Free for academic non-profit institutions. Other users need a Commercial license

Aliases for DYX1C1-CCPG1 Gene

Subcategory (RNA class) for DYX1C1-CCPG1 Gene


Quality Score for this RNA gene is


Aliases for DYX1C1-CCPG1 Gene

  • DYX1C1-CCPG1 Readthrough (NMD Candidate) 2 3 5

External Ids for DYX1C1-CCPG1 Gene

Previous GeneCards Identifiers for DYX1C1-CCPG1 Gene

  • GC15U901336
  • GC15M055669
  • GC15M055652

Summaries for DYX1C1-CCPG1 Gene

Entrez Gene Summary for DYX1C1-CCPG1 Gene

  • This locus represents naturally occurring read-through transcription between the neighboring dyslexia susceptibility 1 candidate 1 (DYX1C1) and cell cycle progression 1 (CCPG1) genes on chromosome 15. The read-through transcript is a candidate for nonsense-mediated mRNA decay (NMD), and is thus unlikely to produce a protein product. [provided by RefSeq, Mar 2011]

GeneCards Summary for DYX1C1-CCPG1 Gene

DYX1C1-CCPG1 (DYX1C1-CCPG1 Readthrough (NMD Candidate)) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DYX1C1-CCPG1 Gene

Genomics for DYX1C1-CCPG1 Gene

Regulatory Elements for DYX1C1-CCPG1 Gene

Enhancers for DYX1C1-CCPG1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15F055497 1 ENCODE 0.8 +0.2 150 1.4 ARID4B SIN3A DMAP1 ZNF48 ZNF2 YY1 GTF3C2 ZNF143 MXD4 ZNF518A RSL24D1 PYGO1 C15orf65 PIGB DYX1C1 DYX1C1-CCPG1 LOC100420711
GH15F055494 0.5 Ensembl ENCODE 0.8 +3.3 3284 1.4 RSL24D1 C15orf65 RAB27A DYX1C1 DYX1C1-CCPG1 LOC100420711
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DYX1C1-CCPG1 on UCSC Golden Path with GeneCards custom track

Promoters for DYX1C1-CCPG1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001452358 184 1600 ARID4B SIN3A DMAP1 ZNF48 ZNF2 YY1 GTF3C2 ZNF143 NFYC MXD4

Genomic Location for DYX1C1-CCPG1 Gene

55,355,223 bp from pter
55,498,584 bp from pter
143,362 bases
Minus strand

Genomic View for DYX1C1-CCPG1 Gene

Genes around DYX1C1-CCPG1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DYX1C1-CCPG1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DYX1C1-CCPG1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DYX1C1-CCPG1 Gene

Proteins for DYX1C1-CCPG1 Gene

Post-translational modifications for DYX1C1-CCPG1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DYX1C1-CCPG1 Gene

Domains & Families for DYX1C1-CCPG1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DYX1C1-CCPG1 Gene

Function for DYX1C1-CCPG1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DYX1C1-CCPG1 Gene

Localization for DYX1C1-CCPG1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DYX1C1-CCPG1 Gene

Pathways & Interactions for DYX1C1-CCPG1 Gene

SuperPathways for DYX1C1-CCPG1 Gene

No Data Available

Interacting Proteins for DYX1C1-CCPG1 Gene

Gene Ontology (GO) - Biological Process for DYX1C1-CCPG1 Gene


No data available for Pathways by source and SIGNOR curated interactions for DYX1C1-CCPG1 Gene

Transcripts for DYX1C1-CCPG1 Gene

mRNA/cDNA for DYX1C1-CCPG1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DYX1C1-CCPG1 Gene

No ASD Table

Relevant External Links for DYX1C1-CCPG1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for DYX1C1-CCPG1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DYX1C1-CCPG1 Gene

genes like me logo Genes that share expression patterns with DYX1C1-CCPG1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for DYX1C1-CCPG1 Gene

Orthologs for DYX1C1-CCPG1 Gene

Evolution for DYX1C1-CCPG1 Gene

Gene Tree for DYX1C1-CCPG1 (if available)
Gene Tree for DYX1C1-CCPG1 (if available)

No data available for Orthologs for DYX1C1-CCPG1 Gene

Paralogs for DYX1C1-CCPG1 Gene

No data available for Paralogs for DYX1C1-CCPG1 Gene

Variants for DYX1C1-CCPG1 Gene

Sequence variations from dbSNP and Humsavar for DYX1C1-CCPG1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs397515621 Pathogenic 55,439,557(-) AGGCA(C/T)GAAGA nc-transcript-variant, reference, stop-gained
rs397515622 Pathogenic 55,491,203(-) CACAA(G/T)AGAGA nc-transcript-variant, reference, stop-gained
rs748763190 Uncertain significance 55,439,467(+) AACAA(C/T)TTACT intron-variant
rs57914590 Benign 55,491,144(+) AGTGC(A/G/T)TATTT nc-transcript-variant, reference, synonymous-codon, stop-gained
rs600753 Benign 55,466,995(+) TTCTT(C/T)CTTCT nc-transcript-variant, reference, missense

Structural Variations from Database of Genomic Variants (DGV) for DYX1C1-CCPG1 Gene

Variant ID Type Subtype PubMed ID
nsv984074 CNV duplication 23825009
nsv951964 CNV deletion 24416366
nsv833016 CNV gain 17160897
nsv817693 CNV loss 17921354
nsv569539 CNV loss 21841781
nsv569530 CNV loss 21841781
nsv569523 CNV gain 21841781
nsv520799 CNV loss 19592680
nsv475201 CNV novel sequence insertion 20440878
nsv1542 CNV insertion 18451855
nsv1113713 CNV deletion 24896259
nsv1043789 CNV gain 25217958
esv9731 CNV loss 19470904
esv3892697 CNV loss 25118596
esv3636565 CNV loss 21293372
esv3636564 CNV loss 21293372
esv3636562 CNV loss 21293372
esv3636560 CNV loss 21293372
esv3636558 CNV loss 21293372
esv3636557 CNV loss 21293372
esv3569598 CNV gain 25503493
esv3552487 CNV deletion 23714750
esv3390087 CNV insertion 20981092
esv3373880 CNV insertion 20981092
esv3365892 CNV insertion 20981092
esv29128 CNV loss 19812545
esv2761899 CNV gain+loss 21179565
esv2749724 CNV deletion 23290073
esv2663013 CNV deletion 23128226
dgv4547n54 CNV loss 21841781
dgv4546n54 CNV loss 21841781
dgv4545n54 CNV loss 21841781
dgv4544n54 CNV loss 21841781
dgv437n67 CNV loss 20364138
dgv1216n106 CNV deletion 24896259

Relevant External Links for DYX1C1-CCPG1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DYX1C1-CCPG1 Gene

Disorders for DYX1C1-CCPG1 Gene

Relevant External Links for DYX1C1-CCPG1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for DYX1C1-CCPG1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DYX1C1-CCPG1 Gene

Publications for DYX1C1-CCPG1 Gene

  1. Expression of conjoined genes: another mechanism for gene regulation in eukaryotes. (PMID: 20967262) Prakash T. … Taylor T.D. (PLoS ONE 2010) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for DYX1C1-CCPG1 Gene

Sources for DYX1C1-CCPG1 Gene

Loading form....