Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

DYNLT1 Gene

protein-coding   GIFtS: 52
GCID: GC06M159057

dynein, light chain, Tctex-type 1

(Previous name: t-complex-associated-testis-expressed 1-like 1 )
(Previous symbol: TCTEL1)
 Explore 10 diseases affiliated with
DYNLT1 via our new
 Human Malady Compendium 
Biological research products
for DYNLT1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Dynein, Light Chain, Tctex-Type 11 2     Dynein Light Chain Tctex-Type 12
TCTEL11 2 3 5     Tctex-11
T-Complex-Associated-Testis-Expressed 1-Like 11 2     TCTEX-13
T-Complex Testis-Specific Protein 1 Homolog2 3     TCTEX13
CW-12     Protein CW-13

External Ids:    HGNC: 116971   Entrez Gene: 69932   Ensembl: ENSG000001464257   OMIM: 6015545   UniProtKB: P631723   

Export aliases for DYNLT1 gene to outside databases

Previous GC identifers: GC06M159028 GC06M158977 GC06M156528


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for DYNLT1:
Cytoplasmic dynein is the major motor protein complex responsible for minus-end, microtubule-based motile processes.
Each dynein complex consists of 2 heavy chains that have ATPase and motor activities, plus a group of accessory
polypeptides. TCTEX1 is a dynein light chain involved in cargo binding (Chuang et al., 2005 (PubMed
15992542)).(supplied by OMIM, Mar 2008)

UniProtKB/Swiss-Prot: DYLT1_HUMAN, P63172
Function: Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are
thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic
dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules.
Binds to transport cargos and is involved in apical cargo transport such as rhodopsin-bearing vesicles in polarized
epithelia. Is involved in intracellular targeting of D-type retrovirus gag polyproteins to the cytoplasmic assembly
site. May also be a accessory component of axonemal dynein
Function: Plays a role in neuronal morhpogenesis; the function is independent of cytoplasmic dynein and seems to be
coupled to regulation of the actin cytoskeleton by enhancing Rac1 activity. The function in neurogenesis may be
regulated by association with a G-protein beta-gamma dimer. May function as a receptor-independent activator of
heterotrimeric G-protein signaling; the activation appears to be independent of a nucleotide exchange. Plays a role in
regulating neurogenesis; inhibits the genesis of neurons from precursor cells during cortical development presumably
by antagonizing ARHGEF2. Involved in the regulation of mitotic spindle orientation (By similarity)

Gene Wiki entry for DYNLT1


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000006.11  NC_018917.1  NT_025741.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the DYNLT1 gene promoter:
         Elk-1   Nkx2-5   POU3F2 (N-Oct-5a)   POU3F2 (N-Oct-5b)   CUTL1   LCR-F1   POU3F2   MEF-2A   FAC1   aMEF-2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidDYNLT1 promoter sequence
   Search SABiosciences Chromatin IP Primers for DYNLT1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat DYNLT1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 6q25.2-q25.3   Ensembl cytogenetic band:  6q25.3   HGNC cytogenetic band: 6q25.2-q25.3

DYNLT1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
DYNLT1 gene location

GeneLoc information about chromosome 6         GeneLoc Exon Structure

GeneLoc location for GC06M159057:  view genomic region     (about GC identifiers)

Start:
159,057,506 bp from pter      End:
159,065,804 bp from pter
Size:
8,299 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: DYLT1_HUMAN, P63172 (See protein sequence)
Recommended Name: Dynein light chain Tctex-type 1  
Size: 113 amino acids; 12452 Da
Subunit: Homodimer (Probable). The cytoplasmic dynein 1 complex consists of two catalytic heavy chains (HCs) and a
number of non-catalytic subunits presented by intermediate chains (ICs), light intermediate chains (LICs) and light
chains (LCs); the composition seems to vary in respect to the IC, LIC and LC composition. The heavy chain homodimer
serves as a scaffold for the probable homodimeric assembly of the respective non-catalytic subunits. The ICs and LICs
bind directly to the HC dimer and the LCs assemble on the IC dimer. DYNLT1 and DYNLT3 compete for association with
dynein IC (DYNC1I1 or DYNC1I2). Self-associates. Interacts with DYNC1I1 and DYNC1I2. Interacts with RHO. Interacts
with DOC2A, DOC2B and SCN10A. Interacts with PVR. Interacts with SVIL isoform 2. Interacts with BMPR2. Interacts with
GNB1; the interaction occurs in presence of guanine nucleotide-binding protein G(T) subunit gamma; the interaction
diminishes the association of DYNLT1 with dynein IC (DYNC1I1 or DYNC1I2). Interacts with GNB2, GNB3 and GNB5; the
interactions occur in presence of guanine nucleotide-binding protein G(T) subunit gamma (By similarity). Interacts
with human papillomavirus 16 L2 protein; this interaction is essential for virus intracellular transport during entry
Subcellular location: Golgi apparatus (By similarity). Cytoplasm (By similarity). Cytoplasm, cytoskeleton, spindle (By
similarity). Note=Localizes to mitotic spindles (By similarity)
Secondary accessions: Q15763 Q5VTU4

Explore the universe of human proteins at neXtProt for DYNLT1: NX_P63172

Post-translational modifications:

  • Phosphorylated by BMPR2; the phosphorylation is abolished by BMPR2 mutations in exon 12 which lead to truncated forms
  • of BMPR2 and which are linked to primary pulmonary hypertension (PPH1) [MIM:178600]. The phosphorylation status is
    proposed to regulate the association with the cytoplasmic dynein complex and may have role in cytoplasmic dynein cargo
    release (By similarity)1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P63172

  • DYNLT1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_006510.1  
    ENSEMBL proteins: 
     ENSP00000356055   ENSP00000356056   ENSP00000356052  

    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    OriGene Purified Protein: DYNLT1
    OriGene Protein Over-expression Lysate: DYNLT1
    OriGene Custom Protein Services for DYNLT1 
    GenScript Custom Purified and Recombinant Proteins Services for DYNLT1
    Novus Biologicals DYNLT1 Proteins
    Novus Biologicals DYNLT1 Lysate
    Browse Sino Biological Recombinant Proteins
    ProSpec Recombinant Protein for DYNLT1
    Uscn Proteins for DYNLT1

    Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005794Golgi apparatus IEA--
    GO:0005819spindle IEA--
    GO:0005868cytoplasmic dynein complex ISS--
    GO:0005874microtubule IEA--


    DYNLT1 for ontologies           About GeneDecksing



    DYNLT1 Antibody Products: 
    EMD Millipore Mono- and Polyclonal Antibodies for the study of DYNLT1
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for DYNLT1 
    GenScript Custom Superior Antibodies Services for DYNLT1
    Search for Antibodies for DYNLT1 at Abcam  
    Uscn Antibodies for DYNLT1
    Search ThermoFisher Antibodies for DYNLT1

    Assay Products for DYNLT1: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for DYNLT1
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for DYNLT1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    DYNLT1 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR005334 Tctex

    Graphical View of Domain Structure for InterPro Entry P63172

    ProtoNet protein and cluster: P63172

    1 Blocks protein family: IPB005334 Tctex-1 family

    UniProtKB/Swiss-Prot: DYLT1_HUMAN, P63172
    Similarity: Belongs to the dynein light chain Tctex-type family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: DYLT1_HUMAN, P63172
    Function: Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are
    thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic
    dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules.
    Binds to transport cargos and is involved in apical cargo transport such as rhodopsin-bearing vesicles in polarized
    epithelia. Is involved in intracellular targeting of D-type retrovirus gag polyproteins to the cytoplasmic assembly
    site. May also be a accessory component of axonemal dynein
    Function: Plays a role in neuronal morhpogenesis; the function is independent of cytoplasmic dynein and seems to be
    coupled to regulation of the actin cytoskeleton by enhancing Rac1 activity. The function in neurogenesis may be
    regulated by association with a G-protein beta-gamma dimer. May function as a receptor-independent activator of
    heterotrimeric G-protein signaling; the activation appears to be independent of a nucleotide exchange. Plays a role in
    regulating neurogenesis; inhibits the genesis of neurons from precursor cells during cortical development presumably
    by antagonizing ARHGEF2. Involved in the regulation of mitotic spindle orientation (By similarity)

    miRNA
    Products:
        
    OriGene 3'-UTR Clone: DYNLT1
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat DYNLT1
    8/15 QIAGEN miScript miRNA Assays for microRNAs that regulate DYNLT1 (see all 15):
    hsa-miR-374b* hsa-miR-142-5p hsa-miR-3688-3p hsa-miR-29c hsa-miR-29a hsa-miR-3617 hsa-miR-3647-3p hsa-miR-659
    SwitchGear 3'UTR luciferase reporter plasmidDYNLT1 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for DYNLT1
    OriGene shRNA RFP: DYNLT1
    OriGene siRNA: DYNLT1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat DYNLT1

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for DYNLT1

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for DYNLT1 (see all 2)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for DYNLT1
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: DYNLT1 (NM_006519)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for DYNLT1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat DYNLT1 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for DYNLT1
    Search LifeMap BioReagents cell lines for DYNLT1

    In Situ Assay
    Products:
       

     
    Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for DYNLT1

    Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003774motor activity IEA--
    GO:0005515protein binding IPI10644691
    GO:0042802identical protein binding IPI17965411


    DYNLT1 for ontologies           About GeneDecksing



    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Cell cycle_Spindle assembly and chromosome separation
    Cell cycle_Spindle assembly and chromosome separation1.00
    Cell cycle Spindle assembly and chromosome separation0.94
    2Lissencephaly gene (LIS1) in neuronal migration and development
    Lissencephaly gene (LIS1) in neuronal migration and development1.00
    3Neurotrophic factor-mediated Trk receptor signaling
    Neurotrophic factor-mediated Trk receptor signaling1.00
    4Regulation of degradation of wt-CFTR
    Regulation of degradation of deltaF508 CFTR in CF0.59
    5Cytoskeleton remodeling Neurofilaments
    Cytoplasmic microtubules0.32

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    2 EMD Millipore Pathways for DYNLT1
        Cell cycle Spindle assembly and chromosome separation
    Cytoplasmic microtubules


    2 GeneGo (Thomson Reuters) Pathways for DYNLT1
        Cell cycle Spindle assembly and chromosome separation
    Regulation of degradation of deltaF508 CFTR in CF

    2 BioSystems Pathways for DYNLT1 
        Neurotrophic factor-mediated Trk receptor signaling
    Lissencephaly gene (LIS1) in neuronal migration and development



    DYNLT1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for DYNLT1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/86 Interacting proteins for DYNLT1 (P631721, 3 ENSP000003560564) via UniProtKB, MINT, STRING, and/or I2D (see all 86)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    HSPB9Q9BQS61, 3, ENSP000003471784EBI-1176455,EBI-1176448 I2D: score=2 STRING: ENSP00000347178
    NME1-NME2P223923I2D: score=5 
    NME2P223923I2D: score=5 
    DOC2AQ141833, ENSP000003400174I2D: score=1 STRING: ENSP00000340017
    SOD1P004413, ENSP000002701424I2D: score=1 STRING: ENSP00000270142
    About this table

    Gene Ontology (GO): 5/10 biological process terms (GO ID links to tree view) (see all 10):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000132establishment of mitotic spindle orientation ISS--
    GO:0007067mitosis IEA--
    GO:0008277regulation of G-protein coupled receptor protein signaling pathway ISS--
    GO:0019060intracellular transport of viral proteins in host cell IMP18647839
    GO:0032314regulation of Rac GTPase activity ----


    DYNLT1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for DYNLT1
    Search CenterWatch for drugs/clinical trials and news about DYNLT1 / DYLT1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for DYNLT1 gene: 
    NM_006519.2  

    Unigene Cluster for DYNLT1:

    Dynein, light chain, Tctex-type 1
    Hs.445999  [show with all ESTs]
    Unigene Representative Sequence: AK026669
    3 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000367088 ENST00000367089(uc003qrn.2) ENST00000367085

    miRNA
    Products:
         
    OriGene 3'-UTR Clone: DYNLT1
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat DYNLT1
    8/15 QIAGEN miScript miRNA Assays for microRNAs that regulate DYNLT1 (see all 15):
    hsa-miR-374b* hsa-miR-142-5p hsa-miR-3688-3p hsa-miR-29c hsa-miR-29a hsa-miR-3617 hsa-miR-3647-3p hsa-miR-659
    SwitchGear 3'UTR luciferase reporter plasmidDYNLT1 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for DYNLT1
    OriGene shRNA RFP: DYNLT1
    OriGene siRNA: DYNLT1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat DYNLT1
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for DYNLT1 (see all 2)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for DYNLT1
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: DYNLT1 (NM_006519)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for DYNLT1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat DYNLT1 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for DYNLT1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat DYNLT1
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat DYNLT1
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat DYNLT1

    Additional cDNA sequence: 

    AK026669.1 AK315601.1 BC029412.1 BC105588.1 CR456931.1 D50663.1 EU862237.1 U56255.1 

    14 DOTS entries:

    DT.446239  DT.91712992  DT.320052  DT.92439422  DT.95221196  DT.121311728  DT.100824618  DT.121311801 
    DT.91655389  DT.100824616  DT.40110972  DT.91678998  DT.95221269  DT.92439405 

    24/420 AceView cDNA sequences (see all 420):

    BU902675 AA329809 CB269610 AI984152 CB118733 AA142898 AA187770 AF052495 
    BX096970 AA748161 BM314199 AI186060 BU685942 BU608340 AI275672 AA099901 
    BM979828 CA449176 U56255 AA044202 BG750548 BU631343 AI143771 CB164687 

    GeneLoc Exon Structure

    5 Alternative Splicing Database (ASD) splice patterns (SP) for DYNLT1    About this scheme

    ExUns: 1a · 1b ^ 2a · 2b ^ 3a · 3b · 3c ^ 4a · 4b ^ 5a · 5b · 5c
    SP1:              -                 -     -                                 
    SP2:              -     -           -     -                                 
    SP3:                                -     -     -                           
    SP4:              -                                                         
    SP5:                                                                        


    ECgene alternative splicing isoforms for DYNLT1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    DYNLT1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: AATTCAGTGA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See DYNLT1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for DYNLT1

    SOURCE GeneReport for Unigene cluster: Hs.445999

    UniProtKB/Swiss-Prot: DYLT1_HUMAN, P63172
    Tissue specificity: Expressed in heart, placenta, skeletal muscle kidney, pancreas, spleen, prostate, testis, ovary,
    ileum and colon. Expressed in lung endothelial and smooth muscle cells (at protein level)

        SABiosciences Custom PCR Arrays for DYNLT1
    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for DYNLT1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat DYNLT1
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat DYNLT1
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat DYNLT1
    In Situ
    Assay Products:
     

     
    Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for DYNLT1

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for DYNLT1 gene from 6/26 species (see all 26)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves DYNLT11 dynein, light chain, Tctex-type 1 82.89(n)
    90.27(a)
      421660  XM_419699.3  XP_419699.1 
    lizard
    (Anolis carolinensis)
    Reptilia DYNLT16
    --
    88(a)
    1 ↔ 1
    1(212775208-212784402)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.257782 Xenopus laevis transcribed sequence with moderate similarity more 80(n)    BJ033560.1 
    zebrafish
    (Danio rerio)
    Actinopterygii si:dkey-148f10.41 si:dkey-148f10.4 69.97(n)
    72.07(a)
      100318879  XM_002665184.1  XP_002665230.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Dlc90F1 Dynein light chain 90F 67.61(n)
    72.64(a)
      42199  NM_058008.3  NP_477356.1 
    worm
    (Caenorhabditis elegans)
    Secernentea dylt-16
    dylt-36
    Protein DYLT-3
    36(a)
    17(a)
    possible ortholog
    possible ortholog
    I(7300060-7300913)
    II(8181334-8182257)


    ENSEMBL Gene Tree for DYNLT1 (if available)
    TreeFam Gene Tree for DYNLT1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for DYNLT1 gene
    DYNLT32  
    3 SIMAP similar genes for DYNLT1 using alignment to 3 protein entries:     DYLT1_HUMAN (see all proteins):
    TCTE1L    DYNLT3    TCTEX1D2

    DYNLT1 for paralogs           About GeneDecksing


    2 Pseudogenes.org Pseudogenes for DYNLT1
    PGOHUM00000237223 PGOHUM00000245851


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/214 NCBI SNPs in DYNLT1 are shown (see all 214    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 6 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs624329341,2
    C,--159057049(+) CATGGA/GGAGGA 1 -- int12Minor allele frequency- G:0.11NA 122
    rs1421973951,2
    C,--159057081(+) TTGGT-/TGTGTAT 1 -- int10--------
    rs132164221,2
    C,F,H,--159057085(+) GTTGTA/GTATAT 1 -- int112Minor allele frequency- G:0.21NS EA 1978
    rs1507974901,2
    --159057174(+) CAGTGA/GCGGGA 1 -- int10--------
    rs1138467001,2
    --159057202(+) GGCTCG/ACTACA 1 -- int11Minor allele frequency- A:0.50CSA 2
    rs715511361,2
    C,--159057273(+) CAGGCA/GCCCGC 1 -- int12Minor allele frequency- G:0.25NA 4
    rs1851965131,2
    --159057301(+) TTTTGG/TTATTT 1 -- int10--------
    rs1119521251,2
    C,--159057320(+) GACGGA/GGTTTC 1 -- int12Minor allele frequency- G:0.33NA CSA 3
    rs1885161741,2
    --159057340(+) GACAGA/GATGGT 1 -- int10--------
    rs730162391,2
    C,F,--159057419(+) ACTGCG/ACCTGG 1 -- int14Minor allele frequency- A:0.17NA CSA 126

    HapMap Linkage Disequilibrium report for DYNLT1 (159057506 - 159065804 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for DYNLT1: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing DYNLT1
    DNA2.0 Custom Variant and Variant Library Synthesis for DYNLT1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    DYNLT1 for disorders           About GeneDecksing

    OMIM gene information: 601554    OMIM disorders: --

    10 diseases for DYNLT1:    About MalaCards
    glaucomatocyclitic crisis    primary pulmonary hypertension    pulmonary hypertension    herpes simplex
    leiomyosarcoma    hypertension    leiomyoma    malaria
    prostatitis    neuronitis


    Export disorders for DYNLT1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for DYNLT1 gene, integrated from 9 sources (see all 56):
    (articles sorted by number of sources associating them with DYNLT1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Cloning, expression, and mapping of TCTEL1, a putative human homologue of murine Tcte1, to 6q. (PubMed id 8646886)1, 2, 3 Watanabe T.K.... Hirai Y. (1996)
    2. Functional interaction between BMPR-II and Tctex-1, a light chain of Dynein, is isoform-specific and disrupted by mutations underlying primary pulmonary hypertension. (PubMed id 14583445)1, 2, 9 Machado R.D....Trembath R.C. (2003)
    3. Receptor (CD155)-dependent endocytosis of poliovirus and retrograde axonal transport of the endosome. (PubMed id 15194795)1, 2, 9 Ohka S....Nomoto A. (2004)
    4. Identification of the dynein light chains required for human papillomavirus infection. (PubMed id 21166973)1, 2 Schneider M.A.... Lambert C. (2011)
    5. D-retrovirus morphogenetic switch driven by the targeting signal accessibility to Tctex-1 of dynein. (PubMed id 18647839)1, 2 Vlach J....Ruml T. (2008)
    6. Interaction of the DYNLT (TCTEX1/RP3) light chains and the intermediate chains reveals novel intersubunit regulation during assembly of the dynein complex. (PubMed id 17965411)1, 2 Lo K.W.... Pfister K.K. (2007)
    7. Cytoplasmic dynein nomenclature. (PubMed id 16260502)1, 3 Pfister K.K....Vallee R.B. (2005)
    8. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    9. Interaction of the poliovirus receptor CD155 with the dynein light chain Tctex-1 and its implication for poliovirus pathogenesis. (PubMed id 11751937)1, 2 Mueller S.... Wimmer E. (2002)
    10. The dynein light chain Tctex-1 has a dynein-independent role in actin remodeling during neurite outgrowth. (PubMed id 15992542)1, 9 Chuang J.Z....Sung C.H. (2005)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 6993 HGNC: 11697 AceView: TCTEL1 Ensembl:ENSG00000146425 euGenes: HUgn6993
    ECgene: DYNLT1 H-InvDB: DYNLT1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for DYNLT1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for DYNLT1 gene:
    Search GeneIP for patents involving DYNLT1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     Browse Small Molecules at EMD Millipore
     Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
     EMD Millipore Mono- and Polyclonal Antibodies for the study of DYNLT1
     Browse for Gene Knock-down Tools from EMD Millipore
     Browse Kits and Assays available from EMD Millipore
     Browse Purified and Recombinant Proteins at EMD Millipore
     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for DYNLT1  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for DYNLT1   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for DYNLT1  
     OriGene Protein Over-expression Lysate for DYNLT1   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for DYNLT1   OriGene 3'-UTR Clone for DYNLT1  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for DYNLT1   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for DYNLT1  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     OriGene Purified Protein for DYNLT1   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for DYNLT1   OriGene Custom Protein Services for DYNLT1  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat DYNLT1
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing DYNLT1
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat DYNLT1
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat DYNLT1
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat DYNLT1
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat DYNLT1
     GenScript Custom Purified and Recombinant Proteins Services for DYNLT1 GenScript cDNA clones with any tag delivered in your preferred vector for DYNLT1
     GenScript Custom Assay Services for DYNLT1 GenScript Custom Superior Antibodies Services for DYNLT1
     GenScript Custom overexpressing Cell Line Services for DYNLT1 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in DYNLT1 promoter
     Search Chromatin IP Primers for DYNLT1
     RT2 qPCR Primer Assay in human, mouse, rat DYNLT1
     GNC Network for DYNLT1
     SABiosciences Custom PCR Arrays for DYNLT1
     Search Tocris compounds for DYNLT1
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     DYNLT1 proteins
     DYNLT1 lysates
     Search for Antibodies for DYNLT1 at Abcam
     See all of Abcam's Antibodies, Kits and Proteins for DYNLT1
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Recombinant Protein for DYNLT1




     DYNLT1 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for DYNLT1
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for DYNLT1
     SwitchGear 3'UTR luciferase reporter plasmids for DYNLT1
     SwitchGear Promoter luciferase reporter plasmids for DYNLT1
     Search ThermoFisher Antibodies for DYNLT1
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat DYNLT1
           
    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 27 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      DYNLT1 gene at Home site.
    hostname: 356980-web2.xennexinc.com index build: 100 solr: 1.4