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Aliases & Descriptions for EIF4EBP1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| 4E-BP1 1, 2, 3 | | 4EBP1 2, 5 | | BP-1 2 | | MGC4316 2 | | PHAS-I 1, 2, 3 |
| | | Descriptions |
|---|
Phosphorylated heat- and acid-stable protein regulated by insulin 1 2, 3 | | eIF4E-binding protein 1 2, 3 | eukaryotic translation initiation factor 4E binding protein 1 2 |
|
| | Search outside databases for aliases for EIF4EBP1 genePrevious GC identifers: GC04P9B0162 GC04M9B0161 GC08M9E0078 |
Summaries for EIF4EBP1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for EIF4EBP1: This gene encodes one member of a family of translation repressor proteins. The protein directly interacts with eukaryotic translation initiation factor 4E (eIF4E), which is a limiting component of the multisubunit complex that recruits 40S ribosomal subunits to the 5' end of mRNAs. Interaction of this protein with eIF4E inhibits complex assembly and represses translation. This protein is phosphorylated in response to various signals including UV irradiation and insulin signaling, resulting in its dissociation from eIF4E and activation of mRNA translation. [provided by RefSeq] UniProtKB/Swiss-Prot: 4EBP1_HUMAN, Q13541Function: Regulates eIF4E activity by preventing its assembly into the eIF4F complex. Mediates the regulation of protein translation by hormones, growth factors and other stimuli that signal through the MAP kinase pathwayGene Wiki entry for EIF4EBP1 |
Genomic Location for EIF4EBP1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the EIF4EBP1 gene 
Entrez Gene cytogenetic band: 8p12 Ensembl cytogenetic band: 8p12 HGNC cytogenetic band: 8p12EIF4EBP1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 8 GeneLoc Exon Structure GeneLoc location for GC08P038007:
(about GC identifiers)
Start:
|
38,007,177 bp from pter |
End:
|
38,037,040 bp from pter |
Size:
|
29,864 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000008.9 NT_007995.14
| Proteins for EIF4EBP1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: 4EBP1_HUMAN, Q13541 (See
protein sequence)Recommended Name: Eukaryotic translation initiation factor 4E-binding protein 1 Size: 118 amino acids; 12580 Da
Subunit: Nonphosphorylated EIF4EBP1 competes with EIF4G1/EIF4G3 to interact with EIF4E; insulin stimulated MAP-kinase (MAPK1 and MAPK3) phosphorylation of EIF4EBP1 causes dissociation of the complex allowing EIF4G1/EIF4G3 to bind and consequent initiation of translation. Rapamycin can attenuate insulin stimulation, mediated by FKBPs
PDB structures from and Proteopedia :1WKW (3D)
 2JGB (3D)
 2JGC (3D)
 2V8W (3D)
 2V8X (3D)
 2V8Y (3D)
 
Secondary accessions: Q6IBN3Post-translational modifications:
Phosphorylated on serine and threonine residues in response to insulin, EGF and PDGF. Phosphorylated upon DNA damage, probably by ATM or ATR1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_004086.1
ENSEMBL proteins: ENSP00000340691
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
1 Gene Ontology (GO) cellular component term (links to tree view): About this table
Antibodies for EIF4EBP1: Assays for EIF4EBP1: | Protein
Domains/ Families for EIF4EBP1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q13541
ProtoNet protein and cluster: Q13541 1 Blocks protein family: IPB008606 Eukaryotic translation initiation factor 4E binding
UniProtKB/Swiss-Prot: 4EBP1_HUMAN, Q13541Similarity: Belongs to the eIF4E-binding protein family | Gene Function for EIF4EBP1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_004095
Applied Biosystems Silencer® siRNAs for EIF4EBP1
Sigma-Aldrich siRNA for EIF4EBP1  Sigma-Aldrich shRNA for EIF4EBP1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_004095                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_004095                                  untagged cDNA clone in CMV expression vector: NM_004095 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_004095
UniProtKB/Swiss-Prot: 4EBP1_HUMAN, Q13541Function: Regulates eIF4E activity by preventing its assembly into the eIF4F complex. Mediates the regulation of protein translation by hormones, growth factors and other stimuli that signal through the MAP kinase pathwayGenatlas biochemistry entry for EIF4EBP1:eukaryotic translation initiation factor 4E,binding protein 1,implicated in the progression of cancer4 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Eif4ebp1):
2 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for EIF4EBP1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
5/6 Sigma-Aldrich "Your Favorite Gene" Pathways for EIF4EBP1 (Your Favorite Gene powered by Ingenuity) (see all 6
) 
Gene Network CentralTM Interacting Genes and Proteins Network for EIF4EBP1 
5/42 Interacting proteins for EIF4EBP1 (ENSP000003406913 Q135411, 2) via UniProtKB, MINT, and/or STRING (see all 42
)About this table
2 Gene Ontology (GO) biological process terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0008286 | insulin receptor signaling pathway |
IEA | -- | | GO:0045947 | negative regulation of translational initiation |
IEA | -- | About this table
|
Drugs & Compounds for EIF4EBP1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for EIF4EBP1 10/24 Novoseek chemical compound relationships for EIF4EBP1 gene (see all 24
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| m7gtp |
83.92 |
10 |
10772338 (3), 10864916 (1), 17440067 (1), 9504423 (1) (see all 5) |
| wortmannin |
73.24 |
26 |
8633019 (2), 10580837 (2), 9468502 (1), 9160663 (1) (see all 18) |
| phosphatidylinositol |
67.18 |
17 |
18810319 (2), 9468502 (1), 10681523 (1), 15520204 (1) (see all 13) |
| phosphoinositide |
57.07 |
3 |
14769825 (1), 12529177 (1) |
| threonine |
50.66 |
10 |
14522890 (1), 9204908 (1), 9020107 (1), 9472019 (1) (see all 7) |
| pd 98,059 |
49.19 |
4 |
11023817 (1), 11855825 (1), 11777913 (1), 16990847 (1) |
| leucine |
49.05 |
20 |
10723090 (3), 9774438 (2), 9814971 (2), 10206976 (1) (see all 13) |
| ifn-alpha |
36.48 |
5 |
17114181 (2), 15056668 (1), 15790787 (1) |
| alpha-ketoisocaproate |
36.25 |
1 |
9774438 (1) |
| okadaic acid |
33.17 |
7 |
9248697 (2), 10893325 (1), 10504405 (1) |
About this table
|
Transcripts for EIF4EBP1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_004095
Sigma-Aldrich siRNA for EIF4EBP1  Sigma-Aldrich shRNA for EIF4EBP1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_004095 REFSEQ mRNAs for EIF4EBP1 gene: NM_004095.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_004095               OriGene GFP tagged cDNA clone in CMV expression vector: NM_004095                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_004095                                  untagged cDNA clone in CMV expression vector: NM_004095  Additional cDNA sequence: AB044548.1 AK312011.1 BC004459.1 BC058073.1 BT007162.1 CR456769.1 L36055.1 7 DOTS entries: DT.445314 DT.100785084 DT.121465783 DT.95318728 DT.100785083 DT.92437830 DT.97825318 24/220 AceView cDNA sequences (see all 220
):BE781403 BG033923 AI571181 BM552477 BG761376 BG251612 BM701955 AI199543 BC004459 BM853796 BG574763 NM_004095 CA427014 BP379870 BE794824 BC058073 AB044548 L36055 BM014495 CB105930 AI341842 BM795375 BI861025 BE795061
highest scoring ESTs for EIF4EBP1:AI026669 L36055 AA147340 AA147371 AA290674 AA291063 AA401092 AA418646 AA643157 AA676503 Unigene Cluster for EIF4EBP1: Eukaryotic translation initiation factor 4E binding protein 1 Hs.411641 [show with all ESTs]Unigene Representative Sequence: BM564526
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000338825
|
Expression for EIF4EBP1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| EIF4EBP1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for EIF4EBP1
1 / 2 / 3 4 probe-sets matching EIF4EBP1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: GAAGCCAGCC
SOURCE GeneReport for Unigene cluster: Hs.411641
Expression variation in blood from EXPOLDB for EIF4EBP1 |
Orthologs for EIF4EBP1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for EIF4EBP1 gene from 5/7 species (see all 7
)
About this table Species with no ortholog for EIF4EBP1
ENSEMBL Gene Tree for EIF4EBP1 | Paralogs for EIF4EBP1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for EIF4EBP1 gene
- EIF4EBP22
Pseudogenes
- 2 related pseudogenes
|
SNPs/Variants for EIF4EBP1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for EIF4EBP1 (up to first 250kb)
|
Disorders & Mutations for EIF4EBP1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 602223
10/30 Novoseek disease relationships for EIF4EBP1 gene (see all 30
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| tuberous sclerosis |
60.82 |
1 |
12384518 (1) |
| ataxia telangiectasia |
40.28 |
3 |
11114166 (1), 11146653 (1) |
| tumors |
37.89 |
40 |
19251093 (5), 18708753 (2), 16375881 (2), 15501954 (2) (see all 20) |
| cancer |
36.70 |
12 |
16652388 (3), 17230506 (1), 17440067 (1), 18644990 (1) (see all 7) |
| rhabdomyosarcoma |
36.47 |
5 |
11410517 (2), 18708753 (1), 17585318 (1), 15735038 (1) |
| glioblastoma |
28.08 |
2 |
19251093 (1) |
| hyperinsulinemia |
27.43 |
4 |
11134159 (2), 12169454 (1), 7629182 (1) |
| retinoblastoma |
25.87 |
1 |
11426655 (1) |
| myeloid leukemia chronic |
24.26 |
1 |
14522890 (1) |
| lymphoma |
23.88 |
2 |
19176054 (1), 15010827 (1) |
About this table
Human Genome Epidemiology Navigator: EIF4EBP1 (3 documents)
|
Medical News for EIF4EBP1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for EIF4EBP1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/376 PubMed articles for EIF4EBP1 gene (see all 376
):- Insulin-dependent stimulation of protein synthesis by phosphorylation of a regulator of 5'-cap function. (PubMed id 7935836)2, 3, 4 Pause A.... Sonenberg N. (1994)
- Structural basis for mRNA Cap-Binding regulation of eukaryotic initiation factor 4E by 4E-binding protein, studied by spectroscopic, X-ray crystal structural, and molecular dynamics simulation methods. (PubMed id 16271312)1, 3, 4 Tomoo K....Ishida T. (2005)
- Repression of cap-dependent translation by 4E-binding protein 1: competition with p220 for binding to eukaryotic initiation factor- 4E. (PubMed id 8521827)1, 3, 4 Haghighat A.... Sonenberg N. (1995)
- Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983)3, 4 Olsen J.V....Mann M. (2006)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides. (PubMed id 12665801)3, 4 Gevaert K.... Vandekerckhove J. (2003)
- Two motifs in the translational repressor PHAS-I required for efficient phosphorylation by mammalian target of rapamycin and for recognition by raptor. (PubMed id 12665511)1, 3 Choi K.M....Lawrence J.C. (2003)
- Phosphorylation of 4E-BP1 is mediated by the p38/MSK1 pathway in response to UVB irradiation. (PubMed id 11777913)1, 3 Liu G....Dong Z. (2002)
- Regulation of 4E-BP1 phosphorylation: a novel two-step mechanism. (PubMed id 10364159)1, 3 Gingras A.C....Sonenberg N. (1999)
- Phosphatidylinositol 3-kinase-dependent transcriptional silencing of the translational repressor 4E-BP1. (PubMed id 18810319)1, 3 Azar R....Pyronnet S. (2008)
|
Search for EIF4EBP1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing EIF4EBP1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing EIF4EBP1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing EIF4EBP1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for EIF4EBP1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for EIF4EBP1:

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Incremental update: 13 Oct 2009
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