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Aliases for ECRP Gene

Aliases for ECRP Gene

  • Ribonuclease A Family Member 2 Pseudogene 3

External Ids for ECRP Gene

Previous GeneCards Identifiers for ECRP Gene

  • GC14P021389

Summaries for ECRP Gene

GeneCards Summary for ECRP Gene

ECRP (Ribonuclease A Family Member 2 Pseudogene) is a Pseudogene.

Additional gene information for ECRP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ECRP Gene

Genomics for ECRP Gene

Regulatory Elements for ECRP Gene

Enhancers for ECRP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14H020918 0.5 Ensembl 0.7 -0.1 -138 1 PKNOX1 NFIA CEBPA CEBPB CEBPG ECRP RNASE3
GH14H020904 0.4 ENCODE 0.4 -14.8 -14755 0 CTCF RAD21 ENSG00000136315 ECRP RNASE3
GH14H020890 0.2 Ensembl 0.3 -27.7 -27745 1 ENSG00000136315 RNASE3 ECRP
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ECRP on UCSC Golden Path with GeneCards custom track

Genomic Location for ECRP Gene

Chromosome:
14
Start:
20,919,341 bp from pter
End:
20,920,176 bp from pter
Size:
836 bases
Orientation:
Plus strand

Genomic View for ECRP Gene

Genes around ECRP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ECRP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ECRP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ECRP Gene

Proteins for ECRP Gene

  • Protein details for ECRP Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q12762
    Recommended name:
    Eosinophil cationic-related protein
    Protein Accession:
    Q12762

    Protein attributes for ECRP Gene

    Size:
    159 amino acids
    Molecular mass:
    18453 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ECRP Gene

Post-translational modifications for ECRP Gene

No Post-translational modifications

No data available for DME Specific Peptides for ECRP Gene

Domains & Families for ECRP Gene

Protein Domains for ECRP Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for ECRP Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ECRP: view

No data available for Gene Families and UniProtKB/Swiss-Prot for ECRP Gene

Function for ECRP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ECRP Gene

Localization for ECRP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ECRP Gene

Pathways & Interactions for ECRP Gene

No Data Available

Interacting Proteins for ECRP Gene

Gene Ontology (GO) - Biological Process for ECRP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ECRP Gene

Drugs & Compounds for ECRP Gene

No Compound Related Data Available

Transcripts for ECRP Gene

mRNA/cDNA for ECRP Gene

(3) Additional mRNA sequences :

Unigene Clusters for ECRP Gene

Ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin) pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ECRP Gene

No ASD Table

Relevant External Links for ECRP Gene

GeneLoc Exon Structure for
ECRP

Expression for ECRP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ECRP Gene

mRNA differential expression in normal tissues according to GTEx for ECRP Gene

This gene is overexpressed in Whole Blood (x33.3).

Protein differential expression in normal tissues from HIPED for ECRP Gene

This gene is overexpressed in Urine (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for ECRP Gene



Protein tissue co-expression partners for ECRP Gene

SOURCE GeneReport for Unigene cluster for ECRP Gene:

Hs.730362
genes like me logo Genes that share expression patterns with ECRP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ECRP Gene

Orthologs for ECRP Gene

No data available for Orthologs and Evolution for ECRP Gene

Paralogs for ECRP Gene

(4) SIMAP similar genes for ECRP Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ECRP: view

No data available for Paralogs for ECRP Gene

Variants for ECRP Gene

Sequence variations from dbSNP and Humsavar for ECRP Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs1002688941 -- 20,918,905(+) CAAGG(A/T)TATTA intron-variant, upstream-variant-2KB
rs1003697407 -- 20,917,691(+) CTGGG(A/G)CTGCA intron-variant, upstream-variant-2KB
rs1003746929 -- 20,918,042(+) AAAGG(C/T)CTGAT intron-variant, upstream-variant-2KB
rs1005205286 -- 20,920,601(+) TTGTA(C/G)AGTCA intron-variant, downstream-variant-500B
rs1005552822 -- 20,920,213(+) GTCAG(C/T)ATCTG intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for ECRP Gene

Variant ID Type Subtype PubMed ID
dgv1798n100 CNV gain+loss 25217958
dgv1799n100 CNV loss 25217958
dgv1800n100 CNV gain 25217958
dgv1801n100 CNV gain 25217958
dgv1802n100 CNV loss 25217958
dgv34e203 CNV gain+loss 21179565
dgv3540n54 CNV loss 21841781
dgv363n67 CNV gain 20364138
dgv380e214 CNV gain 21293372
dgv381e214 CNV loss 21293372
esv2421825 OTHER complex 20811451
esv2748448 CNV deletion 23290073
esv2759972 CNV gain+loss 17122850
esv29488 CNV loss 19812545
esv3584663 CNV loss 24956385
esv3892467 CNV gain+loss 25118596
esv3892468 CNV loss 25118596
nsv1044554 CNV gain 25217958
nsv1050170 CNV gain+loss 25217958
nsv1204 CNV deletion 18451855
nsv428293 CNV gain+loss 18775914
nsv433274 CNV loss 18776910
nsv436831 CNV insertion 17901297
nsv442680 CNV gain+loss 18776908
nsv456146 CNV loss 19166990
nsv470622 CNV loss 18288195
nsv498822 CNV loss 21111241
nsv514731 CNV gain+loss 21397061
nsv517174 CNV gain+loss 19592680
nsv563847 CNV loss 21841781
nsv563848 CNV loss 21841781
nsv817619 CNV gain 17921354
nsv817620 CNV loss 17921354
nsv832740 CNV gain 17160897
nsv9121 CNV gain+loss 18304495
nsv983967 CNV duplication 23825009

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for ECRP Gene

Disorders for ECRP Gene

Relevant External Links for ECRP

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ECRP

No disorders were found for ECRP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ECRP Gene

Publications for ECRP Gene

  1. Faecal eosinophil cationic protein and serum immunoglobulin E in relation to infant feeding practices. (PMID: 27194747) Hua MC … Huang JL (Annals of clinical biochemistry 2017) 3 60
  2. An insertion in loop L7 of human eosinophil-derived neurotoxin is crucial for its antiviral activity. (PMID: 22581709) Sikriwal D … Batra JK (Journal of cellular biochemistry 2012) 3 60
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for ECRP Gene

Sources for ECRP Gene

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