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Aliases for DRC3 Gene

Aliases for DRC3 Gene

  • Dynein Regulatory Complex Subunit 3 2 3 5
  • Leucine-Rich Repeat-Containing Protein 48 3 4
  • Leucine Rich Repeat Containing 48 2 3
  • LRRC48 3 4
  • CFAP134 3

External Ids for DRC3 Gene

Previous HGNC Symbols for DRC3 Gene

  • LRRC48

Summaries for DRC3 Gene

GeneCards Summary for DRC3 Gene

DRC3 (Dynein Regulatory Complex Subunit 3) is a Protein Coding gene. Diseases associated with DRC3 include Primary Ciliary Dyskinesia. An important paralog of this gene is LRRC9.

UniProtKB/Swiss-Prot for DRC3 Gene

  • Key component of the nexin-dynein regulatory complex (N-DRC), a key regulator of ciliary motility.

Gene Wiki entry for DRC3 Gene

No data available for Entrez Gene Summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DRC3 Gene

Genomics for DRC3 Gene

Regulatory Elements for DRC3 Gene

Enhancers for DRC3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F018025 0.9 Ensembl ENCODE 11.9 +53.3 53298 2.0 CTCF PKNOX1 ZNF266 FEZF1 ZKSCAN1 ZNF664 ZNF316 SCRT2 NFE2 ZNF600 TOM1L2 DRC3 ATPAF2 ENSG00000280198 PIR37928
GH17F017970 0.7 FANTOM5 ENCODE 11.3 -0.7 -717 3.1 HDGF PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF143 ZNF207 FOXO3B SMCR8 FAM106A DRG2 TOM1L2 ZNF286B USP32P2 ENSG00000264885 DRC3 ENSG00000250111
GH17F017868 0.8 Ensembl ENCODE 9.6 -103.4 -103381 2.6 BCOR CTCF ZMYM3 NFXL1 ZIC2 RAD21 NFE2 PRDM10 ZNF652 EGR2 SREBF1 MIR33B RAI1 DRC3 GC17M017867 PIR35691 PIR37368
GH17F017689 1.1 FANTOM5 Ensembl ENCODE 5.6 -276.2 -276163 14.6 HDGF PKNOX1 WRNIP1 ZFP64 ARID4B SIN3A YBX1 FEZF1 DMAP1 ZNF2 ZNF286B SREBF1 ENSG00000264885 USP32P2 LOC100419436 DRG2 MIR33B FLCN SMCR5 UPF3AP1
GH17F017817 0.6 ENCODE 4.5 -149.8 -149792 10.7 HDGF PKNOX1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF143 FOS TOM1L2 LOC100419436 DRG2 FAM106A ENSG00000264885 ENSG00000197815 FOXO3B ENSG00000265511 SMCR8 ACTG1P24
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around DRC3 on UCSC Golden Path with GeneCards custom track

Promoters for DRC3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001342096 -480 2601 HDGF PKNOX1 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF143 ZNF207 FOS

Genomic Location for DRC3 Gene

Chromosome:
17
Start:
17,972,780 bp from pter
End:
18,016,889 bp from pter
Size:
44,110 bases
Orientation:
Plus strand

Genomic View for DRC3 Gene

Genes around DRC3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DRC3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DRC3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DRC3 Gene

Proteins for DRC3 Gene

  • Protein details for DRC3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H069-DRC3_HUMAN
    Recommended name:
    Dynein regulatory complex subunit 3
    Protein Accession:
    Q9H069
    Secondary Accessions:
    • A8KAE6
    • Q86SF9
    • Q86W73
    • Q8IWG0

    Protein attributes for DRC3 Gene

    Size:
    523 amino acids
    Molecular mass:
    61054 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for DRC3 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for DRC3 Gene

Post-translational modifications for DRC3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DRC3 Gene

Domains & Families for DRC3 Gene

Gene Families for DRC3 Gene

Protein Domains for DRC3 Gene

Suggested Antigen Peptide Sequences for DRC3 Gene

Graphical View of Domain Structure for InterPro Entry

Q9H069

UniProtKB/Swiss-Prot:

DRC3_HUMAN :
  • Contains 1 LRRCT domain.
  • Belongs to the DRC3 family.
  • Contains 5 LRR (leucine-rich) repeats.
Domain:
  • Contains 1 LRRCT domain.
Family:
  • Belongs to the DRC3 family.
Similarity:
  • Contains 5 LRR (leucine-rich) repeats.
genes like me logo Genes that share domains with DRC3: view

Function for DRC3 Gene

Molecular function for DRC3 Gene

UniProtKB/Swiss-Prot Function:
Key component of the nexin-dynein regulatory complex (N-DRC), a key regulator of ciliary motility.

Phenotypes for DRC3 Gene

GenomeRNAi human phenotypes for DRC3:
genes like me logo Genes that share phenotypes with DRC3: view

Animal Model Products

Inhibitory RNA Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DRC3 Gene

Localization for DRC3 Gene

Subcellular locations from UniProtKB/Swiss-Prot for DRC3 Gene

Cytoplasm, cytoskeleton, cilium axoneme.

Gene Ontology (GO) - Cellular Components for DRC3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IDA --
GO:0005856 cytoskeleton IEA --
GO:0005930 axoneme IDA 26387594
GO:0042995 cell projection IEA --
genes like me logo Genes that share ontologies with DRC3: view

No data available for Subcellular locations from COMPARTMENTS for DRC3 Gene

Pathways & Interactions for DRC3 Gene

SuperPathways for DRC3 Gene

No Data Available

Interacting Proteins for DRC3 Gene

Gene Ontology (GO) - Biological Process for DRC3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DRC3 Gene

Transcripts for DRC3 Gene

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for DRC3 Gene

No ASD Table

Relevant External Links for DRC3 Gene

GeneLoc Exon Structure for
DRC3
ECgene alternative splicing isoforms for
DRC3

Expression for DRC3 Gene

NURSA nuclear receptor signaling pathways regulating expression of DRC3 Gene:

DRC3
genes like me logo Genes that share expression patterns with DRC3: view

Primer Products

No data available for mRNA expression in normal human tissues , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for DRC3 Gene

Orthologs for DRC3 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for DRC3 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LRRC48 34 35
  • 99.04 (n)
cow
(Bos Taurus)
Mammalia LRRC48 34 35
  • 85.92 (n)
dog
(Canis familiaris)
Mammalia LRRC48 34 35
  • 85.79 (n)
mouse
(Mus musculus)
Mammalia Lrrc48 35 16 34
  • 83.43 (n)
OneToOne
rat
(Rattus norvegicus)
Mammalia Lrrc48 34
  • 82.92 (n)
oppossum
(Monodelphis domestica)
Mammalia LRRC48 35
  • 67 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia LRRC48 35
  • 67 (a)
OneToOne
chicken
(Gallus gallus)
Aves LRRC48 35 34
  • 62.94 (n)
OneToOne
lizard
(Anolis carolinensis)
Reptilia LRRC48 35
  • 57 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia lrrc48 34
  • 64.41 (n)
zebrafish
(Danio rerio)
Actinopterygii lrrc48 34 35
  • 59.21 (n)
fruit fly
(Drosophila melanogaster)
Insecta Ppr-Y 34 35
  • 46 (n)
TbCMF46 35
  • 30 (a)
OneToMany
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP010129 34
  • 45.69 (n)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes SDS22 35
  • 17 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 35
  • 52 (a)
OneToOne
Species where no ortholog for DRC3 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for DRC3 Gene

ENSEMBL:
Gene Tree for DRC3 (if available)
TreeFam:
Gene Tree for DRC3 (if available)

Paralogs for DRC3 Gene

Paralogs for DRC3 Gene

genes like me logo Genes that share paralogs with DRC3: view

Variants for DRC3 Gene

Sequence variations from dbSNP and Humsavar for DRC3 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs10558401 -- 18,000,192(+) CTTTC(-/CT)CTGTG intron-variant
rs11078408 -- 17,972,697(+) GACAA(A/G)AGACG upstream-variant-2KB
rs11078409 -- 17,972,982(+) GAGAC(C/G)TGGGA intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs111309590 -- 17,995,065(+) CAGAG(A/G)GCAAC nc-transcript-variant, reference, missense
rs111336401 -- 17,984,742(+) CCCCA(C/T)GCCTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DRC3 Gene

Variant ID Type Subtype PubMed ID
esv2668379 CNV deletion 23128226
esv3640139 CNV loss 21293372
nsv1132448 CNV duplication 24896259
nsv155 OTHER inversion 15895083
nsv499114 OTHER inversion 21111241
nsv510701 CNV deletion 20534489
nsv960428 CNV duplication 23825009

Variation tolerance for DRC3 Gene

Residual Variation Intolerance Score: 86.5% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.29; 62.80% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for DRC3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DRC3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for DRC3 Gene

Disorders for DRC3 Gene

MalaCards: The human disease database

(1) MalaCards diseases for DRC3 Gene - From: GeneCards

Disorder Aliases PubMed IDs
primary ciliary dyskinesia
  • ciliary motility disorder
- elite association - COSMIC cancer census association via MalaCards
Search DRC3 in MalaCards View complete list of genes associated with diseases

Relevant External Links for DRC3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DRC3
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DRC3
genes like me logo Genes that share disorders with DRC3: view

No data available for UniProtKB/Swiss-Prot and Genatlas for DRC3 Gene

Publications for DRC3 Gene

  1. The nexin-dynein regulatory complex subunit DRC1 is essential for motile cilia function in algae and humans. (PMID: 23354437) Wirschell M. … Omran H. (Nat. Genet. 2013) 2 3 4 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  4. Genes in a refined Smith-Magenis syndrome critical deletion interval on chromosome 17p11.2 and the syntenic region of the mouse. (PMID: 11997338) Bi W. … Lupski J.R. (Genome Res. 2002) 2 3 64
  5. Towards a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs. (PMID: 11230166) Wiemann S. … Poustka A. (Genome Res. 2001) 3 4 64

Products for DRC3 Gene

Sources for DRC3 Gene

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