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Aliases for EFTUD1P1 Gene

Aliases for EFTUD1P1 Gene

  • Elongation Factor Tu GTP Binding Domain Containing 1 Pseudogene 1 2 3 5
  • Family With Sequence Similarity 42, Member B 2 3
  • Elongation Factor Tu GTP-Binding Domain-Containing Protein 1 Pseudogene 3
  • Similar To Hypothetical Protein FLJ13119 2
  • HsT19321 3
  • FAM42B 3

External Ids for EFTUD1P1 Gene

Previous HGNC Symbols for EFTUD1P1 Gene

  • FAM42B

Previous GeneCards Identifiers for EFTUD1P1 Gene

  • GC15P084750

Summaries for EFTUD1P1 Gene

GeneCards Summary for EFTUD1P1 Gene

EFTUD1P1 (Elongation Factor Tu GTP Binding Domain Containing 1 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for EFTUD1P1 Gene

Genomics for EFTUD1P1 Gene

Regulatory Elements for EFTUD1P1 Gene

Enhancers for EFTUD1P1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around EFTUD1P1 on UCSC Golden Path with GeneCards custom track

Promoters for EFTUD1P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around EFTUD1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for EFTUD1P1 Gene

Chromosome:
15
Start:
84,080,168 bp from pter
End:
84,126,604 bp from pter
Size:
46,437 bases
Orientation:
Plus strand

Genomic View for EFTUD1P1 Gene

Genes around EFTUD1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
EFTUD1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EFTUD1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for EFTUD1P1 Gene

Proteins for EFTUD1P1 Gene

Post-translational modifications for EFTUD1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for EFTUD1P1 Gene

Domains & Families for EFTUD1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for EFTUD1P1 Gene

Function for EFTUD1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for EFTUD1P1 Gene

Localization for EFTUD1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for EFTUD1P1 Gene

Pathways & Interactions for EFTUD1P1 Gene

SuperPathways for EFTUD1P1 Gene

No Data Available

Interacting Proteins for EFTUD1P1 Gene

Gene Ontology (GO) - Biological Process for EFTUD1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for EFTUD1P1 Gene

Drugs & Compounds for EFTUD1P1 Gene

No Compound Related Data Available

Transcripts for EFTUD1P1 Gene

mRNA/cDNA for EFTUD1P1 Gene

(1) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for EFTUD1P1 Gene

Elongation factor Tu GTP binding domain containing 1 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for EFTUD1P1 Gene

No ASD Table

Relevant External Links for EFTUD1P1 Gene

GeneLoc Exon Structure for
EFTUD1P1
ECgene alternative splicing isoforms for
EFTUD1P1

Expression for EFTUD1P1 Gene

mRNA expression in normal human tissues for EFTUD1P1 Gene

mRNA differential expression in normal tissues according to GTEx for EFTUD1P1 Gene

This gene is overexpressed in Testis (x6.6).

SOURCE GeneReport for Unigene cluster for EFTUD1P1 Gene Hs.585157

genes like me logo Genes that share expression patterns with EFTUD1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for EFTUD1P1 Gene

Orthologs for EFTUD1P1 Gene

Evolution for EFTUD1P1 Gene

ENSEMBL:
Gene Tree for EFTUD1P1 (if available)
TreeFam:
Gene Tree for EFTUD1P1 (if available)

No data available for Orthologs for EFTUD1P1 Gene

Paralogs for EFTUD1P1 Gene

No data available for Paralogs for EFTUD1P1 Gene

Variants for EFTUD1P1 Gene

Sequence variations from dbSNP and Humsavar for EFTUD1P1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs5814175 -- 84,083,661(+) CAGAG(-/A)AAAAA intron-variant
rs11856738 -- 84,093,863(+) AACTT(C/T)TGAAG intron-variant
rs12050551 -- 84,094,533(+) ACCCT(A/G)TGGGA intron-variant
rs868131 -- 84,082,122(-) TATTT(C/G)ACATG intron-variant
rs6603020 -- 84,115,810(+) CTGTC(A/G)AATTT intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for EFTUD1P1 Gene

Disorders for EFTUD1P1 Gene

Relevant External Links for EFTUD1P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
EFTUD1P1

No disorders were found for EFTUD1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for EFTUD1P1 Gene

Publications for EFTUD1P1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 67

Products for EFTUD1P1 Gene

Sources for EFTUD1P1 Gene

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