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Aliases & Descriptions for EEF2
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| EEF-2 1, 2 | | EF-2 3 | | EF2 2, 3, 5 |
| | | Descriptions |
|---|
| eukaryotic translation elongation factor 2 2 | | polypeptidyl-tRNA translocase 2 |
|
| | Search outside databases for aliases for EEF2 genePrevious GC identifers: GC19M004066 GC19M003916 |
Summaries for EEF2(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for EEF2: This gene encodes a member of the GTP-binding translation elongation factor family. This protein is an essential factor for protein synthesis. It promotes the GTP-dependent translocation of the nascent protein chain from the A-site to the P-site of the ribosome. This protein is completely inactivated by EF-2 kinase phosporylation. [provided by RefSeq] UniProtKB/Swiss-Prot: EF2_HUMAN, P13639Function: This protein promotes the GTP-dependent translocation of the nascent protein chain from the A-site to the P-site of the ribosomeGene Wiki entry for EEF2 |
Genomic Location for EEF2
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the EEF2 gene 
Entrez Gene cytogenetic band: 19pter-q12 Ensembl cytogenetic band: 19p13.3 HGNC cytogenetic band: 19pter-q12EEF2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 19 GeneLoc Exon Structure GeneLoc location for GC19M003927:
(about GC identifiers)
Start:
|
3,927,054 bp from pter |
End:
|
3,936,461 bp from pter |
Size:
|
9,408 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000019.8 NT_011255.14
| Proteins for EEF2
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: EF2_HUMAN, P13639 (See
protein sequence)Recommended Name: Elongation factor 2 Size: 858 amino acids; 95338 Da
Subunit: Component of the mRNA surveillance SURF complex, at least composed of ERF1, ERF3 (ERF3A or ERF3B), EEF2, UPF1/RENT1, SMG1, SMG8 and SMG9
Subcellular location: Cytoplasm
Secondary accessions: Q58J86Post-translational modifications:
Phosphorylation by EF-2 kinase completely inactivates EF-21
Diphthamide is 2-[3-carboxyamido-3-(trimethyl-ammonio)propyl]histidine. Diphthamide can be ADP-ribosylated by diphtheria toxin and by Pseudomonas exotoxin A1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_001952.1
ENSEMBL proteins: ENSP00000307940
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
1 Gene Ontology (GO) cellular component term (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005737 | cytoplasm |
IEA | -- | About this table
Antibodies for EEF2: Assays for EEF2: | Protein
Domains/ Families for EEF2(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P13639
ProtoNet protein and cluster: P13639 2 Blocks protein families: IPB000640 Elongation factor G IPB005517 Elongation factor G
UniProtKB/Swiss-Prot: EF2_HUMAN, P13639Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily | Gene Function for EEF2
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001961
Applied Biosystems Silencer® siRNAs for EEF2
Sigma-Aldrich siRNA for EEF2  Sigma-Aldrich shRNA for EEF2  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001961                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001961                                  untagged cDNA clone in CMV expression vector: NM_001961 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001961
UniProtKB/Swiss-Prot: EF2_HUMAN, P13639Function: This protein promotes the GTP-dependent translocation of the nascent protein chain from the A-site to the P-site of the ribosomeGenatlas biochemistry entry for EEF2:eukaryotic translation elongation factor 25 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for EEF2
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
Gene Network CentralTM Interacting Genes and Proteins Network for EEF2 
5/252 Interacting proteins for EEF2 (ENSP000003079403 P136391, 2) via UniProtKB, MINT, and/or STRING (see all 252
)About this table
1 Gene Ontology (GO) biological process term (links to tree view): About this table
|
Drugs & Compounds for EEF2(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|  |
Enzo Life Sciences drugs & compounds for EEF2 |
Browse Tocris compounds for EEF2 10/29 Novoseek chemical compound relationships for EEF2 gene (see all 29
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| diphthamide |
89.10 |
16 |
1353910 (3), 15485916 (2), 1730643 (2), 14756556 (1) (see all 6) |
| apup |
88.69 |
1 |
7833807 (1) |
| exotoxin-a |
76.21 |
9 |
1353910 (1), 10861457 (1), 8692916 (1), 1719985 (1) (see all 5) |
| ricin |
67.42 |
6 |
1425176 (1), 7999776 (1), 8318952 (1), 8253723 (1) |
| nad+ |
53.89 |
6 |
8692916 (1), 8172890 (1), 14756556 (1), 16817779 (1) (see all 5) |
| gtp |
51.83 |
21 |
7805855 (4), 8617259 (3), 2318846 (2), 1511751 (1) (see all 11) |
| gdp |
49.26 |
8 |
7805855 (2), 8617259 (1), 9032056 (1), 1420308 (1) (see all 6) |
| glyceraldehyde 3-phosphate |
41.76 |
6 |
9398045 (1), 18161940 (1), 18762224 (1), 15660415 (1) (see all 6) |
| adp |
41.29 |
23 |
16142694 (5), 14756556 (3), 1353910 (2), 11037133 (2) (see all 10) |
| poly u |
30.49 |
2 |
2311763 (1) |
About this table
|
Transcripts for EEF2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001961
Sigma-Aldrich siRNA for EEF2  Sigma-Aldrich shRNA for EEF2  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001961 REFSEQ mRNAs for EEF2 gene: NM_001961.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001961               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001961                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001961                                  untagged cDNA clone in CMV expression vector: NM_001961  Additional cDNA sequence: AK297398.1 AK298498.1 AK299225.1 AY942181.1 BC006547.2 BC024689.1 BC126259.1 BC136313.1 CR596005.1 CR598660.1 CR602709.1 CR608809.1 CR616093.1 M19997.1 X51466.1 Z11692.1 24/63 DOTS entries (see all 63
): DT.95256406 DT.92466824 DT.92466830 DT.95256420 DT.452835 DT.91978289 DT.100041772 DT.100867128 DT.92047640 DT.92371227 DT.87016867 DT.100855407 DT.100658617 DT.75134632 DT.121430847 DT.92466819 DT.92466812 DT.121430864 DT.121430955 DT.92466810 DT.97864766 DT.91881089 DT.91986754 DT.92334137 24/1223 AceView cDNA sequences (see all 1223
):BM756524 AI458575 BG770149 BE733066 BU527472 BI754899 BP365468 AI816599 BM771580 BM841061 CD106615 BP353058 CR616093 BP871197 AA357426 BP356357 CN482704 CA434489 BE140740 CN483057 BF346066 BC024689 BM799812 BP357839
highest scoring ESTs for EEF2:AL527259 AU100434 AU117038 BE295332 BF527524 BF674019 BG031631 BG716091 BG826545 BM803346 Unigene Cluster for EEF2: Eukaryotic translation elongation factor 2 Hs.515070 [show with all ESTs]Unigene Representative Sequence: NM_001961
GeneLoc Exon Structure
5/9 Alternative Splicing Database (ASD) splice patterns (SP) for EEF2 (see all 9
)
| ExUns: | 1a | · | 1b | ^ | 2 | ^ | 3a | · | 3b | · | 3c | ^ | 4 | ^ | 5 | ^ | 6a | · | 6b | · | 6c | · | 6d | ^ | 7 | ^ | 8 | ^ | 9a | · | 9b | ^ | 10a | · | 10b | ^ | 11 | ^ | 12 | ^ | 13a | · | 13b | · | 13c | · | 13d | ^ | 14 | ^ | 15 | ^ | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | - |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | - |   | |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | - |   | |   | |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
| ExUns: | 16a | · | 16b | ^ | 17a | · | 17b | · | 17c | ^ | 18 | |
| SP1: | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for EEF2
1 Ensembl transcript including schematic representation: ENST00000309311
|
Expression for EEF2
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| EEF2 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for EEF2
1 / 2 / 3 6 probe-sets matching EEF2 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: AGCACCTCCA
SOURCE GeneReport for Unigene cluster: Hs.515070
Expression variation in blood from EXPOLDB for EEF2 |
Orthologs for EEF2
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for EEF2 gene from 5/25 species (see all 25
)
About this table Species with no ortholog for EEF2
ENSEMBL Gene Tree for EEF2 | Paralogs for EEF2(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for EEF2 gene
- ENSG000002052422 EFTUD12 EFTUD22
|
SNPs/Variants for EEF2(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for EEF2 (up to first 250kb)
|
Disorders & Mutations for EEF2
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 130610
9 Novoseek disease relationships for EEF2 gene
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| diphtheria |
84.36 |
39 |
14756556 (3), 16142694 (2), 2109323 (1), 1939154 (1) (see all 27) |
| intoxication |
37.07 |
4 |
2140788 (1), 9430652 (1), 9398176 (1) |
| shock |
13.66 |
11 |
8361337 (1), 12641431 (1), 18762224 (1), 15749383 (1) (see all 8) |
| glioma |
2.83 |
1 |
11358819 (1) |
| cancer |
0.00 |
3 |
18161940 (1), 11254220 (1), 19244119 (1) |
| carcinoma |
0.00 |
2 |
15534876 (1) |
| breast cancer |
0.00 |
2 |
16648488 (1), 15289310 (1) |
| tumors |
0.00 |
1 |
15660415 (1) |
| alzheimers disease |
0.00 |
3 |
1331687 (2), 16098202 (1) |
About this table
|
Medical News for EEF2(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for EEF2 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/220 PubMed articles for EEF2 gene (see all 220
):- Complete sequence of the coding region of human elongation factor 2 (EF-2) by enzymatic amplification of cDNA from human ovarian granulosa cells. (PubMed id 2610926)2, 3, 4 Rapp G.... Heinz K. (1989)
- A probability-based approach for high-throughput protein phosphorylation analysis and site localization. (PubMed id 16964243)3, 4 Beausoleil S.A.... Gygi S.P. (2006)
- Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983)3, 4 Olsen J.V....Mann M. (2006)
- Global phosphoproteome analysis on human HepG2 hepatocytes using reversed-phase diagonal LC. (PubMed id 16097034)3, 4 Gevaert K.... Vandekerckhove J. (2005)
- Large-scale characterization of HeLa cell nuclear phosphoproteins. (PubMed id 15302935)3, 4 Beausoleil S.A....Gygi S.P. (2004)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Construction of a plasmid containing the complete coding region of human elongation factor 2. (PubMed id 1596361)3, 4 Hanes J.... Scheit K.H. (1992)
- Cloning and sequence analysis of a cDNA from human ovarian granulosa cells encoding the C-terminal part of human elongation factor 2. (PubMed id 2840927)3, 4 Rapp G.... Scheit K.H. (1988)
- Chromosomal assignment of the gene for human elongation factor 2. (PubMed id 6427766)2, 3 Kaneda Y....Okada Y. (1984)
- Regulation of elongation factor-2 by multisite phosphorylation. (PubMed id 8386634)1, 3 Redpath N.T....Proud C.G. (1993)
|
Search for EEF2
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing EEF2
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing EEF2
(According to HUGE)
About This Section
| -- |
Specialized Databases showing EEF2(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for EEF2(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for EEF2:

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