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Aliases for EEF1DP3 Gene

Aliases for EEF1DP3 Gene

  • Eukaryotic Translation Elongation Factor 1 Delta Pseudogene 3 2 3 5
  • Putative EF-1-Delta-Like Pseudogene 3 Protein 4

External Ids for EEF1DP3 Gene

Previous GeneCards Identifiers for EEF1DP3 Gene

  • GC13P031422
  • GC13P032420
  • GC13P013232

Summaries for EEF1DP3 Gene

GeneCards Summary for EEF1DP3 Gene

EEF1DP3 (Eukaryotic Translation Elongation Factor 1 Delta Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for EEF1DP3 Gene

Genomics for EEF1DP3 Gene

Regulatory Elements for EEF1DP3 Gene

Enhancers for EEF1DP3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13G031846 0.9 ENCODE 0.7 +0.0 4 1.2 RB1 GLIS2 EGR1 ZNF143 ZNF207 EGR2 NFYC GATAD2B CBX8 MTA1 EEF1DP3 LOC105370152
GH13G031806 1 Ensembl ENCODE 0.3 -39.5 -39455 2.0 CTCF MTA2 NR2F1 MAX EBF1 DPF2 TBX21 RAD21 GABPA GATAD1 RXFP2 EEF1DP3
GH13G031773 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -73.1 -73091 1.2 FOS RXFP2 EEF1DP3
GH13G031764 1.1 Ensembl ENCODE dbSUPER 0.2 -79.9 -79878 5.5 ZNF211 HLF CEBPB MAFG JUND ZNF316 NFE2 NFE2L2 RXFP2 EEF1DP3
GH13G031742 1.4 Ensembl ENCODE dbSUPER 0.1 -104.5 -104469 0.6 ZBTB40 RAD21 YY1 ZNF335 ZNF143 RELB CREM IKZF2 ZNF654 CEBPB RXFP2 EEF1DP3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around EEF1DP3 on UCSC Golden Path with GeneCards custom track

Genomic Location for EEF1DP3 Gene

Chromosome:
13
Start:
31,846,783 bp from pter
End:
31,959,584 bp from pter
Size:
112,802 bases
Orientation:
Plus strand

Genomic View for EEF1DP3 Gene

Genes around EEF1DP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
EEF1DP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EEF1DP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for EEF1DP3 Gene

Proteins for EEF1DP3 Gene

  • Protein details for EEF1DP3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q658K8-EF1DL_HUMAN
    Recommended name:
    Putative elongation factor 1-delta-like protein
    Protein Accession:
    Q658K8
    Secondary Accessions:
    • Q08AR3

    Protein attributes for EEF1DP3 Gene

    Size:
    133 amino acids
    Molecular mass:
    14137 Da
    Quaternary structure:
    No Data Available

neXtProt entry for EEF1DP3 Gene

Post-translational modifications for EEF1DP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for EEF1DP3 Gene

Domains & Families for EEF1DP3 Gene

Protein Domains for EEF1DP3 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for EEF1DP3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q658K8

UniProtKB/Swiss-Prot:

EF1DL_HUMAN :
  • Belongs to the EF-1-beta/EF-1-delta family.
Family:
  • Belongs to the EF-1-beta/EF-1-delta family.
genes like me logo Genes that share domains with EEF1DP3: view

No data available for Gene Families for EEF1DP3 Gene

Function for EEF1DP3 Gene

Phenotypes for EEF1DP3 Gene

GenomeRNAi human phenotypes for EEF1DP3:
genes like me logo Genes that share phenotypes with EEF1DP3: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for EEF1DP3 Gene

Localization for EEF1DP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for EEF1DP3 Gene

Pathways & Interactions for EEF1DP3 Gene

SuperPathways for EEF1DP3 Gene

No Data Available

Interacting Proteins for EEF1DP3 Gene

Selected Interacting proteins: Q658K8-EF1DL_HUMAN for EEF1DP3 Gene via UniProtKB IID

Gene Ontology (GO) - Biological Process for EEF1DP3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for EEF1DP3 Gene

Drugs & Compounds for EEF1DP3 Gene

No Compound Related Data Available

Transcripts for EEF1DP3 Gene

mRNA/cDNA for EEF1DP3 Gene

(1) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(12) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for EEF1DP3 Gene

Eukaryotic translation elongation factor 1 delta pseudogene 3:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for EEF1DP3 Gene

No ASD Table

Relevant External Links for EEF1DP3 Gene

GeneLoc Exon Structure for
EEF1DP3
ECgene alternative splicing isoforms for
EEF1DP3

Expression for EEF1DP3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for EEF1DP3 Gene

mRNA differential expression in normal tissues according to GTEx for EEF1DP3 Gene

This gene is overexpressed in Heart - Left Ventricle (x6.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for EEF1DP3 Gene



NURSA nuclear receptor signaling pathways regulating expression of EEF1DP3 Gene:

EEF1DP3

SOURCE GeneReport for Unigene cluster for EEF1DP3 Gene:

Hs.507667
genes like me logo Genes that share expression patterns with EEF1DP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for EEF1DP3 Gene

Orthologs for EEF1DP3 Gene

Evolution for EEF1DP3 Gene

ENSEMBL:
Gene Tree for EEF1DP3 (if available)
TreeFam:
Gene Tree for EEF1DP3 (if available)

No data available for Orthologs for EEF1DP3 Gene

Paralogs for EEF1DP3 Gene

(1) SIMAP similar genes for EEF1DP3 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with EEF1DP3: view

No data available for Paralogs for EEF1DP3 Gene

Variants for EEF1DP3 Gene

Sequence variations from dbSNP and Humsavar for EEF1DP3 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1000030570 -- 31,879,310(+) GTGGT(A/G)GTAAA intron-variant
rs1000048688 -- 31,937,974(+) TTTTT(C/T)TGAAA intron-variant
rs1000061856 -- 31,938,541(+) GTATT(C/G)TATCA intron-variant
rs1000076588 -- 31,951,712(+) CACAA(A/C)TGAGG intron-variant
rs1000131185 -- 31,853,382(+) ACAAG(A/G)TGATT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for EEF1DP3 Gene

Variant ID Type Subtype PubMed ID
dgv30e203 CNV loss 21179565
dgv3101n54 CNV loss 21841781
dgv319n67 CNV loss 20364138
dgv325e214 CNV loss 21293372
dgv343e199 CNV deletion 23128226
dgv344e199 CNV deletion 23128226
dgv45n17 CNV loss 16327808
dgv78n111 CNV deletion 26073780
esv1602380 CNV insertion 17803354
esv2162274 CNV deletion 18987734
esv2421804 CNV deletion 20811451
esv2536115 CNV deletion 19546169
esv26361 CNV loss 19812545
esv2668742 CNV deletion 23128226
esv2747240 CNV deletion 23290073
esv2747242 CNV deletion 23290073
esv33375 CNV loss 17666407
esv3550281 CNV deletion 23714750
esv3580593 CNV loss 25503493
esv3580595 CNV loss 25503493
esv3584656 CNV loss 24956385
esv3631706 CNV loss 21293372
esv3631709 CNV loss 21293372
esv3631711 CNV loss 21293372
esv3892323 CNV loss 25118596
esv3892324 CNV loss 25118596
nsv1042972 CNV loss 25217958
nsv1069059 CNV deletion 25765185
nsv1069744 CNV deletion 25765185
nsv1160096 CNV deletion 26073780
nsv442666 CNV loss 18776908
nsv498809 CNV loss 21111241
nsv514692 CNV loss 21397061
nsv517120 CNV loss 19592680
nsv64730 CNV deletion 16902084
nsv9064 CNV loss 18304495
nsv974238 CNV deletion 23825009
nsv989 CNV deletion 18451855
nsv990 CNV deletion 18451855

Relevant External Links for EEF1DP3 Gene

Human Gene Mutation Database (HGMD)
EEF1DP3
SNPedia medical, phenotypic, and genealogical associations of SNPs for
EEF1DP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for EEF1DP3 Gene

Disorders for EEF1DP3 Gene

Relevant External Links for EEF1DP3

Genetic Association Database (GAD)
EEF1DP3
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
EEF1DP3

No disorders were found for EEF1DP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for EEF1DP3 Gene

Publications for EEF1DP3 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 64
  2. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3 64
  3. The full-ORF clone resource of the German cDNA consortium. (PMID: 17974005) Bechtel S. … Schupp I. (BMC Genomics 2007) 4 64
  4. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel D.P. … Karasik D. (BMC Med. Genet. 2007) 46 64
  5. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 46 64

Products for EEF1DP3 Gene

Sources for EEF1DP3 Gene

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