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Aliases for EGID-100533183 Gene

Aliases for EGID-100533183 Gene

  • ZNF664-RFLNA Readthrough 3
  • Filamin-Interacting Protein FAM101A 3
  • Regulator Of Filamin Protein A 3
  • ZNF664-FAM101A Readthrough 3
  • Protein FAM101A 3
  • ZNF664-RFLNA 3
  • Refilin-A 3
  • RefilinA 3
  • RFLNA 3

External Ids for EGID-100533183 Gene

Summaries for EGID-100533183 Gene

Entrez Gene Summary for EGID-100533183 Gene

  • This locus represents naturally occurring read-through transcription between the neighboring zinc finger protein 664 (Gene ID: 144348) and refilin A (Gene ID: 144347) genes on chromosome 12. The read-through transcript produces a protein that shares sequence identity with the downstream refilin A gene product. [provided by RefSeq, Dec 2016]

GeneCards Summary for EGID-100533183 Gene

EGID-100533183 (ZNF664-RFLNA Readthrough) is a Protein Coding gene. An important paralog of this gene is FAM101A.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for EGID-100533183 Gene

Genomics for EGID-100533183 Gene

Genomic Location for EGID-100533183 Gene

Chromosome:
12
Start:
123,973,215 bp from pter
End:
124,316,024 bp from pter
Size:
342,810 bases
Orientation:
Plus strand

Genomic View for EGID-100533183 Gene

Genes around EGID-100533183 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
EGID-100533183 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EGID-100533183 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for EGID-100533183 Gene

No data available for Regulatory Elements for EGID-100533183 Gene

Proteins for EGID-100533183 Gene

Post-translational modifications for EGID-100533183 Gene

No Post-translational modifications

Other Protein References for EGID-100533183 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for EGID-100533183 Gene

Domains & Families for EGID-100533183 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for EGID-100533183 Gene

Function for EGID-100533183 Gene

Gene Ontology (GO) - Molecular Function for EGID-100533183 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
GO:0031005 filamin binding IEA --
genes like me logo Genes that share ontologies with EGID-100533183: view
genes like me logo Genes that share phenotypes with EGID-100533183: view

Animal Models for EGID-100533183 Gene

MGI Knock Outs for EGID-100533183:

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , miRNA , Transcription Factor Targets and HOMER Transcription for EGID-100533183 Gene

Localization for EGID-100533183 Gene

Gene Ontology (GO) - Cellular Components for EGID-100533183 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IEA --
GO:0032432 actin filament bundle IEA --
genes like me logo Genes that share ontologies with EGID-100533183: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for EGID-100533183 Gene

Pathways & Interactions for EGID-100533183 Gene

SuperPathways for EGID-100533183 Gene

No Data Available

Interacting Proteins for EGID-100533183 Gene

Gene Ontology (GO) - Biological Process for EGID-100533183 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0048705 skeletal system morphogenesis IEA --
GO:0061182 negative regulation of chondrocyte development IEA --
GO:0061572 actin filament bundle organization IEA --
GO:1900158 negative regulation of bone mineralization involved in bone maturation IEA --
genes like me logo Genes that share ontologies with EGID-100533183: view

No data available for Pathways by source and SIGNOR curated interactions for EGID-100533183 Gene

Drugs & Compounds for EGID-100533183 Gene

No Compound Related Data Available

Transcripts for EGID-100533183 Gene

mRNA/cDNA for EGID-100533183 Gene

(2) REFSEQ mRNAs :

Alternative Splicing Database (ASD) splice patterns (SP) for EGID-100533183 Gene

No ASD Table

Relevant External Links for EGID-100533183 Gene

GeneLoc Exon Structure for
EGID-100533183

Expression for EGID-100533183 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for EGID-100533183 Gene

Orthologs for EGID-100533183 Gene

This gene was present in the common ancestor of mammals.

Orthologs for EGID-100533183 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FAM101A 34
  • 97.78 (n)
cow
(Bos Taurus)
Mammalia FAM101A 34
  • 88.64 (n)
dog
(Canis familiaris)
Mammalia FAM101A 34
  • 88.47 (n)
mouse
(Mus musculus)
Mammalia Fam101a 34
  • 80.74 (n)
Rflna 16
rat
(Rattus norvegicus)
Mammalia Fam101a 34
  • 78.52 (n)
Species where no ortholog for EGID-100533183 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

No data available for Evolution for EGID-100533183 Gene

Paralogs for EGID-100533183 Gene

Paralogs for EGID-100533183 Gene

genes like me logo Genes that share paralogs with EGID-100533183: view

Variants for EGID-100533183 Gene

Sequence variations from dbSNP and Humsavar for EGID-100533183 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs1000004416 -- 124,234,471(+) GCTTG(A/C)CAAAT intron-variant
rs1000005912 -- 123,978,645(+) GGACA(C/G)TAGAT intron-variant
rs1000016756 -- 124,300,329(+) TCCCT(A/G)AGGAA intron-variant
rs1000024420 -- 124,168,886(+) ATAGA(G/T)AATAA intron-variant
rs1000029404 -- 124,018,605(+) ATCCT(-/TG)TGTGC intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for EGID-100533183 Gene

Disorders for EGID-100533183 Gene

No disorders were found for EGID-100533183 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for EGID-100533183 Gene

Publications for EGID-100533183 Gene

  1. A meta-analysis of genome-wide association studies for adiponectin levels in East Asians identifies a novel locus near WDR11-FGFR2. (PMID: 24105470) Wu Y. … Tai E.S. (Hum. Mol. Genet. 2014) 3 64
  2. Genome-wide association study identifies new disease loci for isolated clubfoot. (PMID: 24667120) Zhang T.X. … Gurnett C.A. (J. Med. Genet. 2014) 3 64
  3. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3 64
  4. Preliminary evidence of genetic determinants of adiponectin response to fenofibrate in the Genetics of Lipid Lowering Drugs and Diet Network. (PMID: 23149075) Aslibekyan S. … Arnett D.K. (Nutr Metab Cardiovasc Dis 2013) 3 64
  5. Discovery and refinement of loci associated with lipid levels. (PMID: 24097068) . … Abecasis G.R. (Nat. Genet. 2013) 3 64

Products for EGID-100533183 Gene

Sources for EGID-100533183 Gene

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