Free for academic non-profit institutions. Other users need a Commercial license

Aliases for DSCR9 Gene

Subcategory (RNA class) for DSCR9 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for DSCR9 Gene

  • Down Syndrome Critical Region 9 (Non-Protein Coding) 2 3
  • Down Syndrome Critical Region Gene 9 (Non-Protein Coding) 3
  • Non-Protein Coding RNA 38 2
  • NCRNA00038 3

External Ids for DSCR9 Gene

Previous GeneCards Identifiers for DSCR9 Gene

  • GC21P035170
  • GC21P037513
  • GC21P037502
  • GC21P038580
  • GC21P024056

Summaries for DSCR9 Gene

GeneCards Summary for DSCR9 Gene

DSCR9 (Down Syndrome Critical Region 9 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DSCR9 Gene

Genomics for DSCR9 Gene

Regulatory Elements for DSCR9 Gene

Transcription factor binding sites by QIAGEN in the DSCR9 gene promoter:

Genomic Location for DSCR9 Gene

Start:
37,208,503 bp from pter
End:
37,221,736 bp from pter
Size:
13,234 bases
Orientation:
Plus strand

Genomic View for DSCR9 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DSCR9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DSCR9 Gene

Proteins for DSCR9 Gene

  • Protein details for DSCR9 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P59020-DSCR9_HUMAN
    Recommended name:
    Down syndrome critical region protein 9
    Protein Accession:
    P59020
    Secondary Accessions:
    • B2R8P8

    Protein attributes for DSCR9 Gene

    Size:
    149 amino acids
    Molecular mass:
    16743 Da
    Quaternary structure:
    No Data Available

neXtProt entry for DSCR9 Gene

Proteomics data for DSCR9 Gene at MOPED

Post-translational modifications for DSCR9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DSCR9 Gene

Domains for DSCR9 Gene

Gene Families for DSCR9 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for DSCR9 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for DSCR9 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DSCR9: view

No data available for UniProtKB/Swiss-Prot for DSCR9 Gene

Function for DSCR9 Gene

Gene Ontology (GO) - Molecular Function for DSCR9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
genes like me logo Genes that share ontologies with DSCR9: view

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for DSCR9

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DSCR9 Gene

Localization for DSCR9 Gene

Gene Ontology (GO) - Cellular Components for DSCR9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005575 cellular_component ND --
genes like me logo Genes that share ontologies with DSCR9: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for DSCR9 Gene

Pathways for DSCR9 Gene

SuperPathways for DSCR9 Gene

No Data Available

Interacting Proteins for DSCR9 Gene

Gene Ontology (GO) - Biological Process for DSCR9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with DSCR9: view

No data available for Pathways by source for DSCR9 Gene

Transcripts for DSCR9 Gene

Unigene Clusters for DSCR9 Gene

Down syndrome critical region gene 9 (non-protein coding):
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for DSCR9

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for DSCR9 Gene

No ASD Table

Relevant External Links for DSCR9 Gene

GeneLoc Exon Structure for
DSCR9
ECgene alternative splicing isoforms for
DSCR9

Expression for DSCR9 Gene

mRNA expression in normal human tissues for DSCR9 Gene

Protein differential expression in normal tissues for DSCR9 Gene

This gene is overexpressed in Breast (69.0).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for DSCR9 Gene

SOURCE GeneReport for Unigene cluster for DSCR9 Gene Hs.505159

mRNA Expression by UniProt/SwissProt for DSCR9 Gene

P59020-DSCR9_HUMAN
Tissue specificity: Testis specific.
genes like me logo Genes that share expressions with DSCR9: view

Expression partners for DSCR9 Gene

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA differential expression in normal tissues for DSCR9 Gene

Orthologs for DSCR9 Gene

Evolution for DSCR9 Gene

ENSEMBL:
Gene Tree for DSCR9 (if available)
TreeFam:
Gene Tree for DSCR9 (if available)

No data available for Orthologs for DSCR9 Gene

Paralogs for DSCR9 Gene

No data available for Paralogs for DSCR9 Gene

Variants for DSCR9 Gene

Sequence variations from dbSNP and Humsavar for DSCR9 Gene

SNP ID Clin Chr 21 pos Sequence Context AA Info Type MAF
rs13864 - 37,221,319(-) GCATA(A/C)GCTGG nc-transcript-variant
rs714960 -- 37,206,605(-) ATCCA(A/G)TCACC upstream-variant-2KB
rs1888464 - 37,221,160(+) GAGCG(G/T)CGATT nc-transcript-variant
rs2246285 -- 37,210,130(+) aaatc(A/C/G/T)gggct intron-variant
rs2409877 -- 37,214,546(+) ttttt(G/T)tgtgt intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DSCR9 Gene

Variant ID Type Subtype PubMed ID
dgv70n68 CNV Gain 17160897
nsv3512 CNV Loss 18451855

Relevant External Links for DSCR9 Gene

HapMap Linkage Disequilibrium report
DSCR9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for DSCR9 Gene

Disorders for DSCR9 Gene

Relevant External Links for DSCR9

Human Genome Epidemiology (HuGE) Navigator
DSCR9

No disorders were found for DSCR9 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships and Genatlas for DSCR9 Gene

Publications for DSCR9 Gene

  1. Identification of two novel primate-specific genes in DSCR. (PMID: 12168953) Takamatsu K. … Takeda T. (DNA Res. 2002) 2 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3
  4. Digital quantification of human eye color highlights genetic association of three new loci. (PMID: 20463881) Liu F. … Kayser M. (PLoS Genet. 2010) 3
  5. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3

Products for DSCR9 Gene

Sources for DSCR9 Gene

Back to Top

Content