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Aliases for DPYD-IT1 Gene

Subcategory (RNA class) for DPYD-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DPYD-IT1 Gene

  • DPYD Intronic Transcript 1 2 3 5
  • DPYD Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for DPYD-IT1 Gene

Previous GeneCards Identifiers for DPYD-IT1 Gene

  • GC00U933335
  • GC01M097860

Summaries for DPYD-IT1 Gene

GeneCards Summary for DPYD-IT1 Gene

DPYD-IT1 (DPYD Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for DPYD-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DPYD-IT1 Gene

Genomics for DPYD-IT1 Gene

GeneHancer (GH) Regulatory Elements for DPYD-IT1 Gene

Promoters and enhancers for DPYD-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I097432 Enhancer 0.5 ENCODE 0.4 -13.3 -13311 1 JUND POLR2A CEBPB FOXP2 FOS CEBPG DPYD-IT1 SEC63P1 DPYD
GH01I097383 Enhancer 0.6 ENCODE 0.3 +35.7 35741 1.8 SMARCC1 JUN CEBPB EP300 BRCA1 RFX5 ZNF217 JUND SMARCA4 STAT3 DPYD DPYD-IT1 LOC105378867
GH01I097451 Enhancer 0.4 UCNEbase 0.3 -31.1 -31078 0.3 DPYD-IT1 SEC63P1 DPYD
GH01I097489 Enhancer 0.6 ENCODE 0.2 -69.9 -69879 0.2 JUN CEBPB CEBPG HMG20A JUND CEBPA STAT3 FOSL2 HOMEZ SEC63P1 DPYD-IT1 DPYD
GH01I097529 Enhancer 0.4 FANTOM5 0.1 -109.2 -109197 0.4 ZNF366 SEC63P1 DPYD-IT1 DPYD
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around DPYD-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DPYD-IT1 Gene

Genomic Locations for DPYD-IT1 Gene
chr1:97,394,154-97,420,141
(GRCh38/hg38)
Size:
25,988 bases
Orientation:
Minus strand
chr1:97,859,710-97,885,697
(GRCh37/hg19)

Genomic View for DPYD-IT1 Gene

Genes around DPYD-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DPYD-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DPYD-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for DPYD-IT1 Gene

Proteins for DPYD-IT1 Gene

Post-translational modifications for DPYD-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DPYD-IT1 Gene

Domains & Families for DPYD-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DPYD-IT1 Gene

Function for DPYD-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DPYD-IT1 Gene

Localization for DPYD-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DPYD-IT1 Gene

Pathways & Interactions for DPYD-IT1 Gene

SuperPathways for DPYD-IT1 Gene

No Data Available

Interacting Proteins for DPYD-IT1 Gene

Gene Ontology (GO) - Biological Process for DPYD-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DPYD-IT1 Gene

Drugs & Compounds for DPYD-IT1 Gene

No Compound Related Data Available

Transcripts for DPYD-IT1 Gene

mRNA/cDNA for DPYD-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for DPYD-IT1 Gene

No ASD Table

Relevant External Links for DPYD-IT1 Gene

GeneLoc Exon Structure for
DPYD-IT1
ECgene alternative splicing isoforms for
DPYD-IT1

Expression for DPYD-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DPYD-IT1 Gene

genes like me logo Genes that share expression patterns with DPYD-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DPYD-IT1 Gene

Orthologs for DPYD-IT1 Gene

Evolution for DPYD-IT1 Gene

ENSEMBL:
Gene Tree for DPYD-IT1 (if available)
TreeFam:
Gene Tree for DPYD-IT1 (if available)

No data available for Orthologs for DPYD-IT1 Gene

Paralogs for DPYD-IT1 Gene

No data available for Paralogs for DPYD-IT1 Gene

Variants for DPYD-IT1 Gene

Additional Variant Information for DPYD-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DPYD-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DPYD-IT1 Gene

Disorders for DPYD-IT1 Gene

No disorders were found for DPYD-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for DPYD-IT1 Gene

Publications for DPYD-IT1 Gene

No publications were found for DPYD-IT1 Gene.

Products for DPYD-IT1 Gene

Sources for DPYD-IT1 Gene

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