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Aliases & Descriptions for EEA1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| MST105 2 | | MSTP105 2 | | ZFYVE2 1, 2, 3 |
| | | Descriptions |
|---|
| Endosome-associated protein p162 3 | | Zinc finger FYVE domain-containing protein 2 3 | | early endosome antigen 1 2 | | early endosome antigen 1, 162kD 1, 2 | | early endosome-associated protein 2 |
|
| | Search outside databases for aliases for EEA1 genePrevious GC identifers: GC12M092561 GC12M093628 GC12M093102 GC12M091671 |
Summaries for EEA1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: EEA1_HUMAN, Q15075Function: Binds phospholipid vesicles containing phosphatidylinositol 3-phosphate and participates in endosomal trafficking |
Genomic Location for EEA1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the EEA1 gene 
Entrez Gene cytogenetic band: 12q22 Ensembl cytogenetic band: 12q22 HGNC cytogenetic band: 12q22EEA1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 12 GeneLoc Exon Structure GeneLoc location for GC12M091668:
(about GC identifiers)
Start:
|
91,690,416 bp from pter |
End:
|
91,847,238 bp from pter |
Size:
|
156,823 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000012.10 NT_019546.15
| Proteins for EEA1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: EEA1_HUMAN, Q15075 (See
protein sequence)Recommended Name: Early endosome antigen 1 Size: 1411 amino acids; 162466 Da
Subunit: Homodimer. Binds STX6. Binds RAB5A, RAB5B, RAB5C and RAB22A that have been activated by GTP-binding
Subcellular location: Cytoplasm. Early endosome membrane; Peripheral membrane protein
PDB structures from and Proteopedia :1HYI (3D)
 1HYJ (3D)
 1JOC (3D)
 
Secondary accessions: Q14221Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_003557.2
ENSEMBL proteins: ENSP00000317955
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
5/8 Gene Ontology (GO) cellular component terms (links to tree view) (see all 8
): About this table
Antibodies for EEA1: Assays for EEA1: | Protein
Domains/ Families for EEA1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q15075
ProtoNet protein and cluster: Q15075 1 Blocks protein family: IPB000306 Zn-finger
UniProtKB/Swiss-Prot: EEA1_HUMAN, Q15075Domain: The FYVE-type zinc finger domain mediates interactions with phosphatidylinositol 3-phosphateSimilarity: Contains 1 C2H2-type zinc fingerSimilarity: Contains 1 FYVE-type zinc finger | Gene Function for EEA1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_003566
Applied Biosystems Silencer® siRNAs for EEA1
Sigma-Aldrich siRNA for EEA1  Sigma-Aldrich shRNA for EEA1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_003566                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_003566                                  untagged cDNA clone in CMV expression vector: NM_003566 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_003566
UniProtKB/Swiss-Prot: EEA1_HUMAN, Q15075Function: Binds phospholipid vesicles containing phosphatidylinositol 3-phosphate and participates in endosomal trafficking5/6 Gene Ontology (GO) molecular function terms (links to tree view) (see all 6
): About this table | Pathways & Interactions for EEA1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
Gene Network CentralTM Interacting Genes and Proteins Network for EEA1 
5/41 Interacting proteins for EEA1 (Q150751, 2 ENSP000003179553) via UniProtKB, MINT, and/or STRING (see all 41
)| Interactant | Interaction Details |
|---|
| GeneCard | External ID(s) |
|---|
| RAB5B | P610201, ENSP000003534443 | EBI-298113, EBI-399401 STRING (score=.994) | | RAB22A | Q9UL261, ENSP000002440403 | EBI-298113, EBI-399456 STRING (score=.827) | | ZFYVE16 | Q7Z3T81, ENSP000003371593 | EBI-298113, EBI-298055 STRING (score=.749) | | RAB5A | P203391, 2, ENSP000002730473 | EBI-298113, EBI-399437 MINT-2883035 EBI-298113, EBI-399437 MINT-2883035 STRING (score=.999) | | TOM1 | O607841 | EBI-298113, EBI-74634 | About this table
3 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for EEA1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for EEA1 10 Novoseek chemical compound relationships for EEA1 gene
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| phosphatidylinositol 3-phosphate |
92.12 |
34 |
11602609 (5), 12857876 (4), 11329382 (2), 16522686 (1) (see all 13) |
| ptdins(3)p |
84.08 |
21 |
11564757 (3), 11329382 (3), 16141328 (2), 10652369 (2) (see all 9) |
| wortmannin |
63.74 |
2 |
14521088 (1), 10332740 (1) |
| phosphatidylinositol |
58.11 |
10 |
16522686 (1), 12911814 (1), 17651088 (1), 10332740 (1) (see all 7) |
| phosphoinositide |
51.59 |
1 |
16141328 (1) |
| mannose 6-phosphate |
34.83 |
2 |
11404461 (1) |
| cholesterol |
12.74 |
2 |
12584196 (2) |
| lipid |
12.67 |
1 |
14578346 (1) |
| tyrosine |
11.46 |
2 |
11370743 (1), 11918675 (1) |
| zinc |
0.00 |
4 |
14597214 (1), 17890395 (1), 10458612 (1) |
About this table
|
Transcripts for EEA1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_003566
Sigma-Aldrich siRNA for EEA1  Sigma-Aldrich shRNA for EEA1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_003566 REFSEQ mRNAs for EEA1 gene: NM_003566.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_003566               OriGene GFP tagged cDNA clone in CMV expression vector: NM_003566                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_003566                                  untagged cDNA clone in CMV expression vector: NM_003566  Additional cDNA sequence: AF173389.1 AK292008.1 AK307918.1 BC017837.1 BC041930.1 BX648463.1 L40157.1 X78998.1 5 DOTS entries: DT.312811 DT.100790733 DT.121114015 DT.86841244 DT.91938349 24/163 AceView cDNA sequences (see all 163
):BF515615 BU160820 R58333 BX495378 AW954338 BU161988 BG493301 BI092315 H38659 BE218993 CA313002 CA435240 BF512066 AI918294 BC017837 X78998 BQ954298 AI815086 BU620283 AU139787 BE018194 AA278514 AA130246 CB157397
highest scoring ESTs for EEA1:L40157 AU139787 BC017837 BF574207 H99557 X78998 AA012970 AA039504 AA133971 AA258032 Unigene Cluster for EEA1: Early endosome antigen 1 Hs.567367 [show with all ESTs]Unigene Representative Sequence: NM_003566
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000322349
|
Expression for EEA1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| EEA1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for EEA1
1 / 2 / 3 8 probe-sets matching EEA1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TAGTTGTGCC
SOURCE GeneReport for Unigene cluster: Hs.567367
Expression variation in blood from EXPOLDB for EEA1 |
Orthologs for EEA1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for EEA1 gene from 5/11 species (see all 11
)
About this table Species with no ortholog for EEA1
ENSEMBL Gene Tree for EEA1 | Paralogs for EEA1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for EEA1 gene
- PCNT2 TPR2 AKAP92
|
SNPs/Variants for EEA1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for EEA1 (up to first 250kb)
|
Disorders & Mutations for EEA1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 605070
UniProtKB/Swiss-Prot: EEA1_HUMAN, Q15075
Antibodies against EEA1 are found in sera from patients with subacute cutaneous lupus erythematosus and other autoimmune diseases3 Novoseek disease relationships for EEA1 gene
About this table
|
Medical News for EEA1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for EEA1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/121 PubMed articles for EEA1 gene (see all 121
):- EEA1 links PI(3)K function to Rab5 regulation of endosome fusion. (PubMed id 9697774)1, 2, 3, 4 Simonsen A....Stenmark H. (1998)
- EEA1, an early endosome-associated protein. EEA1 is a conserved alpha-helical peripheral membrane protein flanked by cysteine 'fingers' and contains a calmodulin-binding IQ motif. (PubMed id 7768953)2, 3, 4 Mu F.-T....Toh B.-H. (1995)
- The Rab5 effector EEA1 interacts directly with syntaxin-6. (PubMed id 10506127)1, 3, 4 Simonsen A.... Stenmark H. (1999)
- Direct interaction of EEA1 with Rab5b. (PubMed id 10491193)1, 3, 4 Callaghan J.M.... Stenmark H. (1999)
- Structural mechanism of endosome docking by the FYVE domain. (PubMed id 11230696)1, 3, 4 Kutateladze T.G. and Overduin M. (2001)
- Determinants of Rab5 interaction with the N-terminus of early endosome antigen 1. (PubMed id 12493736)3, 4 Merithew E.... Lambright D.G. (2003)
- The small GTPase Rab22 interacts with EEA1 and controls endosomal membrane trafficking. (PubMed id 11870209)3, 4 Kauppi M.... Olkkonen V.M. (2002)
- Multivalent endosome targeting by homodimeric EEA1. (PubMed id 11741531)3, 4 Dumas J.J.... Lambright D.G. (2001)
- Interaction of the EEA1 FYVE finger with phosphatidylinositol 3- phosphate and early endosomes. Role of conserved residues. (PubMed id 10807926)3, 4 Gaullier J.-M.... Stenmark H. (2000)
- Phosphatidylinositol 3-phosphate recognition by the FYVE domain. (PubMed id 10394369)3, 4 Kutateladze T.G.... Overduin M. (1999)
|
Search for EEA1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing EEA1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing EEA1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing EEA1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for EEA1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for EEA1:

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| Antibodies & Assays for EEA1  |
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Incremental update: 13 Oct 2009
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