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Aliases for EFTUD1P1 Gene

Aliases for EFTUD1P1 Gene

  • Elongation Factor Tu GTP Binding Domain Containing 1 Pseudogene 1 2 3 5
  • Family With Sequence Similarity 42, Member B 2 3
  • Elongation Factor Tu GTP-Binding Domain-Containing Protein 1 Pseudogene 3
  • Similar To Hypothetical Protein FLJ13119 2
  • HsT19321 3
  • FAM42B 3

External Ids for EFTUD1P1 Gene

Previous HGNC Symbols for EFTUD1P1 Gene

  • FAM42B

Previous GeneCards Identifiers for EFTUD1P1 Gene

  • GC15P084750

Summaries for EFTUD1P1 Gene

GeneCards Summary for EFTUD1P1 Gene

EFTUD1P1 (Elongation Factor Tu GTP Binding Domain Containing 1 Pseudogene 1) is a Pseudogene.

Additional gene information for EFTUD1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for EFTUD1P1 Gene

Genomics for EFTUD1P1 Gene

Regulatory Elements for EFTUD1P1 Gene

Enhancers for EFTUD1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15H084080 0.8 ENCODE 0.7 +0.0 6 0.2 ZSCAN5A PKNOX1 MXI1 BMI1 POLR2A SCRT2 ZNF600 PRDM10 KLF8 ZBTB20 GOLGA6L4 GC15M084077 EFTUD1P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around EFTUD1P1 on UCSC Golden Path with GeneCards custom track

Promoters for EFTUD1P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000080363 -67 1000 PKNOX1 ZNF76 BMI1 ZNF366 SCRT2 USF2 ZNF843 ZNF585B MYNN ZNF524

Genomic Locations for EFTUD1P1 Gene

Genomic Locations for EFTUD1P1 Gene
46,437 bases
Plus strand

Genomic View for EFTUD1P1 Gene

Genes around EFTUD1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
EFTUD1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EFTUD1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for EFTUD1P1 Gene

Proteins for EFTUD1P1 Gene

Post-translational modifications for EFTUD1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for EFTUD1P1 Gene

Domains & Families for EFTUD1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for EFTUD1P1 Gene

Function for EFTUD1P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for EFTUD1P1 Gene

Localization for EFTUD1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for EFTUD1P1 Gene

Pathways & Interactions for EFTUD1P1 Gene

SuperPathways for EFTUD1P1 Gene

No Data Available

Interacting Proteins for EFTUD1P1 Gene

Gene Ontology (GO) - Biological Process for EFTUD1P1 Gene


No data available for Pathways by source and SIGNOR curated interactions for EFTUD1P1 Gene

Drugs & Compounds for EFTUD1P1 Gene

No Compound Related Data Available

Transcripts for EFTUD1P1 Gene

mRNA/cDNA for EFTUD1P1 Gene

(1) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for EFTUD1P1 Gene

Elongation factor Tu GTP binding domain containing 1 pseudogene 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for EFTUD1P1 Gene

No ASD Table

Relevant External Links for EFTUD1P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for EFTUD1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for EFTUD1P1 Gene

mRNA differential expression in normal tissues according to GTEx for EFTUD1P1 Gene

This gene is overexpressed in Testis (x6.6).

NURSA nuclear receptor signaling pathways regulating expression of EFTUD1P1 Gene:


SOURCE GeneReport for Unigene cluster for EFTUD1P1 Gene:

genes like me logo Genes that share expression patterns with EFTUD1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for EFTUD1P1 Gene

Orthologs for EFTUD1P1 Gene

Evolution for EFTUD1P1 Gene

Gene Tree for EFTUD1P1 (if available)
Gene Tree for EFTUD1P1 (if available)

No data available for Orthologs for EFTUD1P1 Gene

Paralogs for EFTUD1P1 Gene

No data available for Paralogs for EFTUD1P1 Gene

Variants for EFTUD1P1 Gene

Sequence variations from dbSNP and Humsavar for EFTUD1P1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1000118619 -- 84,092,300(+) TCTCG(A/T)ACTCC intron-variant
rs1000296567 -- 84,123,190(+) TCTCC(A/T)TAGTG intron-variant
rs1000402687 -- 84,122,603(+) ATTTA(C/G)CAAGA intron-variant
rs1000646378 -- 84,118,217(+) GATTC(A/G)GCACC intron-variant
rs1000712519 -- 84,117,038(+) AATAA(A/G)TATTA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for EFTUD1P1 Gene

Variant ID Type Subtype PubMed ID
nsv977750 CNV duplication 23825009
nsv976960 CNV duplication 23825009
nsv974615 CNV duplication 23825009
nsv833075 CNV gain 17160897
nsv570284 CNV gain 21841781
nsv457220 CNV gain 19166990
nsv428310 CNV gain+loss 18775914
nsv1051788 CNV loss 25217958
esv3637086 CNV gain 21293372
esv33338 CNV gain 17666407
esv2760048 CNV gain+loss 17122850
dgv2638n100 CNV gain 25217958

Relevant External Links for EFTUD1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for EFTUD1P1 Gene

Disorders for EFTUD1P1 Gene

Relevant External Links for EFTUD1P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for EFTUD1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for EFTUD1P1 Gene

Publications for EFTUD1P1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 60

Products for EFTUD1P1 Gene

Sources for EFTUD1P1 Gene

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