gene

Subcategory (RNA class) for EIPR1-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for EIPR1-IT1 Gene

  • EIPR1 Intronic Transcript 1 2 3
  • TSSC1 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • TSSC1 Intronic Transcript 1 2 5
  • TSSC1-IT1 3 5

External Ids for EIPR1-IT1 Gene

Previous HGNC Symbols for EIPR1-IT1 Gene

  • TSSC1-IT1

Summaries for EIPR1-IT1 Gene

GeneCards Summary for EIPR1-IT1 Gene

EIPR1-IT1 (EIPR1 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for EIPR1-IT1 Gene

Genomics for EIPR1-IT1 Gene

Regulatory Elements for EIPR1-IT1 Gene

Enhancers for EIPR1-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G003302 1.2 Ensembl ENCODE 0.7 -2.1 -2142 1.3 ATF1 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 ZNF48 YY1 SLC30A9 RPS7 EIPR1-IT1 GC02M003336
GH02G003276 0.5 FANTOM5 0.3 +24.5 24466 0.2 EGR1 FOS EGR2 EIPR1 GC02M003270 EIPR1-IT1
GH02G003334 0.4 ENCODE 0.3 -33.8 -33795 1.7 ZBTB33 TRAPPC12 GC02M003336 EIPR1-IT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around EIPR1-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for EIPR1-IT1 Gene

Chromosome:
2
Start:
3,298,341 bp from pter
End:
3,301,465 bp from pter
Size:
3,125 bases
Orientation:
Minus strand

Genomic View for EIPR1-IT1 Gene

Genes around EIPR1-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
EIPR1-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EIPR1-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for EIPR1-IT1 Gene

Proteins for EIPR1-IT1 Gene

Post-translational modifications for EIPR1-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for EIPR1-IT1 Gene

Domains & Families for EIPR1-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for EIPR1-IT1 Gene

Function for EIPR1-IT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for EIPR1-IT1 Gene

Localization for EIPR1-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for EIPR1-IT1 Gene

Pathways & Interactions for EIPR1-IT1 Gene

SuperPathways for EIPR1-IT1 Gene

No Data Available

Interacting Proteins for EIPR1-IT1 Gene

Gene Ontology (GO) - Biological Process for EIPR1-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for EIPR1-IT1 Gene

Drugs & Compounds for EIPR1-IT1 Gene

No Compound Related Data Available

Transcripts for EIPR1-IT1 Gene

mRNA/cDNA for EIPR1-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for EIPR1-IT1 Gene

No ASD Table

Relevant External Links for EIPR1-IT1 Gene

GeneLoc Exon Structure for
EIPR1-IT1
ECgene alternative splicing isoforms for
EIPR1-IT1

Expression for EIPR1-IT1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for EIPR1-IT1 Gene

Orthologs for EIPR1-IT1 Gene

Evolution for EIPR1-IT1 Gene

ENSEMBL:
Gene Tree for EIPR1-IT1 (if available)
TreeFam:
Gene Tree for EIPR1-IT1 (if available)

No data available for Orthologs for EIPR1-IT1 Gene

Paralogs for EIPR1-IT1 Gene

No data available for Paralogs for EIPR1-IT1 Gene

Variants for EIPR1-IT1 Gene

Relevant External Links for EIPR1-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
EIPR1-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for EIPR1-IT1 Gene

Disorders for EIPR1-IT1 Gene

No disorders were found for EIPR1-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for EIPR1-IT1 Gene

Publications for EIPR1-IT1 Gene

No publications were found for EIPR1-IT1 Gene.

Products for EIPR1-IT1 Gene

Sources for EIPR1-IT1 Gene

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