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Aliases for DPY19L2P2 Gene

Aliases for DPY19L2P2 Gene

  • DPY19L2 Pseudogene 2 2 3 5
  • Dpy-19-Like 2 Pseudogene 2 (C. Elegans) 2
  • Dpy-19-Like Protein 2 Pseudogene 2 4
  • Protein Dpy-19 Homolog 2-Like 2 4
  • EC 2.4.1.- 4

External Ids for DPY19L2P2 Gene

Previous GeneCards Identifiers for DPY19L2P2 Gene

  • GC07U901548
  • GC07M102603
  • GC07M102815
  • GC07M097177

Summaries for DPY19L2P2 Gene

GeneCards Summary for DPY19L2P2 Gene

DPY19L2P2 (DPY19L2 Pseudogene 2) is a Pseudogene.

UniProtKB/Swiss-Prot for DPY19L2P2 Gene

  • Probable C-mannosyltransferase that mediates C-mannosylation of tryptophan residues on target proteins.

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DPY19L2P2 Gene

Genomics for DPY19L2P2 Gene

Regulatory Elements for DPY19L2P2 Gene

Enhancers for DPY19L2P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G103146 1.7 FANTOM5 ENCODE dbSUPER 12.9 +130.8 130803 7.3 CREB3L1 DMAP1 YY1 SLC30A9 ZNF143 SP3 TBX21 MEF2D ZNF610 GLIS1 RPL23AP95 NAPEPLD DPY19L2P2 PMPCB RASA4DP ARMC10 LOC105375434
GH07G102978 1.4 Ensembl ENCODE dbSUPER 12.1 +301.9 301881 1.0 ATF1 CREB3L1 TCF12 FOS ZNF592 MAFF SMARCA4 STAT3 ZNF112 BACH1 PRKRIP1 DPY19L2P2 ENSG00000213385 NFE4 GC07P103004
GH07G103280 1 ENCODE 11.4 +0.2 228 1.9 HDGF PKNOX1 ZNF493 ARID4B SIN3A GLI4 ZNF2 GLIS2 ZNF263 ZNF202 ENSG00000239486 DPY19L2P2 PRKRIP1 NAPEPLD PIR51246
GH07G102912 1.7 FANTOM5 Ensembl ENCODE dbSUPER 6.5 +365.2 365159 6.0 ELF3 CTCF PKNOX1 JUN SIN3A RAD21 ZNF316 ZNF366 POLR2A ZNF547 RNU6-1136P FBXL13 DPY19L2P2 ARMC10 LRRC17 RASA4 RPL23AP95 NFE4
GH07G102838 1 ENCODE 10 +441.8 441789 1.3 FOXA2 MLX ARID4B SIN3A GLIS2 ZNF143 ZNF207 SP3 SP5 YY2 DPY19L2P2 LRWD1 RNU6-1136P RN7SKP198
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DPY19L2P2 on UCSC Golden Path with GeneCards custom track

Promoters for DPY19L2P2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000216205 166 1801 HDGF PKNOX1 ZNF493 ARID4B SIN3A GLI4 ZNF2 GLIS2 ZNF263 ZNF202

Genomic Location for DPY19L2P2 Gene

Chromosome:
7
Start:
103,175,013 bp from pter
End:
103,280,466 bp from pter
Size:
105,454 bases
Orientation:
Minus strand

Genomic View for DPY19L2P2 Gene

Genes around DPY19L2P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DPY19L2P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DPY19L2P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DPY19L2P2 Gene

Proteins for DPY19L2P2 Gene

  • Protein details for DPY19L2P2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZN68-D19P2_HUMAN
    Recommended name:
    Putative C-mannosyltransferase DPY19L2P2
    Protein Accession:
    Q6ZN68
    Secondary Accessions:
    • Q8N9V4
    • Q8ND62

    Protein attributes for DPY19L2P2 Gene

    Size:
    376 amino acids
    Molecular mass:
    43060 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for DPY19L2P2 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for DPY19L2P2 Gene

Post-translational modifications for DPY19L2P2 Gene

No data available for DME Specific Peptides for DPY19L2P2 Gene

Domains & Families for DPY19L2P2 Gene

Protein Domains for DPY19L2P2 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for DPY19L2P2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q6ZN68

UniProtKB/Swiss-Prot:

D19P2_HUMAN :
  • Belongs to the dpy-19 family.
Family:
  • Belongs to the dpy-19 family.
genes like me logo Genes that share domains with DPY19L2P2: view

No data available for Gene Families for DPY19L2P2 Gene

Function for DPY19L2P2 Gene

Molecular function for DPY19L2P2 Gene

UniProtKB/Swiss-Prot Function:
Probable C-mannosyltransferase that mediates C-mannosylation of tryptophan residues on target proteins.

Enzyme Numbers (IUBMB) for DPY19L2P2 Gene

Gene Ontology (GO) - Molecular Function for DPY19L2P2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000030 mannosyltransferase activity IBA --
genes like me logo Genes that share ontologies with DPY19L2P2: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DPY19L2P2 Gene

Localization for DPY19L2P2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for DPY19L2P2 Gene

Membrane; Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for DPY19L2P2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005637 nuclear inner membrane IBA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with DPY19L2P2: view

No data available for Subcellular locations from COMPARTMENTS for DPY19L2P2 Gene

Pathways & Interactions for DPY19L2P2 Gene

SuperPathways for DPY19L2P2 Gene

No Data Available

Interacting Proteins for DPY19L2P2 Gene

Gene Ontology (GO) - Biological Process for DPY19L2P2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007286 spermatid development IBA --
GO:0018406 protein C-linked glycosylation via 2-alpha-mannosyl-L-tryptophan IBA --
genes like me logo Genes that share ontologies with DPY19L2P2: view

No data available for Pathways by source and SIGNOR curated interactions for DPY19L2P2 Gene

Drugs & Compounds for DPY19L2P2 Gene

No Compound Related Data Available

Transcripts for DPY19L2P2 Gene

mRNA/cDNA for DPY19L2P2 Gene

Unigene Clusters for DPY19L2P2 Gene

Dpy-19-like 2 pseudogene 2 (C. elegans):
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for DPY19L2P2 Gene

No ASD Table

Relevant External Links for DPY19L2P2 Gene

GeneLoc Exon Structure for
DPY19L2P2
ECgene alternative splicing isoforms for
DPY19L2P2

Expression for DPY19L2P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DPY19L2P2 Gene

mRNA differential expression in normal tissues according to GTEx for DPY19L2P2 Gene

This gene is overexpressed in Testis (x20.0).

NURSA nuclear receptor signaling pathways regulating expression of DPY19L2P2 Gene:

DPY19L2P2

SOURCE GeneReport for Unigene cluster for DPY19L2P2 Gene:

Hs.732579

mRNA Expression by UniProt/SwissProt for DPY19L2P2 Gene:

Q6ZN68-D19P2_HUMAN
Tissue specificity: Fibroblast, lung, lymphoblast, spleen and testis.
genes like me logo Genes that share expression patterns with DPY19L2P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DPY19L2P2 Gene

Orthologs for DPY19L2P2 Gene

Evolution for DPY19L2P2 Gene

ENSEMBL:
Gene Tree for DPY19L2P2 (if available)
TreeFam:
Gene Tree for DPY19L2P2 (if available)

No data available for Orthologs for DPY19L2P2 Gene

Paralogs for DPY19L2P2 Gene

(2) SIMAP similar genes for DPY19L2P2 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with DPY19L2P2: view

No data available for Paralogs for DPY19L2P2 Gene

Variants for DPY19L2P2 Gene

Sequence variations from dbSNP and Humsavar for DPY19L2P2 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000008674 -- 103,253,068(+) ATAGT(A/G)TCTTT intron-variant
rs1000019969 -- 103,260,848(+) CTTTC(C/T)GGATG intron-variant
rs1000125074 -- 103,216,940(+) AGGAA(A/G)TTTTG intron-variant
rs1000175007 -- 103,193,022(+) GGGGG(A/T)GGAGG intron-variant
rs1000273408 -- 103,244,760(+) CACCG(A/G)GCATG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DPY19L2P2 Gene

Variant ID Type Subtype PubMed ID
esv2673257 CNV deletion 23128226
esv2734953 CNV deletion 23290073
esv2761352 CNV loss 21179565
esv3614370 CNV loss 21293372
esv3614371 CNV loss 21293372
esv3614373 CNV loss 21293372
nsv1031395 CNV loss 25217958
nsv1137589 CNV deletion 24896259
nsv499230 CNV loss 21111241
nsv831084 CNV gain 17160897
nsv970566 CNV duplication 23825009
nsv970567 CNV duplication 23825009
nsv970924 CNV duplication 23825009
nsv981567 CNV duplication 23825009

Relevant External Links for DPY19L2P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DPY19L2P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DPY19L2P2 Gene

Disorders for DPY19L2P2 Gene

Relevant External Links for DPY19L2P2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DPY19L2P2

No disorders were found for DPY19L2P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DPY19L2P2 Gene

Publications for DPY19L2P2 Gene

  1. Duplication and relocation of the functional DPY19L2 gene within low copy repeats. (PMID: 16526957) Carson A.R. … Scherer S.W. (BMC Genomics 2006) 3 4 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  3. The full-ORF clone resource of the German cDNA consortium. (PMID: 17974005) Bechtel S. … Schupp I. (BMC Genomics 2007) 4 64
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for DPY19L2P2 Gene

Sources for DPY19L2P2 Gene

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