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Aliases & Descriptions for EIF4E
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases CBP 2 EIF4E1 1 , 2 EIF4EL1 2 , 3 , 5 EIF4F 2 , 3 MGC111573 2 eIF-4E 3 eIF4E 3
Descriptions eIF-4F 25 kDa subunit 2 , 3 eukaryotic translation initiation factor 4E 2 eukaryotic translation initiation factor 4E-like 1 2 mRNA cap-binding protein 2 , 3
Search outside databases for aliases for EIF4E genePrevious GC identifers: GC04M100193 GC04M100259 GC04M100158
Summaries for EIF4E (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for EIF4E : All eukaryotic cellular mRNAs are blocked at their 5-prime ends with the 7-methylguanosine capstructure, m7GpppX (where X is any nucleotide). This structure is involved in several cellularprocesses including enhanced translational efficiency, splicing, mRNA stability, and RNA nuclearexport. EIF4E is a eukaryotic translation initiation factor involved in directing ribosomes to thecap structure of mRNAs. It is a 24-kD polypeptide that exists as both a free form and as part of amultiprotein complex termed EIF4F. The EIF4E polypeptide is the rate-limiting component of theeukaryotic translation apparatus and is involved in the mRNA-ribosome binding step of eukaryoticprotein synthesis. The other subunits of EIF4F are a 50-kD polypeptide, termed EIF4A (see MIM601102), that possesses ATPase and RNA helicase activities, and a 220-kD polypeptide, EIF4G (MIM600495) (Rychlik et al., 1987 [PubMed 3469651]).[supplied by OMIM] UniProtKB/Swiss-Prot: IF4E_HUMAN, P06730 Function : Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step inthe initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding ofthe mRNAs secondary structures
Gene Wiki entry for EIF4E
Genomic Location for EIF4E
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the EIF4E gene Entrez Gene cytogenetic band: 4q21-q25 Ensembl cytogenetic band: 4q23 HGNC cytogenetic band: 4q21-q25 EIF4E Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 4 GeneLoc Exon Structure
GeneLoc location for GC04M100046:
(about GC identifiers )
Start:
100,020,235 bp from pter
End:
100,070,139 bp from pter
Size:
49,905 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000004.10 NT_016354.18 Proteins for EIF4E
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: IF4E_HUMAN, P06730 (See
protein sequence )Recommended Name: Eukaryotic translation initiation factor 4E Size : 217 amino acids; 25097 Da
Subunit : eIF4F is a multi-subunit complex, the composition of which varies with external andinternal environmental conditions. It is composed of at least EIF4A, EIF4E and EIF4G1/EIF4G3.EIF4E is also known to interact with other partners. The interaction with EIF4ENIF1 mediates theimport into the nucleus. Nonphosphorylated EIF4EBP1, EIF4EBP2 and EIF4EBP3 compete withEIF4G1/EIF4G3 to interact with EIF4E; insulin stimulated MAP-kinase (MAPK1 and MAPK3)phosphorylation of EIF4EBP1 causes dissociation of the complex allowing EIF4G1/EIF4G3 to bind andconsequent initiation of translation. Rapamycin can attenuate insulin stimulation, mediated byFKBPs. Interacts mutually exclusive with EIF4A1 and EIF4A2. Interacts with NGDN and PIWIL2 (Bysimilarity). Interacts with Lassa virus Z protein
Caution : Was originally thought to be phosphorylated on Ser-53 (PubMed:3112145); this was latershown to be wrong (PubMed:7665584)
PDB structures from and Proteopedia : 1IPB (3D)
 1IPC (3D)
 1WKW (3D)
 2GPQ (3D)
 2V8W (3D)
 2V8X (3D)
 2V8Y (3D)
 
Secondary accessions : Q96E95
Post-translational modifications:
Phosphorylation increases the ability of the protein to bind to mRNA caps and to form the eIF4Fcomplex1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (3 alternative transcripts):
NP_001124150.1 NP_001124151.1 NP_001959.1 ENSEMBL proteins: ENSP00000378376 ENSP00000280892 Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: EIF4E 3 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for EIF4E: Invitrogen Antibodies for EIF4E Millipore Mono- and Polyclonal Antibodies for the study of EIF4E Sigma-Aldrich Antibodies for EIF4E R&D Systems Antibodies for EIF4E Cell Signaling Technology (CST) Antibodies for EIF4E   Antibodies from Abcam (eIF4E ), each with their Abpromise SM Monoclonal and Polyclonal Antibodies from Abnova (EIF4E ) Novus Biologicals Antibodies for EIF4E
Assays for EIF4E:
Protein
Domains/ Families for EIF4E(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P06730 ProtoNet protein and cluster: P06730
1 Blocks protein family : IPB001040 Eukaryotic translation initiation factor 4E (eIF-4E) UniProtKB/Swiss-Prot: IF4E_HUMAN, P06730 Similarity : Belongs to the eukaryotic initiation factor 4E family
Gene Function for EIF4E
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_001968 Applied Biosystems Silencer ® siRNAs for EIF4E Sigma-Aldrich siRNA for EIF4E Sigma-Aldrich shRNA for EIF4E Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001130678                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001130678                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001130678  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001130679 UniProtKB/Swiss-Prot: IF4E_HUMAN, P06730 Function : Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step inthe initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding ofthe mRNAs secondary structures
Genatlas biochemistry entry for EIF4E :eukaryotic translation initiation factor 4E,amplified in head and neck squamous cell carcinomas 3 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for EIF4E
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/6 Sigma-Aldrich "Your Favorite Gene" Pathways for EIF4E (Your Favorite Gene powered by Ingenuity) (see all 6
) Gene Network CentralTM Interacting Genes and Proteins Network for EIF4E 5/199 Interacting proteins for EIF4E (P06730 1 , 2 ENSP00000280892 3 ) via UniProtKB, MINT, and/or STRING (see all 199
)About this table 3 Gene Ontology (GO) biological process terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0006413 translational initiation
IEA -- GO:0006417 regulation of translation
IEA -- GO:0044419 interspecies interaction between organisms
IEA --
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Drugs & Compounds for EIF4E (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for EIF4E 10/39 Novoseek chemical compound relationships for EIF4E gene (see all 39
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
m7gtp
93.18
43
10772338 (3), 11959093 (3), 11879179 (3), 7666354 (2) (see all 22 )
7-methylguanosine
84.46
17
15601771 (2), 18367715 (2), 16043507 (1), 10216941 (1) (see all 9 )
7-methyl-gdp
80.60
9
9478191 (2), 9200613 (2), 10349744 (1)
m(7)gpppg
63.07
2
11156290 (1), 12356315 (1)
wortmannin
59.25
10
15683719 (1), 9160663 (1), 11855825 (1), 15292274 (1) (see all 10 )
ribavirin triphosphate
58.94
2
16043507 (1), 16131589 (1)
5-bromo-4-chloro-3-indolyl phosphate
58.20
1
9605667 (1)
7-methylguanine
56.60
3
10349744 (1)
phosphatidylinositol
52.12
12
11778052 (1), 17724079 (1), 11855825 (1), 12193593 (1) (see all 8 )
ornithine
44.46
4
10206976 (1), 10928042 (1), 8577715 (1), 19134194 (1)
About this table
Transcripts for EIF4E(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
OriGene , Expression Assays from Applied Biosystems )About This Section
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_001968 Sigma-Aldrich siRNA for EIF4E Sigma-Aldrich shRNA for EIF4E Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001130678 NM_001130679 NM_001968
REFSEQ mRNAs for EIF4E gene (3 alternative transcripts): NM_001130678.1 NM_001130679.1 NM_001968.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001130678 NM_001130679 NM_001968
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001130678                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001130678                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001130678  
Additional cDNA sequence: AK295083.1 AK300982.1 BC012611.1 BC035166.1 BC043226.1 BC107715.1 CR600733.1 CR603932.1 CR606387.1 CR623172.1 M15353.1
24 DOTS entries : DT.91841951 DT.102831086 DT.40222616 DT.121245794 DT.100674184 DT.95364700 DT.100674186 DT.121245767 DT.121245773 DT.405888 DT.121245764 DT.121245812 DT.310004 DT.92024643 DT.97854792 DT.100674178 DT.100835561 DT.121245754 DT.121245758 DT.95193233 DT.120950180 DT.120950183 DT.121245779 DT.99967230
24/485 AceView cDNA sequences (see all 485
):AV711283 BP377778 CB158948 BM754582 AL557603 BF447428 BQ022976 AI751010 BM788059 CA438559 CA441675 BM785456 BP377777 AA928352 CB151890 AA648270 BM803630 BF594389 BM476326 BM791786 BM470190 CA442757 BM755971 BU195126
highest scoring ESTs for EIF4E :AA913840 AL698728 AU118135 AU129730 AU130285 AU133617 AU139526 BC012611 BC035166 BC043226
Unigene Cluster for EIF4E: Eukaryotic translation initiation factor 4E Hs.249718 [show with all ESTs ] Unigene Representative Sequence: NM_001130679 GeneLoc Exon Structure 4 Alternative Splicing Database (ASD) splice patterns (SP) for EIF4E ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8a · 8b ^ 9 ^ 10 SP1 :     -       -                 SP2 :       -     -                 SP3 :                           SP4 :     -   -                    
About this scheme ECgene alternative splicing isoforms for EIF4E 2 Ensembl transcripts including schematic representations : ENST00000394918
ENST00000280892
Expression for EIF4E
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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EIF4E expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for EIF4E 1 / 2 / 3
12 probe-sets matching EIF4E gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: TAACATTGGTSOURCE GeneReport for Unigene cluster: Hs.249718 Expression variation in blood from EXPOLDB for EIF4E
Orthologs for EIF4E
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for EIF4E gene from 5/20 species (see all 20
)
About this table Species with no ortholog for EIF4E ENSEMBL Gene Tree for EIF4E Paralogs for EIF4E (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for EIF4E gene EIF4E3 2 EIF4E1B 2 EIF4E2 2 Pseudogenes 4 related pseudogenes
SNPs/Variants for EIF4E (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for EIF4E (up to first 250kb)
Disorders & Mutations for EIF4E
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 133440 10/54 Novoseek disease relationships for EIF4E gene (see all 54
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
promyelocytic leukemia
54.24
8
12167712 (1), 12438698 (1), 11959093 (1), 11963652 (1) (see all 7 )
vocal cord polyp
52.50
4
12838026 (1), 15510630 (1)
hnscc
48.48
29
10077200 (4), 10383835 (3), 9247311 (3), 10561370 (2) (see all 9 )
neoplastic transformation
46.38
10
16024782 (2), 8246956 (1), 8529209 (1), 15894932 (1) (see all 6 )
squamous cell cancer
42.00
5
10910074 (1), 10561370 (1), 11745262 (1), 16280668 (1) (see all 5 )
cancer recurrence
41.05
30
18719964 (7), 16192819 (4), 11981220 (4), 9605667 (3) (see all 8 )
cancer
39.45
115
17091471 (4), 19367274 (4), 16633004 (4), 16280668 (3) (see all 54 )
laryngeal squamous cell carcinoma
35.30
10
12838026 (3), 16124648 (2), 15510630 (2), 12889116 (1)
tumors
34.52
163
10928042 (5), 16280668 (5), 16260273 (4), 10077200 (4) (see all 67 )
breast carcinoma
27.05
29
18327707 (5), 9191527 (4), 9605667 (3), 15193258 (2) (see all 10 )
About this table Tumor Gene Database : EIF4E
Medical News for EIF4E (Possibly Related Articles in
Doctor's Guide )
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--
Publications for EIF4E (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/543 PubMed articles for EIF4E gene (see all 543
): Human eukaryotic translation initiation factor 4G (eIF4G) recruits mnk1 to phosphorylate eIF4E. (PubMed id 9878069) 1, 3, 4 Pyronnet S....Sonenberg N. (1999) Repression of cap-dependent translation by 4E-binding protein 1: competition with p220 for binding to eukaryotic initiation factor- 4E. (PubMed id 8521827) 1, 3, 4 Haghighat A.... Sonenberg N. (1995) Role of Ser-53 phosphorylation in the activity of human translation initiation factor eIF-4E in mammalian and yeast cells. (PubMed id 7590282) 1, 3, 4 Zhang Y.... Schneider R.J. (1995) Crystal structures of 7-methylguanosine 5'-triphosphate (m(7)GTP)- and P(1)-7-methylguanosine-P(3)-adenosine-5',5'-triphosphate (m(7)GpppA)-bound human full-length eukaryotic initiation factor 4E: biological importance of the C-terminal flexible region. (PubMed id 11879179) 1, 3, 4 Tomoo K.... Miura K. (2002) The mitogen-activated protein kinase signal-integrating kinase Mnk2 is a eukaryotic initiation factor 4E kinase with high levels of basal activity in mammalian cells. (PubMed id 11154262) 1, 3, 4 Scheper G.C.... Proud C.G. (2001) Assignment of two of the translation initiation factor-4E (EIF4EL1 and EIF4EL2) genes to human chromosomes 4 and 20. (PubMed id 1916814) 1, 2, 3 Pelletier J....Housman D.E. (1991) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Backbone resonance assignment of human eukaryotic translation initiation factor 4E (eIF4E) in complex with 7-methylguanosine diphosphate (m7GDP) and a 17-amino acid peptide derived from human eIF4GII. (PubMed id 12975586) 3, 4 Miura T.... Shimma N. (2003) Eukaryotic initiation factors 4A (eIF4A) and 4G (eIF4G) mutually interact in a 1:1 ratio in vivo. (PubMed id 11408474) 3, 4 Li W.... Proud C.G. (2001) A novel shuttling protein, 4E-T, mediates the nuclear import of the mRNA 5' cap-binding protein, eIF4E. (PubMed id 10856257) 3, 4 Dostie J.... Sonenberg N. (2000)
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Genome Databases showing EIF4E
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing EIF4E
(According to HUGE )
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--
Specialized Databases showing EIF4E (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for EIF4E (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for EIF4E:
Antibodies & Assays for EIF4E  
Search Tocris compounds for EIF4E
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Aliases for EIF4E
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Location for EIF4E
Medical News for EIF4E
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009