EGF Gene
protein-coding GIFtS : 73
GCID: GC04 P110834
epidermal growth factor (Previous name: epidermal growth factor (beta-urogastrone) )
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Aliasesfor EGF gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Epidermal Growth Factor 1 2 HOMG42 5 URG2 5 Epidermal Growth Factor (Beta-Urogastrone)1 Beta-Urogastrone1 Pro-Epidermal Growth Factor2
Export aliases for EGF gene to outside databases Previous GC identifers: GC04P111240 GC04P111104 GC04P111292 GC04P111191 GC04P106566
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Summariesfor EGF gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for EGF : This gene encodes a member of the epidermal growth factor superfamily. The encoded protein is synthesized as a large precursor molecule that is proteolytically cleaved to generate the 53-amino acid epidermal growth factor peptide. This protein acts a potent mitogenic factor that plays an important role in the growth, proliferation and differentiation of numerous cell types. This protein acts by binding the high affinity cell surface receptor, epidermal growth factor receptor. Defects in this gene are the cause of hypomagnesemia type 4. Dysregulation of this gene has been associated with the growth and progression of certain cancers. Alternate splicing results in multiple transcript variants.(provided by RefSeq, May 2010) UniProtKB/Swiss-Prot: EGF_HUMAN, P01133 Function : EGF stimulates the growth of various epidermal and epithelial tissues in vivo and in vitro and of somefibroblasts in cell culture. Magnesiotropic hormone that stimulates magnesium reabsorption in the renal distal convoluted tubule via engagement of EGFR and activation of the magnesium channel TRPM6 summary
for EGF : The epidermal growth factor receptor (EGFR) is a receptor tyrosine kinase of the ErbB family. Four membersof the ErbB family have been identified; EGFR (ErbB1, HER1), ErbB2 (HER2), ErbB3 (HER3) and ErbB4 (HER4).EGFR signaling is initiated by ligand binding to the extracellular ligand binding domain. This initiatesreceptor homo-/hetero-dimerization and autophosphorylation by the intracellular kinase domain, resulting inreceptor activation. Following activation, phosphorylation of cytoplasmic substrates occurs and a signalingcascade is initiated that drives many cellular responses, including changes in gene expression, cytoskeletalrearrangement, anti-apoptosis and increased cell proliferation. Gene Wiki entry for EGF (Epidermal growth factor)
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genomic Viewsfor EGF gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000004.11 NC_018915.1 NT_016354.19 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the EGF gene promoter: STAT5B STAT1 AP-1 ATF-2 STAT5A CREB deltaCREB c-Jun Other transcription factors Search SABiosciences Chromatin IP Primers for EGF Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat EGF
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 4q25 Ensembl cytogenetic band: 4q25 HGNC cytogenetic band: 4q25 EGF Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 4 GeneLoc Exon Structure
GeneLoc location for GC04P110834: view genomic region
(about GC identifiers )
Start:
110,834,040 bp from pter
End:
110,934,118 bp from pter
Size:
100,079 bases
Orientation:
plus strand
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Proteinsfor EGF gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: EGF_HUMAN, P01133 (See
protein sequence )Recommended Name: Pro-epidermal growth factor precursor Size : 1207 amino acids; 133994 Da
Subunit : Interacts with EGFR and promotes EGFR dimerization. Interacts with RHBDF2 (By similarity). Interacts withRHBDF1; may retain EGF in the endoplasmic reticulum and regulates its degradation through the endoplasmic reticulum-associated degradation (ERAD)
Subcellular location : Membrane; Single-pass type I membrane protein
Sequence caution : Sequence=AAR84237.1; Type=Erroneous gene model prediction;
6 PDB 3D structures from and Proteopedia for EGF :1IVO (3D)
  1JL9 (3D)
  1NQL (3D)
  1P9J (3D)
  2KV4 (3D)
  3NJP (3D)
 
Secondary accessions : B4DRK7 E9PBF0 Q52LZ6Alternative splicing : 2 isoforms : P01133-1 P01133-2 Explore the universe of human proteins at neXtProt for EGF: NX_P01133 Post-translational modifications:
O-glycosylated with core 1-like and core 2-like glycans. It is uncertain if Ser-954 or Thr-955 is O-glycosylated. The modification here shows glycan heterogeneity: HexHexNAc (major) and Hex2HexNAc2 (minor)1
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P01133 EGF Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (3 alternative transcripts):
NP_001171601.1 NP_001171602.1 NP_001954.2 ENSEMBL proteins: ENSP00000424316 ENSP00000265171 ENSP00000421384 Reactome Protein details: P01133 Human Recombinant Protein Products: EMD Millipore Purified and/or Recombinant EGF Protein R&D Systems Recombinant & Natural Proteins for EGF Enzo Life Sciences proteins for EGF OriGene Purified Protein: EGF OriGene Protein Over-expression Lysate: EGF OriGene Custom Protein Services for EGF GenScript Purified and Recombinant Proteins for EGF Novus Biologicals EGF Proteins Novus Biologicals EGF Lysate Sino Biological Recombinant Protein for EGF ProSpec Recombinant Protein for EGF Uscn Proteins for EGF
Gene Ontology (GO): 5/6 cellular component terms (GO ID links to tree view) (see all 6 ): About this table
EGF for ontologies About GeneDecksing EGF Antibody Products: Assay Products for EGF:
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Protein
Domains / Familiesfor EGF gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
EGF for domains About GeneDecksing 5/9 InterPro domains/families (see all 9 ):
Graphical View of Domain Structure for InterPro Entry P01133 ProtoNet protein and cluster: P01133
4 Blocks protein families : IPB000033 Low-density lipoprotein receptor IPB000152 Aspartic acid and asparagine hydroxylation site IPB001336 Type I EGF signature IPB001881 EGF-like calcium-binding UniProtKB/Swiss-Prot: EGF_HUMAN, P01133 Similarity : Contains 9 EGF-like domainsSimilarity : Contains 9 LDL-receptor class B repeats
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Functionfor EGF gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: EGF_HUMAN, P01133 Function : EGF stimulates the growth of various epidermal and epithelial tissues in vivo and in vitro and of somefibroblasts in cell culture. Magnesiotropic hormone that stimulates magnesium reabsorption in the renal distal convoluted tubule via engagement of EGFR and activation of the magnesium channel TRPM6
Genatlas biochemistry entry for EGF : epidermal growth factor,6kDa,synthesized as a large preprotein,EGF membrane glycoprotein also containing nine EGF repeats and urogastrone Summary: During embryonic development, EGF as signaling molecule affects the following cells: Column Cytotrophoblast Cells in Column Cytotrophoblast Layer , Late Retinal Progenitor Cells in Neuroblastic Layer (see all 4 ). EGF as growth factor is involved in stem cell differentiation protocols towards the
derivation of the following cells: Hepatocyte-like cells , Nkx2-1 induced endoderm (see all 17 ). Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for EGF (see all 6 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for EGF (see all 3 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: EGF (NM_001945 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for EGF Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat EGF
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for EGF
Gene Ontology (GO): 5 molecular function terms (GO ID links to tree view) : About this table
EGF for ontologies About GeneDecksing 2 GenomeRNAi human phenotypes for EGF :Animal Models: Mouse knock-out Egf tm1Dle for EGF 8 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Egf) :
EGF for phenotypes About GeneDecksing
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Pathways & Interactionsfor EGF gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/75 super-pathways (see all 75 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Apoptotic Pathways in Synovial Fibroblasts 2 Signaling by FGFR 3 PIP3 activates AKT signaling 4 GPCR Pathway 5 TGF-Beta Pathway
Pathway sources See GeneCards unified pathways Show all pathways 5/13 EMD Millipore Pathways for EGF (see all 13 )5/67 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for EGF (see all 67 )1
Cell Signaling Technology (CST) Pathway for EGF 5/14 GeneGo (Thomson Reuters) Pathways for EGF (see all 14 )5/24 BioSystems Pathways for EGF (see all 24 ) 5/41
Reactome Pathways for EGF (see all 41 )1 PharmGKB Pathway for EGF 5/16
Kegg Pathways (Kegg details for EGF) (see all 16 ):
EGF for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for EGF STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/154 Interacting proteins for EGF (P01133 1 , 2 , 3 ENSP00000265171 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 154 )About this table Gene Ontology (GO): 5/34 biological process terms (GO ID links to tree view) (see all 34 ): About this table
EGF for ontologies About GeneDecksing
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Drugs & Compoundsfor EGF gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
EGF for compounds About GeneDecksing
Enzo Life Sciences drugs & compounds for EGF
Compounds for EGF available from Tocris Bioscience About this table 2 HMDB Compounds for EGF About this table 2 DrugBank Compounds for EGF About this table 10/133 Novoseek chemical compound relationships for EGF gene (see all 133 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
tyrosine
89.9
1884
1689318 (6), 14642088 (6), 1801683 (6), 11459228 (5) (see all 99 )
ag 1478
89.1
95
10579343 (2), 12580917 (2), 12141529 (2), 10766877 (2) (see all 77 )
pd153035
81.2
16
9815602 (2), 11169460 (2), 11792073 (1), 19423651 (1) (see all 14 )
gefitinib
78.8
158
15083203 (6), 17311025 (4), 18691415 (4), 19380191 (4) (see all 74 )
thymidine
74.8
290
7507605 (6), 1311246 (4), 8687119 (3), 8319182 (3) (see all 99 )
cetuximab
74.6
79
18691415 (5), 19380191 (4), 17707800 (3), 12850474 (2) (see all 51 )
phosphatidylinositol
73.6
219
7515147 (5), 9886492 (4), 10801833 (4), 16728406 (3) (see all 99 )
phosphotyrosine
73.3
57
10634619 (2), 1693615 (1), 7661200 (1), 8081876 (1) (see all 48 )
pd 98,059
70.1
84
11277615 (2), 17107667 (2), 10395291 (2), 17283879 (2) (see all 63 )
vegf
69.9
648
15690202 (10), 12667326 (7), 15250102 (7), 9626350 (5) (see all 99 )
1 PharmGKB related drug/compound annotation for EGF gene
Drug/compound
PharmGKB Annotation cetuximab CA  
About this table Search CenterWatch for drugs/clinical trials and news about EGF
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Transcriptsfor EGF gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for EGF gene (3 alternative transcripts): NM_001178130.1 NM_001178131.1 NM_001963.4 Unigene Cluster for EGF:
Epidermal growth factor Hs.419815 [show with all ESTs ] Unigene Representative Sequence: NM_001963 12 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000509793 ENST00000265171 (uc003hzy.4 uc011cfu.2 uc011cfv.2 uc010imk.3 )ENST00000503392 ENST00000502723 ENST00000504633 ENST00000502579 ENST00000541061 ENST00000511228 ENST00000509996 ENST00000544918 ENST00000537316 ENST00000540840 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for EGF (see all 6 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for EGF (see all 3 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: EGF (NM_001945 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for EGF Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat EGF
Additional cDNA sequence: AK299306.1 AK307734.1 AY548762.1 BC093731.1 BC113461.1 BC143357.1 JQ346088.1 X04571.1
8 DOTS entries : DT.303224 DT.95252684
DT.100018040 DT.100751605 DT.91987341 DT.92032313 DT.95158066 DT.92051525 24/65 AceView cDNA sequences (see all 65 ):
AY548762 AA954947 AI381567 AW772286 BE501422 AU129376 BG427221 BF104993 BM090637 BG459974 BG460186 BG460092 BX280823 NM_001963 BX485552 BM090870 AI651044 AW300103 BG461255 BQ010822 CD679255 X04571 BG459705 BG460854 GeneLoc Exon Structure
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Expression for EGF gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section EGF expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: GAGGCAGGAG
About this image EGF expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See EGF Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for EGF SOURCE GeneReport for Unigene cluster: Hs.419815 UniProtKB/Swiss-Prot: EGF_HUMAN, P01133 Tissue specificity : Expressed in kidney, salivary gland, cerebrum and prostate SABiosciences Expression via Pathway-Focused PCR Arrays including EGF (see all 14 ): Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for EGFBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat EGF QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat EGF QIAGEN QuantiFast Probe-based Assays in human , mouse , rat EGF In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for EGF
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Orthologsfor EGF gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for EGF gene from 5/15 species (see all 15 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
chicken (Gallus gallus)
Aves
EGF1
epidermal growth factor
65.36(n) 55.25(a)
 
408035 NM_001001292.1 NP_001001292.1
lizard (Anolis carolinensis)
Reptilia
EGF6
--
47(a)
1 ↔ 1
5(144304260-144337195)
zebrafish (Danio rerio)
Actinopterygii
Dr.271302
Danio rerio epidermal growth factor precursor (egf) mRNA, complete cds less
76.93(n)
 
AY332224.1
honey bee (Apis mellifera)
Insecta
--
--
5(a)
1 ↔ 1
Group9.2(367282-376566)
worm (Caenorhabditis elegans)
Secernentea
F14B4.16
--
18(a)
1 ↔ 1
I(9265944-9270912)
ENSEMBL Gene Tree for EGF (if available)TreeFam Gene Tree for EGF (if available)
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Paralogsfor EGF gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for EGF gene LRP5 2 LRP6 2 LRP2 2 SORL1 2 LRP1B 2 LDLR 2 LRP5L 2 LRP4 2 VLDLR 2 NID2 2 NID1 2 LRP8 2 LRP1 2 12 SIMAP similar genes for EGF using alignment to 4 protein entries: EGF_HUMAN (see all proteins ):NRG2 EPGN PAMR1 LDLR LRP1B TGFA AREG LRP5L NPNT SNED1 DKFZp667O055 NRG4
EGF for paralogs About GeneDecksing
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genomic Variantsfor EGF gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 5 variations for EGF 3 CNVs : 92300 63926 6305 2 Indels : 59161 98842 Human Gene Mutation Database (HGMD) : EGF SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing EGF
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Disorders
/ Diseasesfor EGF gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
EGF for disorders About GeneDecksing OMIM gene information: 131530 OMIM disorders : 611718 UniProtKB/Swiss-Prot: EGF_HUMAN, P01133
Defects in EGF are the cause of hypomagnesemia type 4 (HOMG4) [MIM:611718]; also known as renal hypomagnesemia normocalciuric. HOMG4 is a disorder characterized by massive renal hypomagnesemia and normal levels of serum calcium and calcium excretion. Clinical features include seizures, mild-to mederate psychomotor retardation, and brisk tendon reflexes 20/282 diseases for EGF (see all 282 ): About MalaCards hypomagnesemia acid-labile subunit factor vii deficiency contractural arachnodactyly perinatal necrotizing enterocolitis microvillus inclusion disease estrogen-receptor negative breast cancer zollinger-ellison syndrome bronchiolo-alveolar adenocarcinoma malignant peripheral nerve sheath tumor congenital contractural arachnodactyly middle ear cholesteatoma squamous cell carcinoma atrioventricular septal defect age related macular degeneration xanthogranulomatous pyelonephritis graft versus host disease non-small cell lung carcinoma sweat gland carcinoma glanzmann's thrombasthenia 20/21 diseases from the University of Copenhagen DISEASES database for EGF (see all 21 ):Carcinoma Breast cancer Cholera Malignant glioma Lung cancer Prostate cancer Gastrointestinal system disease Colorectal cancer Pancreatic cancer Diphtheria Vascular disease Ovarian cancer Kidney disease Hepatocellular carcinoma Polycystic kidney disease Urinary bladder cancer Eye disease Meningioma Endometrial cancer Psoriasis 10/97 Novoseek disease relationships for EGF gene (see all 97 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
tumors
73.5
1513
2364377 (7), 2380332 (7), 1709063 (7), 2155590 (6) (see all 99 )
breast cancer
69.4
539
17940864 (6), 7749149 (4), 2032259 (4), 10554021 (4) (see all 99 )
carcinoma squamous cell
69.1
272
8137238 (3), 2346491 (3), 8638090 (3), 7529189 (3) (see all 99 )
cancer
64.3
494
7697894 (5), 2038286 (5), 1473218 (4), 16815674 (3) (see all 99 )
carcinoma
60.5
255
11288982 (3), 8321742 (3), 1528299 (3), 15958574 (3) (see all 99 )
glioma
58.9
211
10595738 (7), 19634110 (5), 17219981 (4), 12825816 (4) (see all 94 )
breast cysts
58.3
33
2249889 (3), 2141515 (3), 12779078 (2), 8368433 (2) (see all 17 )
pancreatic cancer
57.6
110
10360220 (7), 16340751 (4), 10050105 (4), 9816541 (4) (see all 57 )
glioblastoma
56.7
56
19148517 (3), 17575160 (2), 9440140 (2), 7714611 (2) (see all 33 )
prostate cancer
55.9
226
18511414 (4), 9892211 (4), 19356736 (4), 2330326 (3) (see all 99 )
Genetic Association Database (GAD): EGF Human Genome Epidemiology (HuGE) Navigator: EGF (130 documents) Tumor Gene Database (TGDB) : EGF Export disorders for EGF gene to outside databases
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Publicationsfor EGF gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for EGF gene, integrated from 9 sources (see all 5600 ): (articles sorted by number of sources associating them with EGF) Utopia : connect your pdf to the dynamic world of online information
No association between EGF gene polymorphism and gastric cancer. (PubMed id 16214932) 1 , 4, 9 Goto Y....Hamajima N. (2005) A single nucleotide polymorphism in the 5' untranslated region of the EGF gene is associated with occurrence and malignant progression of gastric cancer. (PubMed id 15860930) 1 , 4, 9 Hamai Y....Yasui W. (2005) Epidermal growth factor gene polymorphism is different between schizophrenia and lung cancer patients in Korean population. (PubMed id 15663953) 1 , 4, 9 Lim Y.J....Park Y.H. (2005) A study of five human cytokine genes in human essential hypertension. (PubMed id 12009575) 1 , 4, 9 Frossard P.M....Lukic M.L. (2002) EGF activates its receptor by removing interactions that autoinhibit ectodomain dimerization. (PubMed id 12620237) 1 , 2 , 9 Ferguson K.M....Lemmon M.A. (2003) The NMR solution structure of human epidermal growth factor (hEGF) at physiological pH and its interactions with suramin. (PubMed id 21029725) 1 , 2 Huang H.W....Yu C. (2010) Epidermal growth factor a61g polymorphism is associated with the age of onset of schizophrenia in male patients. (PubMed id 16115648) 1 , 4 Hanninen K....Lehtimaki T. (2007) No association of EGF polymorphism with schizophrenia in a Japanese population. (PubMed id 15729146) 1 , 4 Watanabe Y....Someya T. (2005) Epidermal growth factor A61G polymorphism and cardiac autonomic control in adults. (PubMed id 15913871) 1 , 4 Puttonen S....Lehtimaki T. (2005) Single nucleotide polymorphisms associated with aggressive periodontitis and severe chronic periodontitis in Japanese. (PubMed id 15081423) 1 , 4 Suzuki A....Kamoi K. (2004)
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
External Searches for EGF gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genome Databases showing EGF gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Other Databases showing EGF gene
(According to HUGE )
About This Section --
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Specialized Databases showing EGF gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for EGF Pharmacogenomics, SNPs, Pathways ATLAS Chromosomes in Cancer entry for EGF Genetics and Cytogenetics in Oncology and Haematology NIEHS-SNPs http://egp.gs.washington.edu/data/egf/ Wikipedia http://en.wikipedia.org/wiki/Epidermal_growth_factor
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
About This Section Patent Information for EGF gene: Search GeneIP for patents involving EGF GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Productsfor EGF gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for EGF OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for EGF OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for EGF OriGene Protein Over-expression Lysate for EGF Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for EGF OriGene 3'-UTR Clone for EGF OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for EGF OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for EGF Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for EGF OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for EGF OriGene Custom Protein Services for EGF OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat EGF QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing EGF QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat EGF QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat EGF QIAGEN QuantiFast Probe-based Assays in human , mouse , rat EGF QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat EGF
Antibodies & Assays for EGF  
Tocris compounds for EGF
Recombinant Protein for EGF
EGF Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for EGF
ThermoFisher Antibody for EGF
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat EGF
Jump to Section...
Aliases for EGF
Databases for EGF
Disorders / Diseases for EGF
Domains / Families for EGF
Drugs / Compounds for EGF
Expression for EGF
Function for EGF
Genomic Views for EGF
Intellectual Property for EGF
Orthologs for EGF
Paralogs for EGF
Pathways / Interactions for EGF
Products for EGF
Proteins for EGF
Publications for EGF
Search Box for EGF
Summaries for EGF
Transcripts for EGF
Variants for EGF
TOP
BOTTOM