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Aliases & Descriptions for E2F5
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Descriptions E2F transcription factor 5 2 E2F transcription factor 5, p130-binding 2
Search outside databases for aliases for E2F5 genePrevious GC identifers: GC08P084913 GC08P086046 GC08P085869 GC08P086164
Summaries for E2F5 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for E2F5 : The protein encoded by this gene is a member of the E2F family of transcription factors. The E2Ffamily plays a crucial role in the control of cell cycle and action of tumor suppressor proteinsand is also a target of the transforming proteins of small DNA tumor viruses. The E2F proteinscontain several evolutionarily conserved domains that are present in most members of the family.These domains include a DNA binding domain, a dimerization domain which determines interactionwith the differentiation regulated transcription factor proteins (DP), a transactivation domainenriched in acidic amino acids, and a tumor suppressor protein association domain which isembedded within the transactivation domain. This protein is differentially phosphorylated and isexpressed in a wide variety of human tissues. It has higher identity to E2F4 than to other familymembers. Both this protein and E2F4 interact with tumor suppressor proteins p130 and p107, but notwith pRB. Alternative splicing results in multiple variants encoding different isoforms. [providedby RefSeq] UniProtKB/Swiss-Prot: E2F5_HUMAN, Q15329 Function : Transcriptional activator that binds to E2F sites, these sites are present in thepromoter of many genes whose products are involved in cell proliferation. May mediate growthfactor-initiated signal transduction. It is likely involved in the early responses of restingcells to growth factor stimulation
Gene Wiki entry for E2F5
Genomic Location for E2F5
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
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UCSC and
Ensembl ,
Transcription factor binding sites according to
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the E2F5 gene Entrez Gene cytogenetic band: 8q21.2 Ensembl cytogenetic band: 8q21.2 HGNC cytogenetic band: 8q21.2 E2F5 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 8 GeneLoc Exon Structure
GeneLoc location for GC08P086276:
(about GC identifiers )
Start:
86,276,871 bp from pter
End:
86,314,005 bp from pter
Size:
37,135 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000008.9 NT_008183.18 Proteins for E2F5
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: E2F5_HUMAN, Q15329 (See
protein sequence )Recommended Name: Transcription factor E2F5 Size : 346 amino acids; 37610 Da
Subunit : Component of the DRTF1/E2F transcription factor complex. Binds cooperatively with DP-1 toE2F sites. Interaction with retinoblastoma protein RB1 or proteins RBL1 and RBL2 inhibits the E2Ftransactivation domain. Component of the DREAM complex (also named LINC complex) at least composedof E2F4, E2F5, LIN9, LIN37, LIN52, LIN54, MYBL1, MYBL2, RBL1, RBL2, RBBP4, TFDP1 and TFDP2. Thecomplex exists in quiescent cells where it represses cell cycle-dependent genes. It dissociates inS phase when LIN9, LIN37, LIN52 and LIN54 form a subcomplex that binds to MYBL2
Subcellular location : Nucleus
Secondary accessions : Q16601 Q92756
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (3 alternative transcripts):
NP_001077057.1 NP_001077058.1 NP_001942.2 ENSEMBL proteins: ENSP00000256117 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 4 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for E2F5: Assays for E2F5:
Protein
Domains/ Families for E2F5(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q15329 ProtoNet protein and cluster: Q15329
1 Blocks protein family : IPB003316 Transcription factor E2F/dimerisation partner (TDP) UniProtKB/Swiss-Prot: E2F5_HUMAN, Q15329 Similarity : Belongs to the E2F/DP family
Gene Function for E2F5
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
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RNAi Products ,
Clones , and
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Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_001083588 Applied Biosystems Silencer ® siRNAs for E2F5 Sigma-Aldrich siRNA for E2F5 Sigma-Aldrich shRNA Panels and shRNA for E2F5 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001083588                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001083588                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001083588  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001951 UniProtKB/Swiss-Prot: E2F5_HUMAN, Q15329 Function : Transcriptional activator that binds to E2F sites, these sites are present in thepromoter of many genes whose products are involved in cell proliferation. May mediate growthfactor-initiated signal transduction. It is likely involved in the early responses of restingcells to growth factor stimulation
10 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for E2f5) :2 Gene Ontology (GO) molecular function terms (links to tree view) :
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Pathways & Interactions for E2F5
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/7 Sigma-Aldrich "Your Favorite Gene" Pathways for E2F5 (Your Favorite Gene powered by Ingenuity) (see all 7
) Gene Network CentralTM Interacting Genes and Proteins Network for E2F5 5/28 Interacting proteins for E2F5 (ENSP00000256117 3 ) via UniProtKB, MINT, and/or STRING (see all 28
)About this table 3 Gene Ontology (GO) biological process terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0006350 transcription
IEA -- GO:0006355 regulation of transcription, DNA-dependent
IEA -- GO:0009887 organ morphogenesis
IEA --
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Drugs & Compounds for E2F5 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for E2F5 1 Novoseek chemical compound relationship for E2F5 gene
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
dihydrofolate
39.05
1
10823896 (1)
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Transcripts for E2F5(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_001083588 Sigma-Aldrich siRNA for E2F5 Sigma-Aldrich shRNA Panels and shRNA for E2F5 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001083588 NM_001083589 NM_001951
REFSEQ mRNAs for E2F5 gene (3 alternative transcripts): NM_001083588.1 NM_001083589.1 NM_001951.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001083588 NM_001083589 NM_001951
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001083588                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001083588                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001083588  
Additional cDNA sequence: CR599340.1 CR605094.1 U15642.1 U31556.1 X86097.1 Z78409.1
7 DOTS entries : DT.91767898 DT.95165122 DT.95257961 DT.305579 DT.100813249 DT.86846772 DT.95165120
24/91 AceView cDNA sequences (see all 91
):AA766588 AA748780 BX117249 BM698762 BX091085 BF116070 AA455521 AW051475 BG282688 CR605094 AI066452 AA484938 AW589432 AA723164 BU735902 AA991290 CR599340 AI740797 X86097 BE878145 AI288540 BF740154 AW027851 Z78409
highest scoring ESTs for E2F5 :U15642 U31556 AA286972 AA455521 AA723164 AA743346 AA766588 AA978108 AA991290 AI066452
Unigene Cluster for E2F5: E2F transcription factor 5, p130-binding Hs.445758 [show with all ESTs ] Unigene Representative Sequence: X86097 GeneLoc Exon Structure 3 Alternative Splicing Database (ASD) splice patterns (SP) for E2F5 ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b ^ 7a · 7b SP1 :                     SP2 :                     SP3 :                    
About this scheme ECgene alternative splicing isoforms for E2F5 1 Ensembl transcript including schematic representation : ENST00000256117
Expression for E2F5
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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E2F5 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for E2F5 1 / 2 / 3
6 probe-sets matching E2F5 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GAAACTTGGGSOURCE GeneReport for Unigene cluster: Hs.445758 Expression variation in blood from EXPOLDB for E2F5
Orthologs for E2F5
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for E2F5 gene from 5/9 species (see all 9
)
About this table Species with no ortholog for E2F5 ENSEMBL Gene Tree for E2F5 Paralogs for E2F5 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for E2F5 gene E2F4 2 E2F6 2
SNPs/Variants for E2F5 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for E2F5 (up to first 250kb)
Disorders & Mutations for E2F5
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
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OMIM: 600967 4 Novoseek disease relationships for E2F5 gene
About this table Human Genome Epidemiology Navigator: E2F5 (1 document)
Medical News for E2F5 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for E2F5 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/61 PubMed articles for E2F5 gene (see all 61
): E2F-4 and E2F-5, two members of the E2F family, are expressed in the early phases of the cell cycle. (PubMed id 7892279) 1, 2, 3, 4 Sardet C....Weinberg R.A. (1995) The molecular and functional characterization of E2F-5 transcription factor. (PubMed id 9464260) 1, 3, 4 Vaishnav Y.N.... Pant V. (1998) Structural characterization and specificity of expression of E2F-5: a new member of the E2F family of transcription factors. (PubMed id 8589754) 1, 3, 4 Itoh A....Mitsialis S.A. (1995) E2F-5, a new E2F family member that interacts with p130 in vivo. (PubMed id 7760804) 3, 4 Hijmans E.M....Bernards R. (1995) Regulation of E2F transcription by cyclin E-Cdk2 kinase mediated through p300/CBP co-activators. (PubMed id 10783242) 1, 3 Morris L....La Thangue N.B. (2000) Common genetic variation in candidate genes and susceptibility to subtypes of breast cancer. (PubMed id 19124506) 3 Mavaddat N....Pharoah P.D. (2009) Overexpression of E2F-5 correlates with a pathological basal phenotype and a worse clinical outcome. (PubMed id 19259095) 3 Umemura S....Osamura Y.R. (2009) Overexpression of E2F5/p130, but not E2F5 alone, can inhibit E2F-induced cell cycle entry in transgenic mice. (PubMed id 18385796) 3 Chen Q....Overbeek P.A. (2008) Evolutionarily conserved multisubunit RBL2/p130 and E2F4 protein complex represses human cell cycle-dependent genes in quiescence. (PubMed id 17531812) 4 Litovchick L.... DeCaprio J.A. (2007) Induction of human metallothionein 1G promoter by VEGF and heavy metals: differential involvement of E2F and metal transcription factors. (PubMed id 15735762) 3 Joshi B....Chellappan S. (2005)
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Genome Databases showing E2F5
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and/or
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Other Databases showing E2F5
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Specialized Databases showing E2F5 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for E2F5 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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