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Aliases for DPYD-IT1 Gene

Subcategory (RNA class) for DPYD-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DPYD-IT1 Gene

  • DPYD Intronic Transcript 1 2 3 5
  • DPYD Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for DPYD-IT1 Gene

Previous GeneCards Identifiers for DPYD-IT1 Gene

  • GC00U933335
  • GC01M097860

Summaries for DPYD-IT1 Gene

GeneCards Summary for DPYD-IT1 Gene

DPYD-IT1 (DPYD Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DPYD-IT1 Gene

Genomics for DPYD-IT1 Gene

Regulatory Elements for DPYD-IT1 Gene

Enhancers for DPYD-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G097432 0.6 ENCODE 0.4 -13.3 -13312 1.0 JUND SMARCA4 CEBPB FOS CEBPG FOXP2 RAD21 DPYD-IT1 SEC63P1
GH01G097383 0.7 ENCODE 0.3 +35.7 35742 1.8 SMARCC1 MTA2 JUN CEBPB EP300 BRCA1 RFX5 JUND SMARCA4 GATA2 DPYD DPYD-IT1 LOC105378867
GH01G097489 0.6 ENCODE 0.2 -69.9 -69879 0.2 JUN CEBPB CEBPG HMG20A EP300 JUND CEBPA STAT3 FOS HOMEZ SEC63P1 DPYD-IT1
GH01G097529 0.4 FANTOM5 0.1 -109.2 -109198 0.4 ZNF366 SEC63P1 DPYD-IT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DPYD-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for DPYD-IT1 Gene

Chromosome:
1
Start:
97,394,154 bp from pter
End:
97,420,141 bp from pter
Size:
25,988 bases
Orientation:
Minus strand

Genomic View for DPYD-IT1 Gene

Genes around DPYD-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DPYD-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DPYD-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for DPYD-IT1 Gene

Proteins for DPYD-IT1 Gene

Post-translational modifications for DPYD-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DPYD-IT1 Gene

Domains & Families for DPYD-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DPYD-IT1 Gene

Function for DPYD-IT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DPYD-IT1 Gene

Localization for DPYD-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DPYD-IT1 Gene

Pathways & Interactions for DPYD-IT1 Gene

SuperPathways for DPYD-IT1 Gene

No Data Available

Interacting Proteins for DPYD-IT1 Gene

Gene Ontology (GO) - Biological Process for DPYD-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DPYD-IT1 Gene

Drugs & Compounds for DPYD-IT1 Gene

No Compound Related Data Available

Transcripts for DPYD-IT1 Gene

mRNA/cDNA for DPYD-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DPYD-IT1 Gene

No ASD Table

Relevant External Links for DPYD-IT1 Gene

GeneLoc Exon Structure for
DPYD-IT1
ECgene alternative splicing isoforms for
DPYD-IT1

Expression for DPYD-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DPYD-IT1 Gene

genes like me logo Genes that share expression patterns with DPYD-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DPYD-IT1 Gene

Orthologs for DPYD-IT1 Gene

Evolution for DPYD-IT1 Gene

ENSEMBL:
Gene Tree for DPYD-IT1 (if available)
TreeFam:
Gene Tree for DPYD-IT1 (if available)

No data available for Orthologs for DPYD-IT1 Gene

Paralogs for DPYD-IT1 Gene

No data available for Paralogs for DPYD-IT1 Gene

Variants for DPYD-IT1 Gene

Relevant External Links for DPYD-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DPYD-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DPYD-IT1 Gene

Disorders for DPYD-IT1 Gene

No disorders were found for DPYD-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for DPYD-IT1 Gene

Publications for DPYD-IT1 Gene

No publications were found for DPYD-IT1 Gene.

Products for DPYD-IT1 Gene

Sources for DPYD-IT1 Gene

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