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Aliases for ECM1P1 Gene

Subcategory (RNA class) for ECM1P1 Gene

lncRNA

Aliases for ECM1P1 Gene

  • Extracellular Matrix Protein 1 Pseudogene 1 2 3 5

External Ids for ECM1P1 Gene

ORGUL Members for ECM1P1 Gene

Summaries for ECM1P1 Gene

GeneCards Summary for ECM1P1 Gene

ECM1P1 (Extracellular Matrix Protein 1 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for ECM1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ECM1P1 Gene

Genomics for ECM1P1 Gene

Regulatory Elements for ECM1P1 Gene

Enhancers for ECM1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H004762 1.2 Ensembl ENCODE 0.4 +6.9 6890 2 PKNOX1 FOXA2 ARNT ARID4B FEZF1 ZNF2 TCF12 ZNF143 ATF7 RUNX3 ECM1P1 AK3
GH09H004759 0.8 Ensembl 0.4 +9.9 9865 1 BCOR HDGF CTCF MAX ZNF2 RAD21 CHAMP1 CC2D1A PATZ1 ADNP ECM1P1 AK3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ECM1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ECM1P1 Gene

Chromosome:
9
Start:
4,768,617 bp from pter
End:
4,769,895 bp from pter
Size:
1,279 bases
Orientation:
Minus strand

Genomic View for ECM1P1 Gene

Genes around ECM1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ECM1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ECM1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ECM1P1 Gene

Proteins for ECM1P1 Gene

Post-translational modifications for ECM1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ECM1P1 Gene

Domains & Families for ECM1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ECM1P1 Gene

Function for ECM1P1 Gene

Phenotypes From GWAS Catalog for ECM1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ECM1P1 Gene

Localization for ECM1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ECM1P1 Gene

Pathways & Interactions for ECM1P1 Gene

SuperPathways for ECM1P1 Gene

No Data Available

Interacting Proteins for ECM1P1 Gene

Gene Ontology (GO) - Biological Process for ECM1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ECM1P1 Gene

Drugs & Compounds for ECM1P1 Gene

No Compound Related Data Available

Transcripts for ECM1P1 Gene

mRNA/cDNA for ECM1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ECM1P1 Gene

No ASD Table

Relevant External Links for ECM1P1 Gene

GeneLoc Exon Structure for
ECM1P1
ECgene alternative splicing isoforms for
ECM1P1

Expression for ECM1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ECM1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of ECM1P1 Gene:

ECM1P1
genes like me logo Genes that share expression patterns with ECM1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ECM1P1 Gene

Orthologs for ECM1P1 Gene

Evolution for ECM1P1 Gene

ENSEMBL:
Gene Tree for ECM1P1 (if available)
TreeFam:
Gene Tree for ECM1P1 (if available)

No data available for Orthologs for ECM1P1 Gene

Paralogs for ECM1P1 Gene

No data available for Paralogs for ECM1P1 Gene

Variants for ECM1P1 Gene

Relevant External Links for ECM1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ECM1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ECM1P1 Gene

Disorders for ECM1P1 Gene

No disorders were found for ECM1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ECM1P1 Gene

Publications for ECM1P1 Gene

No publications were found for ECM1P1 Gene.

Products for ECM1P1 Gene

Sources for ECM1P1 Gene

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