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Aliases for DYX1C1-CCPG1 Gene

Subcategory (RNA class) for DYX1C1-CCPG1 Gene

ncRNA

Quality Score for this RNA gene is

3

Aliases for DYX1C1-CCPG1 Gene

  • DYX1C1-CCPG1 Readthrough (NMD Candidate) 2 3 5

External Ids for DYX1C1-CCPG1 Gene

Previous GeneCards Identifiers for DYX1C1-CCPG1 Gene

  • GC15U901336
  • GC15M055669
  • GC15M055652

Summaries for DYX1C1-CCPG1 Gene

Entrez Gene Summary for DYX1C1-CCPG1 Gene

  • This locus represents naturally occurring read-through transcription between the neighboring dyslexia susceptibility 1 candidate 1 (DYX1C1) and cell cycle progression 1 (CCPG1) genes on chromosome 15. The read-through transcript is a candidate for nonsense-mediated mRNA decay (NMD), and is thus unlikely to produce a protein product. [provided by RefSeq, Mar 2011]

GeneCards Summary for DYX1C1-CCPG1 Gene

DYX1C1-CCPG1 (DYX1C1-CCPG1 Readthrough (NMD Candidate)) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DYX1C1-CCPG1 Gene

Genomics for DYX1C1-CCPG1 Gene

Regulatory Elements for DYX1C1-CCPG1 Gene

Enhancers for DYX1C1-CCPG1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around DYX1C1-CCPG1 on UCSC Golden Path with GeneCards custom track

Promoters for DYX1C1-CCPG1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for DYX1C1-CCPG1 Gene

Chromosome:
15
Start:
55,355,223 bp from pter
End:
55,498,584 bp from pter
Size:
143,362 bases
Orientation:
Minus strand

Genomic View for DYX1C1-CCPG1 Gene

Genes around DYX1C1-CCPG1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DYX1C1-CCPG1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DYX1C1-CCPG1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DYX1C1-CCPG1 Gene

Proteins for DYX1C1-CCPG1 Gene

Post-translational modifications for DYX1C1-CCPG1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DYX1C1-CCPG1 Gene

Domains & Families for DYX1C1-CCPG1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DYX1C1-CCPG1 Gene

Function for DYX1C1-CCPG1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DYX1C1-CCPG1 Gene

Localization for DYX1C1-CCPG1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DYX1C1-CCPG1 Gene

Pathways & Interactions for DYX1C1-CCPG1 Gene

SuperPathways for DYX1C1-CCPG1 Gene

No Data Available

Interacting Proteins for DYX1C1-CCPG1 Gene

Gene Ontology (GO) - Biological Process for DYX1C1-CCPG1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DYX1C1-CCPG1 Gene

Drugs & Compounds for DYX1C1-CCPG1 Gene

No Compound Related Data Available

Transcripts for DYX1C1-CCPG1 Gene

mRNA/cDNA for DYX1C1-CCPG1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DYX1C1-CCPG1 Gene

No ASD Table

Relevant External Links for DYX1C1-CCPG1 Gene

GeneLoc Exon Structure for
DYX1C1-CCPG1
ECgene alternative splicing isoforms for
DYX1C1-CCPG1

Expression for DYX1C1-CCPG1 Gene

mRNA expression in normal human tissues for DYX1C1-CCPG1 Gene

genes like me logo Genes that share expression patterns with DYX1C1-CCPG1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for DYX1C1-CCPG1 Gene

Orthologs for DYX1C1-CCPG1 Gene

Evolution for DYX1C1-CCPG1 Gene

ENSEMBL:
Gene Tree for DYX1C1-CCPG1 (if available)
TreeFam:
Gene Tree for DYX1C1-CCPG1 (if available)

No data available for Orthologs for DYX1C1-CCPG1 Gene

Paralogs for DYX1C1-CCPG1 Gene

No data available for Paralogs for DYX1C1-CCPG1 Gene

Variants for DYX1C1-CCPG1 Gene

Structural Variations from Database of Genomic Variants (DGV) for DYX1C1-CCPG1 Gene

Variant ID Type Subtype PubMed ID
dgv1216n106 CNV deletion 24896259
dgv437n67 CNV loss 20364138
dgv4544n54 CNV loss 21841781
dgv4545n54 CNV loss 21841781
dgv4546n54 CNV loss 21841781
dgv4547n54 CNV loss 21841781
esv2663013 CNV deletion 23128226
esv2749724 CNV deletion 23290073
esv2761899 CNV gain+loss 21179565
esv29128 CNV loss 19812545
esv3365892 CNV insertion 20981092
esv3373880 CNV insertion 20981092
esv3390087 CNV insertion 20981092
esv3552487 CNV deletion 23714750
esv3569598 CNV gain 25503493
esv3636557 CNV loss 21293372
esv3636558 CNV loss 21293372
esv3636560 CNV loss 21293372
esv3636562 CNV loss 21293372
esv3636564 CNV loss 21293372
esv3636565 CNV loss 21293372
esv3892697 CNV loss 25118596
esv9731 CNV loss 19470904
nsv1043789 CNV gain 25217958
nsv1113713 CNV deletion 24896259
nsv1542 CNV insertion 18451855
nsv475201 CNV novel sequence insertion 20440878
nsv520799 CNV loss 19592680
nsv569523 CNV gain 21841781
nsv569530 CNV loss 21841781
nsv569539 CNV loss 21841781
nsv817693 CNV loss 17921354
nsv833016 CNV gain 17160897
nsv951964 CNV deletion 24416366
nsv984074 CNV duplication 23825009

Relevant External Links for DYX1C1-CCPG1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DYX1C1-CCPG1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for DYX1C1-CCPG1 Gene

Disorders for DYX1C1-CCPG1 Gene

Relevant External Links for DYX1C1-CCPG1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DYX1C1-CCPG1

No disorders were found for DYX1C1-CCPG1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DYX1C1-CCPG1 Gene

Publications for DYX1C1-CCPG1 Gene

  1. Expression of conjoined genes: another mechanism for gene regulation in eukaryotes. (PMID: 20967262) Prakash T. … Taylor T.D. (PLoS ONE 2010) 3 65
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 65

Products for DYX1C1-CCPG1 Gene

Sources for DYX1C1-CCPG1 Gene

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