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Aliases for DPY19L2P1 Gene

Aliases for DPY19L2P1 Gene

  • DPY19L2 Pseudogene 1 2 3
  • Dpy-19-Like 2 Pseudogene 1 (C. Elegans) 2
  • Dpy-19-Like Protein 2 Pseudogene 1 4
  • Protein Dpy-19 Homolog 2-Like 1 4
  • EC 2.4.1.- 4

External Ids for DPY19L2P1 Gene

Summaries for DPY19L2P1 Gene

GeneCards Summary for DPY19L2P1 Gene

DPY19L2P1 (DPY19L2 Pseudogene 1) is a Pseudogene. GO annotations related to this gene include transferase activity, transferring glycosyl groups.

UniProtKB/Swiss-Prot for DPY19L2P1 Gene

  • Probable C-mannosyltransferase that mediates C-mannosylation of tryptophan residues on target proteins.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DPY19L2P1 Gene

Genomics for DPY19L2P1 Gene

Genomic Location for DPY19L2P1 Gene

Start:
35,079,989 bp from pter
End:
35,186,162 bp from pter
Size:
106,174 bases
Orientation:
Minus strand

Genomic View for DPY19L2P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DPY19L2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DPY19L2P1 Gene

Regulatory Elements for DPY19L2P1 Gene

Proteins for DPY19L2P1 Gene

  • Protein details for DPY19L2P1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6NXN4-D19P1_HUMAN
    Recommended name:
    Putative C-mannosyltransferase DPY19L2P1
    Protein Accession:
    Q6NXN4
    Secondary Accessions:
    • B4E2E3

    Protein attributes for DPY19L2P1 Gene

    Size:
    242 amino acids
    Molecular mass:
    28036 Da
    Quaternary structure:
    No Data Available
    Miscellaneous:
    • It has been suggested that DPY19L2P1 is an inactive pseudogene from which DPY19L2 has evolved by duplication. However, expressed transcript sequences derived from the DPY19L2P1 locus are known to exist

neXtProt entry for DPY19L2P1 Gene

Proteomics data for DPY19L2P1 Gene at MOPED

Post-translational modifications for DPY19L2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DPY19L2P1 Gene

Domains for DPY19L2P1 Gene

Protein Domains for DPY19L2P1 Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

D19P1_HUMAN
Family:
  • Belongs to the dpy-19 family.:
    • Q6NXN4
genes like me logo Genes that share domains with DPY19L2P1: view

No data available for Gene Families for DPY19L2P1 Gene

Function for DPY19L2P1 Gene

Molecular function for DPY19L2P1 Gene

UniProtKB/Swiss-Prot Function: Probable C-mannosyltransferase that mediates C-mannosylation of tryptophan residues on target proteins.

Enzyme Numbers (IUBMB) for DPY19L2P1 Gene

Gene Ontology (GO) - Molecular Function for DPY19L2P1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016757 transferase activity, transferring glycosyl groups IEA --
genes like me logo Genes that share ontologies with DPY19L2P1: view

No data available for Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DPY19L2P1 Gene

Localization for DPY19L2P1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for DPY19L2P1 Gene

Membrane; Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for DPY19L2P1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with DPY19L2P1: view

Pathways for DPY19L2P1 Gene

SuperPathways for DPY19L2P1 Gene

No Data Available

Interacting Proteins for DPY19L2P1 Gene

Gene Ontology (GO) - Biological Process for DPY19L2P1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007286 spermatid development IEA --
GO:0008152 metabolic process IEA --
genes like me logo Genes that share ontologies with DPY19L2P1: view

No data available for Pathways by source for DPY19L2P1 Gene

Transcripts for DPY19L2P1 Gene

mRNA/cDNA for DPY19L2P1 Gene

(6) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DPY19L2P1 Gene

Dpy-19-like 2 pseudogene 1 (C. elegans):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DPY19L2P1 Gene

No ASD Table

Relevant External Links for DPY19L2P1 Gene

GeneLoc Exon Structure for
DPY19L2P1
ECgene alternative splicing isoforms for
DPY19L2P1

Expression for DPY19L2P1 Gene

mRNA expression in normal human tissues for DPY19L2P1 Gene

mRNA differential expression in normal tissues according to GTEx for DPY19L2P1 Gene

This gene is overexpressed in Heart - Left Ventricle (9.0) and Heart - Atrial Appendage (8.2).

SOURCE GeneReport for Unigene cluster for DPY19L2P1 Gene Hs.594815

mRNA Expression by UniProt/SwissProt for DPY19L2P1 Gene

Q6NXN4-D19P1_HUMAN
Tissue specificity: Brain, heart, placenta and testis.
genes like me logo Genes that share expressions with DPY19L2P1: view

Orthologs for DPY19L2P1 Gene

Evolution for DPY19L2P1 Gene

ENSEMBL:
Gene Tree for DPY19L2P1 (if available)
TreeFam:
Gene Tree for DPY19L2P1 (if available)

No data available for Orthologs for DPY19L2P1 Gene

Paralogs for DPY19L2P1 Gene

Selected SIMAP similar genes for DPY19L2P1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with DPY19L2P1: view

No data available for Paralogs for DPY19L2P1 Gene

Variants for DPY19L2P1 Gene

Sequence variations from dbSNP and Humsavar for DPY19L2P1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs1207905 -- 35,104,810(+) CATAT(G/T)TTTAA intron-variant
rs1207906 -- 35,112,156(+) agggg(A/C)tgaga intron-variant
rs1207907 -- 35,120,603(+) ggcat(A/G)gtctc intron-variant
rs1207908 -- 35,151,755(+) AGCAA(C/G)GACCA intron-variant
rs1207909 -- 35,152,538(+) aactg(A/G)gaggc intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DPY19L2P1 Gene

Variant ID Type Subtype PubMed ID
nsv830953 CNV Gain 17160897

Relevant External Links for DPY19L2P1 Gene

HapMap Linkage Disequilibrium report
DPY19L2P1

Disorders for DPY19L2P1 Gene

No disorders were found for DPY19L2P1 Gene.

No data available for UniProtKB/Swiss-Prot for DPY19L2P1 Gene

Publications for DPY19L2P1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4
  4. Duplication and relocation of the functional DPY19L2 gene within low copy repeats. (PMID: 16526957) Carson A.R. … Scherer S.W. (BMC Genomics 2006) 4

Products for DPY19L2P1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate DPY19L2P1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for DPY19L2P1
    • Block miRNA regulation of DPY19L2P1 using miScript Target Protectors

    Sources for DPY19L2P1 Gene

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