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Aliases for DTX2P1-UPK3BP1-PMS2P11 Gene

Aliases for DTX2P1-UPK3BP1-PMS2P11 Gene

  • DTX2P1-UPK3BP1-PMS2P11 Readthrough Transcribed Pseudogene 2 3
  • DTX2P1-UPK3BP1-PMS2P11 Readthrough (Non-Protein Coding) 2 3
  • Postmeiotic Segregation Increased 2-Like 11 Pseudogene 3
  • Postmeiotic Segregation Increased 2 Pseudogene 11 3
  • Yeast Mismatch Repair Gene PMS1 Homologue 3
  • Deltex Homolog 2 Pseudogene 3
  • PMS2-DTX2-UPK3B Pseudogene 3
  • PMS2L11 3
  • PMS2P11 3
  • PMSR6 3

External Ids for DTX2P1-UPK3BP1-PMS2P11 Gene

Previous GeneCards Identifiers for DTX2P1-UPK3BP1-PMS2P11 Gene

  • GC07P076611
  • GC07P076612
  • GC07P076614

Summaries for DTX2P1-UPK3BP1-PMS2P11 Gene

GeneCards Summary for DTX2P1-UPK3BP1-PMS2P11 Gene

DTX2P1-UPK3BP1-PMS2P11 (DTX2P1-UPK3BP1-PMS2P11 Readthrough Transcribed Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DTX2P1-UPK3BP1-PMS2P11 Gene

Genomics for DTX2P1-UPK3BP1-PMS2P11 Gene

Genomic Location for DTX2P1-UPK3BP1-PMS2P11 Gene

Start:
76,980,822 bp from pter
End:
77,043,775 bp from pter
Size:
62,954 bases
Orientation:
Plus strand

Genomic View for DTX2P1-UPK3BP1-PMS2P11 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DTX2P1-UPK3BP1-PMS2P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DTX2P1-UPK3BP1-PMS2P11 Gene

No data available for Regulatory Elements for DTX2P1-UPK3BP1-PMS2P11 Gene

Proteins for DTX2P1-UPK3BP1-PMS2P11 Gene

Post-translational modifications for DTX2P1-UPK3BP1-PMS2P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DTX2P1-UPK3BP1-PMS2P11 Gene

Domains for DTX2P1-UPK3BP1-PMS2P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DTX2P1-UPK3BP1-PMS2P11 Gene

Function for DTX2P1-UPK3BP1-PMS2P11 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DTX2P1-UPK3BP1-PMS2P11 Gene

Localization for DTX2P1-UPK3BP1-PMS2P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DTX2P1-UPK3BP1-PMS2P11 Gene

Pathways for DTX2P1-UPK3BP1-PMS2P11 Gene

SuperPathways for DTX2P1-UPK3BP1-PMS2P11 Gene

No Data Available

Interacting Proteins for DTX2P1-UPK3BP1-PMS2P11 Gene

Gene Ontology (GO) - Biological Process for DTX2P1-UPK3BP1-PMS2P11 Gene

None

No data available for Pathways by source for DTX2P1-UPK3BP1-PMS2P11 Gene

Transcripts for DTX2P1-UPK3BP1-PMS2P11 Gene

mRNA/cDNA for DTX2P1-UPK3BP1-PMS2P11 Gene

(3) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DTX2P1-UPK3BP1-PMS2P11 Gene

DTX2P1-UPK3BP1-PMS2P11 readthrough transcribed pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DTX2P1-UPK3BP1-PMS2P11 Gene

No ASD Table

Relevant External Links for DTX2P1-UPK3BP1-PMS2P11 Gene

GeneLoc Exon Structure for
DTX2P1-UPK3BP1-PMS2P11
ECgene alternative splicing isoforms for
DTX2P1-UPK3BP1-PMS2P11

Expression for DTX2P1-UPK3BP1-PMS2P11 Gene

mRNA expression in normal human tissues for DTX2P1-UPK3BP1-PMS2P11 Gene

SOURCE GeneReport for Unigene cluster for DTX2P1-UPK3BP1-PMS2P11 Gene Hs.675888

genes like me logo Genes that share expressions with DTX2P1-UPK3BP1-PMS2P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for DTX2P1-UPK3BP1-PMS2P11 Gene

Orthologs for DTX2P1-UPK3BP1-PMS2P11 Gene

Evolution for DTX2P1-UPK3BP1-PMS2P11 Gene

ENSEMBL:
Gene Tree for DTX2P1-UPK3BP1-PMS2P11 (if available)
TreeFam:
Gene Tree for DTX2P1-UPK3BP1-PMS2P11 (if available)

No data available for Orthologs for DTX2P1-UPK3BP1-PMS2P11 Gene

Paralogs for DTX2P1-UPK3BP1-PMS2P11 Gene

No data available for Paralogs for DTX2P1-UPK3BP1-PMS2P11 Gene

Variants for DTX2P1-UPK3BP1-PMS2P11 Gene

Sequence variations from dbSNP and Humsavar for DTX2P1-UPK3BP1-PMS2P11 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs1004563 -- 76,990,381(-) CGAGG(G/T)CAGGC intron-variant
rs1140985 -- 77,018,980(+) cttcc(G/T)gtaca nc-transcript-variant
rs1619624 -- 76,999,669(-) CACAC(A/G)CGCAC intron-variant
rs1638152 -- 77,000,309(-) TCGCT(C/T)CTAGA nc-transcript-variant
rs1799117 -- 76,999,668(+) CGTGC(A/G)TGTGT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DTX2P1-UPK3BP1-PMS2P11 Gene

Variant ID Type Subtype PubMed ID
essv14753 CNV CNV 17122850
dgv2104e1 CNV Complex 17122850
esv2422494 CNV Duplication 17116639
nsv428174 CNV Gain 18775914
dgv232e55 CNV Gain 17911159
dgv2106e1 CNV Complex 17122850
dgv233e55 CNV Loss 17911159
dgv2107e1 CNV Complex 17122850
nsv517634 CNV Gain+Loss 19592680
dgv7327n71 CNV Gain 21882294
dgv1218e199 CNV Deletion 23128226
nsv888391 CNV Loss 21882294
esv2734687 CNV Deletion 23290073
dgv121n16 CNV Insertion 17901297
dgv7331n71 CNV Loss 21882294
dgv63n64 CNV Loss 17921354
esv23975 CNV Gain+Loss 19812545
dgv22n31 CNV Duplication 19718026
dgv7332n71 CNV Gain 21882294
nsv888440 CNV Gain 21882294
dgv822n27 CNV Loss 19166990
dgv823n27 CNV Gain 19166990
nsv470321 CNV Gain 18288195
dgv2108e1 CNV Complex 17122850
dgv7335n71 CNV Gain 21882294
dgv7339n71 CNV Gain+Loss 21882294
dgv7342n71 CNV Gain 21882294
dgv7343n71 CNV Loss 21882294
nsv824178 CNV Gain 20364138
nsv526097 CNV Gain 19592680
dgv7347n71 CNV Gain 21882294
esv33336 CNV Gain 17666407
nsv818523 CNV Gain 17921354
dgv2109e1 CNV Complex 17122850
nsv888507 CNV Gain 21882294
nsv831038 CNV Loss 17160897
esv2741833 CNV Deletion 23290073
esv5776 CNV Loss 19470904
esv2734689 CNV Deletion 23290073
esv2742165 CNV Deletion 23290073
esv2734690 CNV Deletion 23290073
esv6344 CNV Loss 19470904
esv5293 CNV Deletion 18987735
esv2734691 CNV Deletion 23290073
nsv5801 CNV Loss 18451855
esv34102 CNV Loss 18971310
nsv8164 CNV Gain+Loss 18304495
nsv820936 CNV Deletion 20802225

Relevant External Links for DTX2P1-UPK3BP1-PMS2P11 Gene

HapMap Linkage Disequilibrium report
DTX2P1-UPK3BP1-PMS2P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for DTX2P1-UPK3BP1-PMS2P11 Gene

Disorders for DTX2P1-UPK3BP1-PMS2P11 Gene

No disorders were found for DTX2P1-UPK3BP1-PMS2P11 Gene.

No data available for UniProtKB/Swiss-Prot for DTX2P1-UPK3BP1-PMS2P11 Gene

Publications for DTX2P1-UPK3BP1-PMS2P11 Gene

  1. Mutagenesis of yeast MW104-1B strain has identified the uncharacterized PMS6 DNA mismatch repair gene locus and additional alleles of existing PMS1, PMS2 and MSH2 genes. (PMID: 7521009) Jeyaprakash A. … Fogel S. (Mutat. Res. 1994) 23
  2. Cloning, characterization and chromosomal assignment of the human genes homologous to yeast PMS1, a member of mismatch repair genes. (PMID: 7980603) Horii A. … Nakamura Y. (Biochem. Biophys. Res. Commun. 1994) 3
  3. Genomic organization of the human PMS2 gene family. (PMID: 8586419) Nicolaides N.C. … Kinzler K.W. (Genomics 1995) 3
  4. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3
  5. PMS2-related genes flank the rearrangement breakpoints associated with Williams syndrome and other diseases on human chromosome 7. (PMID: 9344666) Osborne L.R. … Scherer S.W. (Genomics 1997) 3

Products for DTX2P1-UPK3BP1-PMS2P11 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate DTX2P1-UPK3BP1-PMS2P11
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for DTX2P1-UPK3BP1-PMS2P11
    • Block miRNA regulation of DTX2P1-UPK3BP1-PMS2P11 using miScript Target Protectors

    Sources for DTX2P1-UPK3BP1-PMS2P11 Gene

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