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Aliases for DSCR4-IT1 Gene

Subcategory (RNA class) for DSCR4-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DSCR4-IT1 Gene

  • DSCR4 Intronic Transcript 1 2 3 5
  • DSCR4 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for DSCR4-IT1 Gene

Previous GeneCards Identifiers for DSCR4-IT1 Gene

  • GC00U933253
  • GC21M039379

Summaries for DSCR4-IT1 Gene

GeneCards Summary for DSCR4-IT1 Gene

DSCR4-IT1 (DSCR4 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DSCR4-IT1 Gene

Genomics for DSCR4-IT1 Gene

Regulatory Elements for DSCR4-IT1 Gene

Enhancers for DSCR4-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21F038983 2.2 VISTA FANTOM5 Ensembl ENCODE 16.2 -980.3 -980272 14.2 PKNOX1 ARNT MLX SIN3A ARID4B YBX1 FEZF1 ZNF2 ZNF302 FOS RNF6P1 MYL6P2 DSCR10 LOC100288590 DSCR4 DSCR4-IT1 HMGN1 DSCR8 ETS2 ENSG00000235888
GH21F038906 1.8 FANTOM5 Ensembl ENCODE 16.2 -900.8 -900813 9.7 HDGF PKNOX1 CREB3L1 MLX SIN3A YBX1 YY1 ZNF302 ZNF207 ZNF548 BRWD1 HMGN1 RNF6P1 MYL6P2 DSCR4 DSCR10 LOC100288590 DSCR4-IT1 DSCR8 LINC00114
GH21F038733 1.2 Ensembl ENCODE 16.2 -724.7 -724654 3.5 TBL1XR1 WRNIP1 ARID4B ZNF2 RAD21 RARA RFX5 ZNF143 RCOR1 ZNF391 DSCR4 LOC100288590 DSCR10 RNF6P1 DSCR4-IT1 MYL6P2 DSCR8 ERG RPSAP64 KCNJ6
GH21F037071 1.1 ENCODE 16.2 +937.5 937475 4.2 HDGF PKNOX1 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF416 TTC3 PIGP ENSG00000242553 MORC3 SETD4 MRPL20P1 RN7SL678P DSCR4-IT1 ENSG00000224790 TTC3-AS1
GH21F038058 0.9 FANTOM5 0.2 -47.8 -47763 0.4 CBX3 PKNOX1 TBL1XR1 ARNT PTRF ZBTB2 CEBPB NCOA1 MEF2D SMARCA4 DSCR4 DSCR4-IT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DSCR4-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for DSCR4-IT1 Gene

Chromosome:
21
Start:
38,006,544 bp from pter
End:
38,010,618 bp from pter
Size:
4,075 bases
Orientation:
Minus strand

Genomic View for DSCR4-IT1 Gene

Genes around DSCR4-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DSCR4-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DSCR4-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for DSCR4-IT1 Gene

Proteins for DSCR4-IT1 Gene

Post-translational modifications for DSCR4-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DSCR4-IT1 Gene

Domains & Families for DSCR4-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DSCR4-IT1 Gene

Function for DSCR4-IT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DSCR4-IT1 Gene

Localization for DSCR4-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DSCR4-IT1 Gene

Pathways & Interactions for DSCR4-IT1 Gene

SuperPathways for DSCR4-IT1 Gene

No Data Available

Interacting Proteins for DSCR4-IT1 Gene

Gene Ontology (GO) - Biological Process for DSCR4-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DSCR4-IT1 Gene

Transcripts for DSCR4-IT1 Gene

mRNA/cDNA for DSCR4-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DSCR4-IT1 Gene

No ASD Table

Relevant External Links for DSCR4-IT1 Gene

GeneLoc Exon Structure for
DSCR4-IT1
ECgene alternative splicing isoforms for
DSCR4-IT1

Expression for DSCR4-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DSCR4-IT1 Gene

genes like me logo Genes that share expression patterns with DSCR4-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for DSCR4-IT1 Gene

Orthologs for DSCR4-IT1 Gene

Evolution for DSCR4-IT1 Gene

ENSEMBL:
Gene Tree for DSCR4-IT1 (if available)
TreeFam:
Gene Tree for DSCR4-IT1 (if available)

No data available for Orthologs for DSCR4-IT1 Gene

Paralogs for DSCR4-IT1 Gene

No data available for Paralogs for DSCR4-IT1 Gene

Variants for DSCR4-IT1 Gene

Relevant External Links for DSCR4-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DSCR4-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DSCR4-IT1 Gene

Disorders for DSCR4-IT1 Gene

No disorders were found for DSCR4-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for DSCR4-IT1 Gene

Publications for DSCR4-IT1 Gene

  1. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington J.J. … Ducar M. (Nat. Biotechnol. 2001) 3 64

Products for DSCR4-IT1 Gene

Sources for DSCR4-IT1 Gene

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