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Aliases for EGFLAM-AS1 Gene

Subcategory (RNA class) for EGFLAM-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for EGFLAM-AS1 Gene

  • EGFLAM Antisense RNA 1 2 3 5
  • EGFLAM Antisense RNA 1 (Non-Protein Coding) 2 3
  • LncRNA Low Expressed In Gastric Cancer 2 3
  • LncRNA-LOWEG 3

External Ids for EGFLAM-AS1 Gene

Previous GeneCards Identifiers for EGFLAM-AS1 Gene

  • GC00U933924

Summaries for EGFLAM-AS1 Gene

GeneCards Summary for EGFLAM-AS1 Gene

EGFLAM-AS1 (EGFLAM Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for EGFLAM-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for EGFLAM-AS1 Gene

Genomics for EGFLAM-AS1 Gene

Regulatory Elements for EGFLAM-AS1 Gene

Enhancers for EGFLAM-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05H038462 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.8 -39.3 -39306 8 ATF1 FOXA2 SIN3A FEZF1 BRCA1 ATF7 FOS DEK TSHZ1 PPARG EGFLAM ENSG00000248234 EGFLAM-AS1 EGFLAM-AS2 LOC105374732
GH05H038806 1.6 Ensembl ENCODE dbSUPER 11.2 -381.3 -381286 4 PKNOX1 FEZF1 ZNF2 CBX5 ZNF302 ZNF143 ZNF548 FOS DEK SP3 LIFR-AS1 RICTOR ENSG00000248234 EGFLAM-AS1 EGFLAM-AS2 EGFLAM LINC02110 LOC105374733 ENSG00000250629
GH05H038659 1.3 FANTOM5 ENCODE 10.6 -233.0 -232965 1 HDAC1 TBP ATF1 NFRKB GLI4 ZBTB40 YY1 ZNF766 ELK1 ZNF366 EGFLAM-AS1 ENSG00000248234 LIFR ENSG00000251189
GH05H038555 1 ENCODE 10.6 -129.5 -129459 2 ARID4B SIN3A DMAP1 GLI4 ZNF2 YY1 ZNF766 GLIS2 ELK1 KLF7 LIFR LOC105374732 EGFLAM-AS1 ENSG00000248234 EGFLAM-AS2 EGFLAM LIFR-AS1 MIR3650
GH05H038453 0.8 ENCODE 11.2 -26.3 -26338 0 TBL1XR1 BACH1 EBF1 RELA POLR2A EED ATF7 ETV6 RUNX3 IKZF2 ENSG00000248234 EGFLAM-AS1 LOC105374732
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around EGFLAM-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for EGFLAM-AS1 Gene

Chromosome:
5
Start:
38,425,036 bp from pter
End:
38,427,376 bp from pter
Size:
2,341 bases
Orientation:
Minus strand

Genomic View for EGFLAM-AS1 Gene

Genes around EGFLAM-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
EGFLAM-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EGFLAM-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for EGFLAM-AS1 Gene

Proteins for EGFLAM-AS1 Gene

Post-translational modifications for EGFLAM-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for EGFLAM-AS1 Gene

Domains & Families for EGFLAM-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for EGFLAM-AS1 Gene

Function for EGFLAM-AS1 Gene

Phenotypes From GWAS Catalog for EGFLAM-AS1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for EGFLAM-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for EGFLAM-AS1 Gene

Localization for EGFLAM-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for EGFLAM-AS1 Gene

Pathways & Interactions for EGFLAM-AS1 Gene

SuperPathways for EGFLAM-AS1 Gene

No Data Available

Interacting Proteins for EGFLAM-AS1 Gene

Gene Ontology (GO) - Biological Process for EGFLAM-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for EGFLAM-AS1 Gene

Drugs & Compounds for EGFLAM-AS1 Gene

No Compound Related Data Available

Transcripts for EGFLAM-AS1 Gene

mRNA/cDNA for EGFLAM-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for EGFLAM-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for EGFLAM-AS1 Gene

No ASD Table

Relevant External Links for EGFLAM-AS1 Gene

GeneLoc Exon Structure for
EGFLAM-AS1
ECgene alternative splicing isoforms for
EGFLAM-AS1

Expression for EGFLAM-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for EGFLAM-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for EGFLAM-AS1 Gene

This gene is overexpressed in Heart - Left Ventricle (x7.3), Ovary (x5.3), and Muscle - Skeletal (x4.6).
genes like me logo Genes that share expression patterns with EGFLAM-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for EGFLAM-AS1 Gene

Orthologs for EGFLAM-AS1 Gene

Evolution for EGFLAM-AS1 Gene

ENSEMBL:
Gene Tree for EGFLAM-AS1 (if available)
TreeFam:
Gene Tree for EGFLAM-AS1 (if available)

No data available for Orthologs for EGFLAM-AS1 Gene

Paralogs for EGFLAM-AS1 Gene

No data available for Paralogs for EGFLAM-AS1 Gene

Variants for EGFLAM-AS1 Gene

Relevant External Links for EGFLAM-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
EGFLAM-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for EGFLAM-AS1 Gene

Disorders for EGFLAM-AS1 Gene

No disorders were found for EGFLAM-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for EGFLAM-AS1 Gene

Publications for EGFLAM-AS1 Gene

  1. A novel long noncoding RNA-LOWEG is low expressed in gastric cancer and acts as a tumor suppressor by inhibiting cell invasion. (PMID: 26537802) Zhao JH … Wang ZN (Journal of cancer research and clinical oncology 2016) 2 3 60
  2. Distinct class of putative "non-conserved" promoters in humans: comparative studies of alternative promoters of human and mouse genes. (PMID: 17567985) Tsuritani K … Suzuki Y (Genome research 2007) 3 60

Products for EGFLAM-AS1 Gene

Sources for EGFLAM-AS1 Gene

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