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Aliases for DPY19L2P4 Gene

Aliases for DPY19L2P4 Gene

  • DPY19L2 Pseudogene 4 2 3 5
  • Dpy-19-Like 2 Pseudogene 4 (C. Elegans) 2

External Ids for DPY19L2P4 Gene

Previous GeneCards Identifiers for DPY19L2P4 Gene

  • GC07U901549
  • GC07P089587
  • GC07P089748
  • GC07P084359

Summaries for DPY19L2P4 Gene

GeneCards Summary for DPY19L2P4 Gene

DPY19L2P4 (DPY19L2 Pseudogene 4) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DPY19L2P4 Gene

Genomics for DPY19L2P4 Gene

Regulatory Elements for DPY19L2P4 Gene

Enhancers for DPY19L2P4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G090455 0.9 Ensembl ENCODE 8.1 +336.1 336070 0.5 CTCF ZNF654 TRIM22 REST RAD21 YY1 GATA3 SMC3 DPY19L2P4 GTPBP10 STEAP1 CDK14 GC07M090434
GH07G090473 0.5 ENCODE 8.4 +355.1 355110 2.1 JUND JUN FOS EBF1 GTPBP10 DPY19L2P4 ENSG00000223969 ENSG00000251154 GC07P090503
GH07G091084 0.2 ENCODE 4.2 +966.1 966083 1.0 DPY19L2P4 PTP4A1P3 GC07P091004
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DPY19L2P4 on UCSC Golden Path with GeneCards custom track

Promoters for DPY19L2P4 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000214873 -99 199 MXI1 FOXA2 RFX1 NRF1 ZNF398 BMI1 ZBTB26 EZH2

Genomic Location for DPY19L2P4 Gene

Chromosome:
7
Start:
90,119,400 bp from pter
End:
90,125,600 bp from pter
Size:
6,201 bases
Orientation:
Plus strand

Genomic View for DPY19L2P4 Gene

Genes around DPY19L2P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DPY19L2P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DPY19L2P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DPY19L2P4 Gene

Proteins for DPY19L2P4 Gene

Post-translational modifications for DPY19L2P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DPY19L2P4 Gene

Domains & Families for DPY19L2P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DPY19L2P4 Gene

Function for DPY19L2P4 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DPY19L2P4 Gene

Localization for DPY19L2P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DPY19L2P4 Gene

Pathways & Interactions for DPY19L2P4 Gene

SuperPathways for DPY19L2P4 Gene

No Data Available

Interacting Proteins for DPY19L2P4 Gene

Gene Ontology (GO) - Biological Process for DPY19L2P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DPY19L2P4 Gene

Drugs & Compounds for DPY19L2P4 Gene

No Compound Related Data Available

Transcripts for DPY19L2P4 Gene

mRNA/cDNA for DPY19L2P4 Gene

(6) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DPY19L2P4 Gene

Dpy-19-like 2 pseudogene 4 (C. elegans):
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for DPY19L2P4 Gene

No ASD Table

Relevant External Links for DPY19L2P4 Gene

GeneLoc Exon Structure for
DPY19L2P4
ECgene alternative splicing isoforms for
DPY19L2P4

Expression for DPY19L2P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DPY19L2P4 Gene

mRNA differential expression in normal tissues according to GTEx for DPY19L2P4 Gene

This gene is overexpressed in Testis (x5.7) and Brain - Cerebellar Hemisphere (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of DPY19L2P4 Gene:

DPY19L2P4

SOURCE GeneReport for Unigene cluster for DPY19L2P4 Gene:

Hs.406964
genes like me logo Genes that share expression patterns with DPY19L2P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DPY19L2P4 Gene

Orthologs for DPY19L2P4 Gene

Evolution for DPY19L2P4 Gene

ENSEMBL:
Gene Tree for DPY19L2P4 (if available)
TreeFam:
Gene Tree for DPY19L2P4 (if available)

No data available for Orthologs for DPY19L2P4 Gene

Paralogs for DPY19L2P4 Gene

No data available for Paralogs for DPY19L2P4 Gene

Variants for DPY19L2P4 Gene

Sequence variations from dbSNP and Humsavar for DPY19L2P4 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000116232 -- 90,120,042(+) AGAGA(G/T)AGGGA intron-variant
rs1000174796 -- 90,125,554(+) ATATA(A/T)GTTTG intron-variant, nc-transcript-variant
rs1002000009 -- 90,120,434(+) GCTTC(A/T)GTCAC intron-variant
rs1002137451 -- 90,120,673(+) AAATA(A/G)GATAC intron-variant
rs1003002179 -- 90,121,704(+) ATACT(C/G)TATAT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DPY19L2P4 Gene

Variant ID Type Subtype PubMed ID
dgv11493n54 CNV gain 21841781
dgv6525n100 CNV gain 25217958
dgv6529n100 CNV gain 25217958
esv2668491 CNV deletion 23128226
esv2752188 CNV gain 17911159
esv2759545 CNV gain 17122850
esv3576402 CNV gain 25503493
esv3614094 CNV loss 21293372
nsv1034468 CNV gain 25217958
nsv464626 CNV gain 19166990
nsv515997 CNV gain+loss 19592680
nsv970549 CNV duplication 23825009
nsv970903 CNV duplication 23825009
nsv970904 CNV duplication 23825009

Relevant External Links for DPY19L2P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DPY19L2P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DPY19L2P4 Gene

Disorders for DPY19L2P4 Gene

Relevant External Links for DPY19L2P4

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DPY19L2P4

No disorders were found for DPY19L2P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DPY19L2P4 Gene

Publications for DPY19L2P4 Gene

  1. A genome-wide search for quantitative trait loci affecting the cortical surface area and thickness of Heschl's gyrus. (PMID: 25130324) Cai D.C. … Hagoort P. (Genes Brain Behav. 2014) 3 64
  2. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3 64
  3. Duplication and relocation of the functional DPY19L2 gene within low copy repeats. (PMID: 16526957) Carson A.R. … Scherer S.W. (BMC Genomics 2006) 3 64
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for DPY19L2P4 Gene

Sources for DPY19L2P4 Gene

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