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Aliases for DTX2P1-UPK3BP1-PMS2P11 Gene

Aliases for DTX2P1-UPK3BP1-PMS2P11 Gene

  • DTX2P1-UPK3BP1-PMS2P11 Readthrough Transcribed Pseudogene 2 3
  • DTX2P1-UPK3BP1-PMS2P11 Readthrough (Non-Protein Coding) 2 3
  • Postmeiotic Segregation Increased 2-Like 11 Pseudogene 3
  • Postmeiotic Segregation Increased 2 Pseudogene 11 3
  • Yeast Mismatch Repair Gene PMS1 Homologue 3
  • Deltex Homolog 2 Pseudogene 3
  • PMS2-DTX2-UPK3B Pseudogene 3
  • PMS2L11 3
  • PMS2P11 3
  • PMSR6 3

External Ids for DTX2P1-UPK3BP1-PMS2P11 Gene

Previous GeneCards Identifiers for DTX2P1-UPK3BP1-PMS2P11 Gene

  • GC07P076611
  • GC07P076612
  • GC07P076614

Summaries for DTX2P1-UPK3BP1-PMS2P11 Gene

GeneCards Summary for DTX2P1-UPK3BP1-PMS2P11 Gene

DTX2P1-UPK3BP1-PMS2P11 (DTX2P1-UPK3BP1-PMS2P11 Readthrough Transcribed Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DTX2P1-UPK3BP1-PMS2P11 Gene

Genomics for DTX2P1-UPK3BP1-PMS2P11 Gene

Genomic Location for DTX2P1-UPK3BP1-PMS2P11 Gene

Start:
76,980,822 bp from pter
End:
77,043,775 bp from pter
Size:
62,954 bases
Orientation:
Plus strand

Genomic View for DTX2P1-UPK3BP1-PMS2P11 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DTX2P1-UPK3BP1-PMS2P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DTX2P1-UPK3BP1-PMS2P11 Gene

No data available for Regulatory Elements for DTX2P1-UPK3BP1-PMS2P11 Gene

Proteins for DTX2P1-UPK3BP1-PMS2P11 Gene

Post-translational modifications for DTX2P1-UPK3BP1-PMS2P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DTX2P1-UPK3BP1-PMS2P11 Gene

Domains for DTX2P1-UPK3BP1-PMS2P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DTX2P1-UPK3BP1-PMS2P11 Gene

Function for DTX2P1-UPK3BP1-PMS2P11 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DTX2P1-UPK3BP1-PMS2P11 Gene

Localization for DTX2P1-UPK3BP1-PMS2P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DTX2P1-UPK3BP1-PMS2P11 Gene

Pathways for DTX2P1-UPK3BP1-PMS2P11 Gene

SuperPathways for DTX2P1-UPK3BP1-PMS2P11 Gene

No Data Available

Interacting Proteins for DTX2P1-UPK3BP1-PMS2P11 Gene

Gene Ontology (GO) - Biological Process for DTX2P1-UPK3BP1-PMS2P11 Gene

None

No data available for Pathways by source for DTX2P1-UPK3BP1-PMS2P11 Gene

Transcripts for DTX2P1-UPK3BP1-PMS2P11 Gene

mRNA/cDNA for DTX2P1-UPK3BP1-PMS2P11 Gene

(3) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DTX2P1-UPK3BP1-PMS2P11 Gene

DTX2P1-UPK3BP1-PMS2P11 readthrough transcribed pseudogene:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate DTX2P1-UPK3BP1-PMS2P11
    • Block miRNA regulation of DTX2P1-UPK3BP1-PMS2P11 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for DTX2P1-UPK3BP1-PMS2P11

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for DTX2P1-UPK3BP1-PMS2P11 Gene

    No ASD Table

    Relevant External Links for DTX2P1-UPK3BP1-PMS2P11 Gene

    GeneLoc Exon Structure for
    DTX2P1-UPK3BP1-PMS2P11
    ECgene alternative splicing isoforms for
    DTX2P1-UPK3BP1-PMS2P11

    Expression for DTX2P1-UPK3BP1-PMS2P11 Gene

    mRNA expression in normal human tissues for DTX2P1-UPK3BP1-PMS2P11 Gene

    SOURCE GeneReport for Unigene cluster for DTX2P1-UPK3BP1-PMS2P11 Gene Hs.675888

    genes like me logo Genes that share expressions with DTX2P1-UPK3BP1-PMS2P11: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for DTX2P1-UPK3BP1-PMS2P11 Gene

    Orthologs for DTX2P1-UPK3BP1-PMS2P11 Gene

    Evolution for DTX2P1-UPK3BP1-PMS2P11 Gene

    ENSEMBL:
    Gene Tree for DTX2P1-UPK3BP1-PMS2P11 (if available)
    TreeFam:
    Gene Tree for DTX2P1-UPK3BP1-PMS2P11 (if available)

    No data available for Orthologs for DTX2P1-UPK3BP1-PMS2P11 Gene

    Paralogs for DTX2P1-UPK3BP1-PMS2P11 Gene

    No data available for Paralogs for DTX2P1-UPK3BP1-PMS2P11 Gene

    Variants for DTX2P1-UPK3BP1-PMS2P11 Gene

    Sequence variations from dbSNP and Humsavar for DTX2P1-UPK3BP1-PMS2P11 Gene

    SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
    rs1004563 -- 76,990,381(-) CGAGG(G/T)CAGGC intron-variant
    rs1140985 -- 77,018,980(+) cttcc(G/T)gtaca nc-transcript-variant
    rs1619624 -- 76,999,669(-) CACAC(A/G)CGCAC intron-variant
    rs1638152 -- 77,000,309(-) TCGCT(C/T)CTAGA nc-transcript-variant
    rs1799117 -- 76,999,668(+) CGTGC(A/G)TGTGT intron-variant

    Structural Variations from Database of Genomic Variants (DGV) for DTX2P1-UPK3BP1-PMS2P11 Gene

    Variant ID Type Subtype PubMed ID
    essv14753 CNV CNV 17122850
    dgv2104e1 CNV Complex 17122850
    esv2422494 CNV Duplication 17116639
    nsv428174 CNV Gain 18775914
    dgv232e55 CNV Gain 17911159
    dgv2106e1 CNV Complex 17122850
    dgv233e55 CNV Loss 17911159
    dgv2107e1 CNV Complex 17122850
    nsv517634 CNV Gain+Loss 19592680
    dgv7327n71 CNV Gain 21882294
    dgv1218e199 CNV Deletion 23128226
    nsv888391 CNV Loss 21882294
    esv2734687 CNV Deletion 23290073
    dgv121n16 CNV Insertion 17901297
    dgv7331n71 CNV Loss 21882294
    dgv63n64 CNV Loss 17921354
    esv23975 CNV Gain+Loss 19812545
    dgv22n31 CNV Duplication 19718026
    dgv7332n71 CNV Gain 21882294
    nsv888440 CNV Gain 21882294
    dgv822n27 CNV Loss 19166990
    dgv823n27 CNV Gain 19166990
    nsv470321 CNV Gain 18288195
    dgv2108e1 CNV Complex 17122850
    dgv7335n71 CNV Gain 21882294
    dgv7339n71 CNV Gain+Loss 21882294
    dgv7342n71 CNV Gain 21882294
    dgv7343n71 CNV Loss 21882294
    nsv824178 CNV Gain 20364138
    nsv526097 CNV Gain 19592680
    dgv7347n71 CNV Gain 21882294
    esv33336 CNV Gain 17666407
    nsv818523 CNV Gain 17921354
    dgv2109e1 CNV Complex 17122850
    nsv888507 CNV Gain 21882294
    nsv831038 CNV Loss 17160897
    esv2741833 CNV Deletion 23290073
    esv5776 CNV Loss 19470904
    esv2734689 CNV Deletion 23290073
    esv2742165 CNV Deletion 23290073
    esv2734690 CNV Deletion 23290073
    esv6344 CNV Loss 19470904
    esv5293 CNV Deletion 18987735
    esv2734691 CNV Deletion 23290073
    nsv5801 CNV Loss 18451855
    esv34102 CNV Loss 18971310
    nsv8164 CNV Gain+Loss 18304495
    nsv820936 CNV Deletion 20802225

    Relevant External Links for DTX2P1-UPK3BP1-PMS2P11 Gene

    HapMap Linkage Disequilibrium report
    DTX2P1-UPK3BP1-PMS2P11

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for DTX2P1-UPK3BP1-PMS2P11 Gene

    Disorders for DTX2P1-UPK3BP1-PMS2P11 Gene

    No disorders were found for DTX2P1-UPK3BP1-PMS2P11 Gene.

    No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for DTX2P1-UPK3BP1-PMS2P11 Gene

    Publications for DTX2P1-UPK3BP1-PMS2P11 Gene

    1. Mutagenesis of yeast MW104-1B strain has identified the uncharacterized PMS6 DNA mismatch repair gene locus and additional alleles of existing PMS1, PMS2 and MSH2 genes. (PMID: 7521009) Jeyaprakash A. … Fogel S. (Mutat. Res. 1994) 23
    2. Cloning, characterization and chromosomal assignment of the human genes homologous to yeast PMS1, a member of mismatch repair genes. (PMID: 7980603) Horii A. … Nakamura Y. (Biochem. Biophys. Res. Commun. 1994) 3
    3. Genomic organization of the human PMS2 gene family. (PMID: 8586419) Nicolaides N.C. … Kinzler K.W. (Genomics 1995) 3
    4. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3
    5. PMS2-related genes flank the rearrangement breakpoints associated with Williams syndrome and other diseases on human chromosome 7. (PMID: 9344666) Osborne L.R. … Scherer S.W. (Genomics 1997) 3

    Products for DTX2P1-UPK3BP1-PMS2P11 Gene

    Sources for DTX2P1-UPK3BP1-PMS2P11 Gene

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