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Aliases for DUXAP10 Gene

Aliases for DUXAP10 Gene

  • Double Homeobox A Pseudogene 10 2 3

External Ids for DUXAP10 Gene

Previous GeneCards Identifiers for DUXAP10 Gene

  • GC14U900509
  • GC14P018761
  • GC14P018732
  • GC14P019691
  • GC22M000021

Summaries for DUXAP10 Gene

Entrez Gene Summary for DUXAP10 Gene

  • Homeobox genes encode DNA-binding proteins, many of which are thought to be involved in early embryonic development. Homeobox genes encode a DNA-binding domain of 60 to 63 amino acids referred to as the homeodomain. This pseudogene is a member of the DUXA homeobox gene family. [provided by RefSeq, Jul 2008]

GeneCards Summary for DUXAP10 Gene

DUXAP10 (Double Homeobox A Pseudogene 10) is a Pseudogene.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DUXAP10 Gene

Genomics for DUXAP10 Gene

Regulatory Elements for DUXAP10 Gene

Enhancers for DUXAP10 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F019344 0.7 Ensembl 0.4 -8.2 -8162 2.4 DUXAP10 LOC105378174
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around DUXAP10 on UCSC Golden Path with GeneCards custom track

Promoters for DUXAP10 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001787589 274 2000

Genomic Location for DUXAP10 Gene

Chromosome:
14
Start:
19,294,785 bp from pter
End:
19,337,674 bp from pter
Size:
42,890 bases
Orientation:
Minus strand

Genomic View for DUXAP10 Gene

Genes around DUXAP10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DUXAP10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DUXAP10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DUXAP10 Gene

Proteins for DUXAP10 Gene

Post-translational modifications for DUXAP10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DUXAP10 Gene

Domains & Families for DUXAP10 Gene

Gene Families for DUXAP10 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DUXAP10: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DUXAP10 Gene

Function for DUXAP10 Gene

Phenotypes for DUXAP10 Gene

GenomeRNAi human phenotypes for DUXAP10:
genes like me logo Genes that share phenotypes with DUXAP10: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DUXAP10 Gene

Localization for DUXAP10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DUXAP10 Gene

Pathways & Interactions for DUXAP10 Gene

SuperPathways for DUXAP10 Gene

No Data Available

Interacting Proteins for DUXAP10 Gene

Gene Ontology (GO) - Biological Process for DUXAP10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DUXAP10 Gene

Transcripts for DUXAP10 Gene

mRNA/cDNA for DUXAP10 Gene

(1) REFSEQ mRNAs :
(8) Additional mRNA sequences :

Unigene Clusters for DUXAP10 Gene

Double homeobox A pseudogene 10:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DUXAP10 Gene

No ASD Table

Relevant External Links for DUXAP10 Gene

GeneLoc Exon Structure for
DUXAP10
ECgene alternative splicing isoforms for
DUXAP10

Expression for DUXAP10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DUXAP10 Gene

NURSA nuclear receptor signaling pathways regulating expression of DUXAP10 Gene:

DUXAP10

SOURCE GeneReport for Unigene cluster for DUXAP10 Gene:

Hs.744284
genes like me logo Genes that share expression patterns with DUXAP10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for DUXAP10 Gene

Orthologs for DUXAP10 Gene

No data available for Orthologs and Evolution for DUXAP10 Gene

Paralogs for DUXAP10 Gene

No data available for Paralogs for DUXAP10 Gene

Variants for DUXAP10 Gene

Sequence variations from dbSNP and Humsavar for DUXAP10 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs10154504 -- 19,308,778(+) AATCT(C/G)CGTAC intron-variant
rs1058364 -- 19,302,418(+) TCCGG(A/G)TCGGT intron-variant, reference, missense
rs111239613 -- 19,298,540(-) TGACT(C/G)CTTTT intron-variant
rs111546540 -- 19,310,173(-) ATTAG(-/A)AAAAT intron-variant
rs111787886 -- 19,312,657(-) TATTT(C/T)TCAAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DUXAP10 Gene

Variant ID Type Subtype PubMed ID
dgv1158e59 CNV duplication 20981092
dgv1160e59 CNV duplication 20981092
dgv1161e59 CNV duplication 20981092
dgv1162e59 CNV duplication 20981092
dgv1163e59 CNV duplication 20981092
dgv1174e59 CNV duplication 20981092
dgv1175e59 CNV duplication 20981092
dgv1176e59 CNV duplication 20981092
dgv1177e59 CNV duplication 20981092
dgv1178e59 CNV duplication 20981092
dgv1749n100 CNV gain 25217958
dgv1750n100 CNV gain+loss 25217958
dgv1751n100 CNV loss 25217958
dgv1752n100 CNV gain 25217958
dgv1753n100 CNV gain 25217958
dgv1754n100 CNV gain+loss 25217958
dgv1755n100 CNV gain 25217958
dgv1756n100 CNV loss 25217958
dgv1757n100 CNV gain 25217958
dgv1758n100 CNV loss 25217958
dgv1759n100 CNV gain 25217958
dgv1760n100 CNV gain+loss 25217958
dgv1761n100 CNV gain+loss 25217958
dgv1762n100 CNV loss 25217958
dgv1763n100 CNV gain 25217958
dgv1764n100 CNV loss 25217958
dgv1765n100 CNV gain+loss 25217958
dgv1766n100 CNV gain 25217958
dgv1767n100 CNV loss 25217958
dgv1768n100 CNV gain 25217958
dgv1769n100 CNV gain 25217958
dgv1770n100 CNV gain+loss 25217958
dgv1771n100 CNV loss 25217958
dgv30n82 CNV duplication 23825009
dgv33e203 CNV gain+loss 21179565
dgv3489n54 CNV gain 21841781
dgv3494n54 CNV loss 21841781
dgv3511n54 CNV loss 21841781
dgv360n67 CNV gain 20364138
dgv45e180 CNV loss 20482838
esv1005804 OTHER inversion 20482838
esv23873 CNV gain+loss 19812545
esv2748433 CNV deletion 23290073
esv2759971 CNV gain+loss 17122850
esv3323825 CNV duplication 20981092
esv3335978 CNV duplication 20981092
esv3344057 CNV duplication 20981092
esv33527 CNV gain+loss 17666407
esv3353086 CNV duplication 20981092
esv3353275 CNV duplication 20981092
esv3376454 CNV duplication 20981092
esv3383725 CNV duplication 20981092
esv3393707 CNV duplication 20981092
esv3413501 CNV duplication 20981092
esv3428491 CNV duplication 20981092
esv3437684 CNV duplication 20981092
esv3442251 CNV duplication 20981092
esv3445630 CNV duplication 20981092
esv3448269 CNV duplication 20981092
esv3584743 CNV gain 24956385
esv3892461 CNV gain 25118596
esv3892464 CNV gain 25118596
nsv1037353 CNV gain 25217958
nsv1048150 CNV gain+loss 25217958
nsv1048393 CNV gain+loss 25217958
nsv1075859 CNV duplication 25765185
nsv1075860 CNV duplication 25765185
nsv1075861 CNV duplication 25765185
nsv1076404 CNV duplication 25765185
nsv1076405 CNV duplication 25765185
nsv1110856 OTHER inversion 24896259
nsv1115454 CNV duplication 24896259
nsv1115455 CNV duplication 24896259
nsv1118529 CNV duplication 24896259
nsv1124680 CNV duplication 24896259
nsv1132378 CNV duplication 24896259
nsv1132379 CNV duplication 24896259
nsv1132380 CNV duplication 24896259
nsv1141240 CNV duplication 24896259
nsv1147625 CNV duplication 26484159
nsv1148767 CNV duplication 26484159
nsv1148918 CNV duplication 26484159
nsv1150751 CNV duplication 26484159
nsv1151924 CNV duplication 26484159
nsv1160151 CNV duplication 26073780
nsv1160152 CNV duplication 26073780
nsv428292 CNV gain+loss 18775914
nsv433422 CNV gain 18776910
nsv436829 CNV insertion 17901297
nsv563705 CNV loss 21841781
nsv563706 CNV loss 21841781
nsv563709 CNV loss 21841781
nsv563717 CNV loss 21841781
nsv563718 CNV loss 21841781
nsv563719 CNV loss 21841781
nsv563720 CNV loss 21841781
nsv7248 OTHER inversion 18451855
nsv819711 CNV loss 19587683
nsv832729 CNV gain+loss 17160897
nsv832730 CNV gain+loss 17160897
nsv832731 CNV gain 17160897
nsv9117 CNV gain+loss 18304495
nsv951950 CNV duplication 24416366
nsv951955 CNV duplication 24416366
nsv974301 CNV duplication 23825009
nsv974302 CNV duplication 23825009
nsv974303 CNV duplication 23825009
nsv976307 CNV duplication 23825009
nsv976390 CNV duplication 23825009
nsv977434 CNV duplication 23825009
nsv983792 CNV duplication 23825009
nsv983882 CNV duplication 23825009

Relevant External Links for DUXAP10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DUXAP10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DUXAP10 Gene

Disorders for DUXAP10 Gene

Relevant External Links for DUXAP10

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DUXAP10

No disorders were found for DUXAP10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DUXAP10 Gene

Publications for DUXAP10 Gene

  1. Annotation, nomenclature and evolution of four novel homeobox genes expressed in the human germ line. (PMID: 17005330) Booth H.A. … Holland P.W.H. (Gene 2007) 3 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for DUXAP10 Gene

Sources for DUXAP10 Gene

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