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Aliases & Descriptions for DYRK1A
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase , and/or 9 Nature :405,311-319 and CroW21)About This Section
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Aliases DYRK 2 , 3 DYRK1 2 EC 2.7.12.1 3 HP86 2 , 3 MNB 2 , 3 , 5 MNBH 2 , 3 , 5 OTTHUMP00000109090 2 hMNB 3
Descriptions Dual specificity YAK1-related kinase 2 , 3 MNB/DYRK protein kinase 2 Protein kinase minibrain homolog 2 , 3 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 2 dual-specificity tyrosine-Y-phosphorylation regulated kinase, EC 2.7.1 9 mnb protein kinase homolog hp86 2 serine/threonine kinase MNB 2 serine/threonine-specific protein kinase 2
Search outside databases for aliases for DYRK1A genePrevious GC identifers: GC21P035317 GC21P037659 GC21P037712 GC21P037660
Summaries for DYRK1A (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for DYRK1A : This gene encodes a member of the Dual-specificity tyrosine phosphorylation-regulated kinase (DYRK)family. This member contains a nuclear targeting signal sequence, a protein kinase domain, aleucine zipper motif, and a highly conservative 13-consecutive-histidine repeat. It catalyzes itsautophosphorylation on serine/threonine and tyrosine residues. It may play a significant role in asignaling pathway regulating cell proliferation and may be involved in brain development. Thisgene is a homolog of Drosophila mnb (minibrain) gene and rat Dyrk gene. It is localized in theDown syndrome critical region of chromosome 21, and is considered to be a strong candidate genefor learning defects associated with Down syndrome. Alternative splicing of this gene generatesseveral transcript variants differing from each other either in the 5' UTR or in the 3'coding region. These variants encode at least five different isoforms. [provided by RefSeq] UniProtKB/Swiss-Prot: DYR1A_HUMAN, Q13627 Function : May play a role in a signaling pathway regulating nuclear functions of cellproliferation. Phosphorylates serine, threonine and tyrosine residues in its sequence and inexogenous substrates
Gene Wiki entry for DYRK1A
Genomic Location for DYRK1A
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences , Whole Chromsome Sequence According to
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Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 21q22.13 Ensembl cytogenetic band: 21q22.13 HGNC cytogenetic band: 21q22.13 Nature(405: 311-319) cytogenetic band: 21q22.13 DYRK1A Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
GC21P037661:
GeneLoc
Nature :405,311-319
Start:
37,661,729 bp from pter
24,367,732 bp from centromere
End:
37,809,550 bp from pter
24,464,002 bp from centromere
Size:
147,822 bases
96,271 bases
Orientation:
plus strand
plus strand
RefSeq DNA sequence: NC_000021.7 NT_011512.10 Proteins for DYRK1A
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: DYR1A_HUMAN, Q13627 (See
protein sequence )Recommended Name: Dual specificity tyrosine-phosphorylation-regulated kinase 1A Size : 763 amino acids; 85584 Da
Subunit : Interacts RAD54L2/ARIP4 (By similarity). Interacts with RANBP9
Subcellular location : Nucleus speckle
Developmental stage : Expressed in the developing central nervous system
PDB structures from and Proteopedia : 2VX3 (3D)
 
Secondary accessions : O60769 Q92582 Q92810 Q9UNM5Alternative splicing : 5 isoforms : Q13627-1 Q13627-2 Q13627-3 Q13627-4 Q13627-5 (Additional isoforms seem to exist)
Post-translational modifications:
Autophosphorylated on tyrosine residues1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (5 alternative transcripts):
NP_001387.2 NP_567824.1 NP_569120.1 NP_569121.1 NP_569122.1 ENSEMBL proteins: ENSP00000381923 ENSP00000381932 ENSP00000342690 ENSP00000319032 ENSP00000381929 ENSP00000340373 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for DYRK1A: Assays for DYRK1A:
Protein
Domains/ Families for DYRK1A(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q13627 ProtoNet protein and cluster: Q13627
UniProtKB/Swiss-Prot: DYR1A_HUMAN, Q13627 Similarity : Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MNB/DYRKsubfamily Similarity : Contains 1 protein kinase domain
Gene Function for DYRK1A
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 5 ): NM_101395 Applied Biosystems Silencer ® siRNAs for DYRK1A Sigma-Aldrich siRNA and siRNA Panels for DYRK1A Sigma-Aldrich shRNA Panels and shRNA for DYRK1A Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 5 ): NM_001396                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 5 ): NM_001396                                  untagged cDNA clones in CMV expression vector (see all 5 ): NM_001396  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001396 UniProtKB/Swiss-Prot: DYR1A_HUMAN, Q13627 Function : May play a role in a signaling pathway regulating nuclear functions of cellproliferation. Phosphorylates serine, threonine and tyrosine residues in its sequence and inexogenous substrates Catalytic activity : ATP + a protein = ADP + a phosphoproteinEnzyme regulation : Inhibited by RANBP9Enzyme Number (IUBMB): EC 2.7.12.1
Genatlas biochemistry entry for DYRK1A :dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1,Drosophila minibrain homologDres27,mouse homolog ubiquitously expressed at low levels in embryo,expressed in adult centralnervous system -cortex,hippocampus,striatum and spinal cord) located in the Down syndrome criticalregion (DCR),involved in post-embryonic neurogenesis,putatively overexpressed in Down syndrome andinvolved in the learning defect and in hypotonia
8 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Dyrk1a) :5/6 Gene Ontology (GO) molecular function terms (links to tree view) (see all 6
):
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Pathways & Interactions for DYRK1A
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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3 Sigma-Aldrich "Your Favorite Gene" Pathways for DYRK1A (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for DYRK1A 5/44 Interacting proteins for DYRK1A (ENSP00000340373 3 Q13627 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 44
)About this table 3 Gene Ontology (GO) biological process terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0007399 nervous system development
TAS 8769099 GO:0018108 peptidyl-tyrosine phosphorylation
ISS -- GO:0046777 protein amino acid autophosphorylation
ISS --
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Drugs & Compounds for DYRK1A (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Sigma-Aldrich Small Molecules for DYRK1A:Inhibitor
Browse Tocris compounds for DYRK1A 7 Novoseek chemical compound relationships for DYRK1A gene
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Transcripts for DYRK1A(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 5 ): NM_101395 Sigma-Aldrich siRNA and siRNA Panels for DYRK1A Sigma-Aldrich shRNA Panels and shRNA for DYRK1A Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001396 NM_101395 NM_130436 NM_130437 NM_130438
REFSEQ mRNAs for DYRK1A gene (5 alternative transcripts): NM_001396.3 NM_101395.2 NM_130436.2 NM_130437.2 NM_130438.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001396 NM_101395 NM_130436 NM_130437 NM_130438
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 5 ): NM_001396                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 5 ): NM_001396                                  untagged cDNA clones in CMV expression vector (see all 5 ): NM_001396  
Additional cDNA sequence: AB015282.1 AB015283.1 AB015284.1 AF108830.1 AJ001870.1 AK301752.1 BC030515.1 BC045802.1 BC065184.1 D85759.1 D86550.1 U52373.1 U58496.1 Z25423.1
10 DOTS entries : DT.97806866 DT.100791954 DT.449194 DT.92438592 DT.121141919 DT.121141927 DT.92044861 DT.91741448 DT.92438591 DT.75101238
24/287 AceView cDNA sequences (see all 287
):Z45133 AI076027 AI627548 BE790930 BG165287 AI478511 BM553514 AU280024 BI753541 CA389685 AL046760 NM_001396 AI149373 AA687255 AB015283 AA831486 CN479966 AA866036 AL046742 AI174919 BF794263 BC065184 NM_101395 AB015282
highest scoring ESTs for DYRK1A :D86550 U52373 U58496 AA279906 AA306050 AA322447 AA331181 AA337593 AA342261 AA497079
Unigene Clusters for DYRK1A: Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A Hs.368240 [show with all ESTs ] , Hs.719269 [show with all ESTs ] Unigene Representative Sequences: XM_001721653 , NM_130436 GeneLoc Exon Structure 5/6 Alternative Splicing Database (ASD) splice patterns (SP) for DYRK1A (see all 6
) ExUns: 1 ^ 2a · 2b · 2c ^ 3 ^ 4a · 4b ^ 5a · 5b ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13a · 13b ^ 14 SP1 :           -                               SP2 :                   -                   -     SP3 :                                     -     SP4 :         -   -         -                       SP5 :         -   -   -       -                      
About this scheme ECgene alternative splicing isoforms for DYRK1A 6 Ensembl transcripts including schematic representations : ENST00000398950
ENST00000398960
ENST00000338785
ENST00000321219
ENST00000398956
ENST00000339659
Expression for DYRK1A
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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DYRK1A expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for DYRK1A 1 / 2 / 3
10 probe-sets matching DYRK1A gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: AGGGTGTTTTSOURCE GeneReport for Unigene clusters: Hs.368240 Hs.719269 Expression variation in blood from EXPOLDB for DYRK1A
UniProtKB/Swiss-Prot: DYR1A_HUMAN, Q13627 Tissue specificity : Ubiquitous. Highest levels in skeletal muscle, testis, fetal lung and fetalkidney
Orthologs for DYRK1A
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for DYRK1A gene from 5/13 species (see all 13
)
About this table Species with no ortholog for DYRK1A ENSEMBL Gene Tree for DYRK1A Paralogs for DYRK1A (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for DYRK1A gene DYRK1B 2
SNPs/Variants for DYRK1A (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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The following additional 279 SNP(s) have been
found in Applied Biosystems data source:(Click
for
Applied Biosystems TaqMan ® Genotyping Assay ) HapMap Linkage Disequilibrium images for DYRK1A (up to first 250kb)
Disorders & Mutations for DYRK1A
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 600855 UniProtKB/Swiss-Prot: DYR1A_HUMAN, Q13627
Overexpressed 1.5-fold in fetal Down syndrome brain
6 Novoseek disease relationships for DYRK1A gene
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
down syndrome
84.97
55
12618396 (4), 15694837 (3), 10812554 (3), 12814361 (2) (see all 26 )
mental retardation
72.41
7
15906374 (1), 16959772 (1), 9918863 (1), 11877424 (1) (see all 7 )
trisomy
48.25
7
11555628 (1), 16554754 (1), 19242551 (1)
memory impairment
44.90
4
17696169 (1), 17536841 (1)
neuropathology
40.26
1
12618396 (1)
alzheimers disease
26.93
3
18696092 (1), 16242644 (1), 17135279 (1)
About this table Human Gene Mutation Database : DYRK1A
Medical News for DYRK1A (Possibly Related Articles in
Doctor's Guide )
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--
Publications for DYRK1A (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/117 PubMed articles for DYRK1A gene (see all 117
): Isolation of human and murine homologues of the Drosophila minibrain gene: human homologue maps to 21q22.2 in the Down syndrome 'critical region'. (PubMed id 8975710) 1, 3, 4 Song W.J....Kurnit D.W. (1996) Human minibrain homologue (MNBH/DYRK1): characterization, alternative splicing, differential tissue expression, and overexpression in Down syndrome. (PubMed id 10329007) 1, 3, 4 Guimera J.... Pritchard M.A. (1999) Minibrain (MNBH) is a single copy gene mapping to human chromosome 21q22.2. (PubMed id 9284911) 1, 2, 3 Guimera J....Estivill X. (1997) Cloning of a human homolog of the Drosophila minibrain/rat Dyrk gene from 'the Down syndrome critical region' of chromosome 21. (PubMed id 8769099) 1, 3, 4 Shindoh N....Shimizu N. (1996) A human homologue of Drosophila minibrain (MNB) is expressed in the neuronal regions affected in Down syndrome and maps to the critical region. (PubMed id 8872470) 1, 3, 4 Guimera J.... Pritchard M.A. (1996) Gene identification in 1.6-Mb region of the Down syndrome region on chromosome 21. (PubMed id 9037601) 1, 3, 4 Ohira M....Ohki M. (1997) Proteomics analysis of protein kinases by target class-selective prefractionation and tandem mass spectrometry. (PubMed id 17192257) 3, 4 Wissing J.... Daub H. (2007) Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. (PubMed id 15592455) 3, 4 Rush J.... Comb M.J. (2005) Serine/threonine kinase Mirk/Dyrk1B is an inhibitor of epithelial cell migration and is negatively regulated by the Met adaptor Ran- binding protein M. (PubMed id 14500717) 3, 4 Zou Y.... Friedman E. (2003) Transcriptional map of the 2.5-Mb CBR-ERG region of chromosome 21 involved in Down syndrome. (PubMed id 9503011) 3, 4 Dahmane N.... Delabar J.-M. (1998)
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Genome Databases showing DYRK1A
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing DYRK1A
(According to HUGE )
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Specialized Databases showing DYRK1A (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for DYRK1A (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for DYRK1A:
Antibodies & Assays for DYRK1A  
Search Tocris compounds for DYRK1A
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009