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Aliases for DSCR10 Gene

Subcategory (RNA class) for DSCR10 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for DSCR10 Gene

  • Down Syndrome Critical Region 10 (Non-Protein Coding) 2 3
  • Down Syndrome Critical Region Gene 10 2

External Ids for DSCR10 Gene

ORGUL Members for DSCR10 Gene

Summaries for DSCR10 Gene

GeneCards Summary for DSCR10 Gene

DSCR10 (Down Syndrome Critical Region 10 (Non-Protein Coding)) is an RNA Gene, and belongs to the lncRNA class. Diseases associated with DSCR10 include down syndrome.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DSCR10 Gene

Genomics for DSCR10 Gene

Genomic Location for DSCR10 Gene

Start:
38,206,156 bp from pter
End:
38,208,644 bp from pter
Size:
2,489 bases
Orientation:
Plus strand

Genomic View for DSCR10 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DSCR10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DSCR10 Gene

Regulatory Elements for DSCR10 Gene

Proteins for DSCR10 Gene

  • Protein details for DSCR10 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P59022-DSC10_HUMAN
    Recommended name:
    Down syndrome critical region protein 10
    Protein Accession:
    P59022
    Secondary Accessions:
    • Q52LN2

    Protein attributes for DSCR10 Gene

    Size:
    87 amino acids
    Molecular mass:
    9286 Da
    Quaternary structure:
    No Data Available

neXtProt entry for DSCR10 Gene

Proteomics data for DSCR10 Gene at MOPED

Post-translational modifications for DSCR10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DSCR10 Gene

Domains for DSCR10 Gene

Gene Families for DSCR10 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for DSCR10 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for DSCR10 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DSCR10: view

No data available for UniProtKB/Swiss-Prot for DSCR10 Gene

Function for DSCR10 Gene

Gene Ontology (GO) - Molecular Function for DSCR10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
genes like me logo Genes that share ontologies with DSCR10: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DSCR10 Gene

Localization for DSCR10 Gene

Gene Ontology (GO) - Cellular Components for DSCR10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005575 cellular_component ND --
genes like me logo Genes that share ontologies with DSCR10: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for DSCR10 Gene

Pathways for DSCR10 Gene

SuperPathways for DSCR10 Gene

No Data Available

Interacting Proteins for DSCR10 Gene

Gene Ontology (GO) - Biological Process for DSCR10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with DSCR10: view

No data available for Pathways by source for DSCR10 Gene

Transcripts for DSCR10 Gene

mRNA/cDNA for DSCR10 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DSCR10 Gene

Down syndrome critical region gene 10 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DSCR10 Gene

No ASD Table

Relevant External Links for DSCR10 Gene

GeneLoc Exon Structure for
DSCR10
ECgene alternative splicing isoforms for
DSCR10

Expression for DSCR10 Gene

mRNA expression in normal human tissues for DSCR10 Gene

mRNA differential expression in normal tissues according to GTEx for DSCR10 Gene

This gene is overexpressed in Testis (51.6).

SOURCE GeneReport for Unigene cluster for DSCR10 Gene Hs.147695

mRNA Expression by UniProt/SwissProt for DSCR10 Gene

P59022-DSC10_HUMAN
Tissue specificity: Expressed in placenta and testis.
genes like me logo Genes that share expressions with DSCR10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and Protein expression for DSCR10 Gene

Orthologs for DSCR10 Gene

Evolution for DSCR10 Gene

ENSEMBL:
Gene Tree for DSCR10 (if available)
TreeFam:
Gene Tree for DSCR10 (if available)

No data available for Orthologs for DSCR10 Gene

Paralogs for DSCR10 Gene

No data available for Paralogs for DSCR10 Gene

Variants for DSCR10 Gene

Sequence variations from dbSNP and Humsavar for DSCR10 Gene

SNP ID Clin Chr 21 pos Sequence Context AA Info Type MAF
rs915514 -- 38,205,156(+) GAGAT(C/G)TTTGA upstream-variant-2KB
rs1573271 -- 38,206,127(+) CGGAG(C/T)GTTCT upstream-variant-2KB
rs2226367 -- 38,208,918(+) TAAAT(A/G)AATGT downstream-variant-500B
rs6517451 -- 38,209,042(+) AGGAC(A/G)AAAAC downstream-variant-500B
rs7276468 -- 38,205,714(+) AAAGC(C/T)GCCTG upstream-variant-2KB

Relevant External Links for DSCR10 Gene

HapMap Linkage Disequilibrium report
DSCR10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for DSCR10 Gene

Disorders for DSCR10 Gene

(1) MalaCards Diseases for DSCR10 Gene

Search for DSCR10 Gene in MalaCards »

Relevant External Links for DSCR10

Genetic Association Database (GAD)
DSCR10
Human Genome Epidemiology (HuGE) Navigator
DSCR10
genes like me logo Genes that share disorders with DSCR10: view

No data available for UniProtKB/Swiss-Prot for DSCR10 Gene

Publications for DSCR10 Gene

  1. Identification of two novel primate-specific genes in DSCR. (PMID: 12168953) Takamatsu K. … Takeda T. (DNA Res. 2002) 2 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Common polymorphisms in ITGA2, PON1 and THBS2 are associated with coronary atherosclerosis in a candidate gene association study of the Chinese Han population. (PMID: 20485444) Wang Y. … Huang W. (J. Hum. Genet. 2010) 3 48
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for DSCR10 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate DSCR10
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for DSCR10
    • Block miRNA regulation of DSCR10 using miScript Target Protectors

    Sources for DSCR10 Gene

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